ldsc/setup.py at main · CBIIT/ldsc · GitHub

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from setuptools import setup

#setup(name='ldsc',
#      version='1.0',
#      description='LD Score Regression (LDSC)',
#      url='http://github.com/bulik/ldsc',
#      author='Brendan Bulik-Sullivan and Hilary Finucane',
#      author_email='',
#      license='GPLv3',
#      packages=['ldscore'],
#      scripts=['ldsc.py', 'munge_sumstats.py'],
#      install_requires = [
#            'bitarray>=0.8,<0.9',
#            'nose>=1.3,<1.4',
#            'pybedtools>=0.7,<0.8',
#            'scipy>=0.18,<0.19',
#            'numpy>=1.16,<1.17',
#            'pandas>=0.20,<0.21'
#      ]
#)
from setuptools import setup

# read the contents of your README file
from pathlib import Path
this_directory = Path(__file__).parent
long_description = (this_directory / "README.md").read_text()

setup(name='ldsc',
      version='3.0.2',
      description='LD Score Regression (LDSC)',
      long_description=long_description,
      long_description_content_type='text/markdown',
      url='http://github.com/bulik/ldsc',
      author='Brendan Bulik-Sullivan and Hilary Finucane',
      author_email='',
      license='GPLv3',
      packages=['ldscore'],
      scripts=['ldsc.py', 'munge_sumstats.py', 'make_annot.py'],
      py_modules=['ldscore.ldsc_utils'],  # Add this line to include ldsc_utils.py
      install_requires = [
            'bitarray==2.6.0',
            'nose==1.3.7',
            'numpy==1.23.3',
            'pandas==1.5.0',
            'pybedtools==0.9.1',
            'pysam==0.19.1',
            'python-dateutil==2.8.2',
            'pytz==2022.4',
            'scipy==1.9.2',
            'six==1.16.0'
      ]
)