diff --git a/.cspell.json b/.cspell.json index 09513134..c1ee8158 100644 --- a/.cspell.json +++ b/.cspell.json @@ -25,6 +25,7 @@ "*.ico", ".editorconfig", ".envrc", + ".github/dependabot.yml", ".gitignore", ".pre-commit-config.yaml", ".prettierignore", @@ -40,7 +41,6 @@ "ignoreWords": [ "Autoupdate", "Dalitzplot", - "MAINT", "Minkowski", "PYDEVD", "adrs", @@ -53,6 +53,8 @@ "automodule", "axhline", "axvline", + "backend_nbagg", + "bbox", "bbox_to_anchor", "bdist", "bgcolor", @@ -71,7 +73,6 @@ "compwa", "concat", "conds", - "coolwarm", "displaystyle", "dlink", "docnb", @@ -109,6 +110,7 @@ "imag", "iplt", "ipykernel", + "ipympl", "ipyplot", "ipywidgets", "isfunction", @@ -171,9 +173,9 @@ "pylance", "pypi", "pyproject", - "pyright", "pytestconfig", "rankdir", + "relim", "repr", "richman", "rightarrow", @@ -189,10 +191,10 @@ "sympifiable", "sympified", "sympify", - "symplot", "theano", "ticklabels", "tolist", + "tqdm", "unparse", "unsrt", "untracked", @@ -211,6 +213,7 @@ "xticks", "xytext", "yaxis", + "ydata", "ylabel", "ylim", "yticks" @@ -267,7 +270,6 @@ "mathbb", "matplotlib", "Mikhasenko", - "mypy", "nishijima", "numpy", "parametrizations", diff --git a/.github/dependabot.yml b/.github/dependabot.yml new file mode 100644 index 00000000..1ef4490b --- /dev/null +++ b/.github/dependabot.yml @@ -0,0 +1,19 @@ +version: 2 + +multi-ecosystem-groups: + lock: + assignees: [redeboer] + commit-message: { prefix: MAINT } + schedule: { interval: quarterly } + +updates: + - package-ecosystem: github-actions + directory: "/" + labels: [⬆️ Lock] + multi-ecosystem-group: lock + patterns: ["*"] + - package-ecosystem: uv + directory: "/" + labels: [⬆️ Lock] + multi-ecosystem-group: lock + patterns: ["*"] diff --git a/.github/workflows/benchmark.yml b/.github/workflows/benchmark.yml index 7de8eab3..8bec17dc 100644 --- a/.github/workflows/benchmark.yml +++ b/.github/workflows/benchmark.yml @@ -12,45 +12,21 @@ on: - main - epic/* workflow_dispatch: - inputs: - specific-pip-packages: - description: Run benchmarks with specific pip packages - required: false - type: string jobs: benchmark: name: Performance regression runs-on: ubuntu-24.04 steps: - - uses: actions/checkout@v4 + - uses: actions/checkout@v6 with: fetch-depth: 0 - - uses: actions/setup-python@v5 + - uses: actions/setup-python@v6 with: python-version: "3.13" - - uses: astral-sh/setup-uv@v5 - - id: with - if: inputs.specific-pip-packages - name: Determine additional packages to install - run: | - additional_packages='' - for package in ${{ inputs.specific-pip-packages }}; do - additional_packages="$additional_packages --with $package" - done - echo "packages=$additional_packages" | tee -a $GITHUB_OUTPUT + - uses: astral-sh/setup-uv@v7 - name: Run pytest-benchmark - run: | - uv run \ - --all-extras \ - --group test \ - --no-dev \ - ${{ steps.with.outputs.packages }} \ - pytest \ - -k benchmark \ - --benchmark-json output.json \ - --durations=0 - working-directory: benchmarks + run: uvx --from poethepoet poe benchmark - name: Warn on performance decrease if: github.event_name == 'pull_request' uses: benchmark-action/github-action-benchmark@v1 diff --git a/.github/workflows/cd.yml b/.github/workflows/cd.yml index 4e32c200..d1243746 100644 --- a/.github/workflows/cd.yml +++ b/.github/workflows/cd.yml @@ -9,9 +9,9 @@ on: jobs: milestone: if: startsWith(github.ref, 'refs/tags') - uses: ComPWA/actions/.github/workflows/close-milestone.yml@v3 + uses: ComPWA/actions/.github/workflows/close-milestone.yml@v4 package-name: - uses: ComPWA/actions/.github/workflows/get-pypi-name.yml@v3 + uses: ComPWA/actions/.github/workflows/get-pypi-name.yml@v4 pypi: environment: name: PyPI @@ -24,9 +24,9 @@ jobs: id-token: write runs-on: ubuntu-24.04 steps: - - uses: ComPWA/actions/build-pypi-distribution@v3 + - uses: ComPWA/actions/build-pypi-distribution@v4 - uses: pypa/gh-action-pypi-publish@release/v1 push: if: startsWith(github.ref, 'refs/tags') && !github.event.release.prerelease secrets: inherit - uses: ComPWA/actions/.github/workflows/push-to-version-branches.yml@v3 + uses: ComPWA/actions/.github/workflows/push-to-version-branches.yml@v4 diff --git a/.github/workflows/ci-qrules-v0.9.yml b/.github/workflows/ci-qrules-v0.9.yml index ebacedab..4a5db42c 100644 --- a/.github/workflows/ci-qrules-v0.9.yml +++ b/.github/workflows/ci-qrules-v0.9.yml @@ -22,13 +22,13 @@ jobs: name: Run unit tests runs-on: ubuntu-24.04 steps: - - uses: actions/checkout@v4 + - uses: actions/checkout@v6 with: fetch-depth: 0 - - uses: actions/setup-python@v5 + - uses: actions/setup-python@v6 with: python-version: "3.13" - - uses: astral-sh/setup-uv@v5 + - uses: astral-sh/setup-uv@v7 - name: Run pytest with QRules v0.9 run: | uv run \ diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 5e3819eb..eef6429e 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -17,31 +17,23 @@ on: - epic/* - "[0-9]+.[0-9]+.x" workflow_dispatch: - inputs: - specific-pip-packages: - description: Run CI with specific pip packages - required: false - type: string jobs: doc: - uses: ComPWA/actions/.github/workflows/ci-docs.yml@v3.0 + uses: ComPWA/actions/.github/workflows/ci-docs.yml@v4.0 permissions: pages: write id-token: write with: apt-packages: graphviz - specific-pip-packages: ${{ inputs.specific-pip-packages }} - pytest: - uses: ComPWA/actions/.github/workflows/pytest.yml@v3.0 - with: - coverage-target: ampform - macos-python-version: "3.10" - specific-pip-packages: ${{ inputs.specific-pip-packages }} - secrets: - CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} style: - if: inputs.specific-pip-packages == '' secrets: token: ${{ secrets.PAT }} - uses: ComPWA/actions/.github/workflows/pre-commit.yml@v3.0 + uses: ComPWA/actions/.github/workflows/style.yml@v4.0 + test: + uses: ComPWA/actions/.github/workflows/test.yml@v4.0 + secrets: + CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} + with: + coverage-python-version: "3.13" + macos-python-version: "3.10" diff --git a/.github/workflows/clean-caches.yml b/.github/workflows/clean-caches.yml index 2de0c959..1d3abcc7 100644 --- a/.github/workflows/clean-caches.yml +++ b/.github/workflows/clean-caches.yml @@ -14,9 +14,9 @@ on: jobs: cleanup: name: Remove caches - runs-on: ubuntu-24.04 + runs-on: ubuntu-slim steps: - - uses: ComPWA/actions/clean-caches@v3 + - uses: ComPWA/actions/clean-caches@v4 with: GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} ref: ${{ inputs.ref }} diff --git a/.github/workflows/lock.yml b/.github/workflows/lock.yml index 41aa0268..05fafad2 100644 --- a/.github/workflows/lock.yml +++ b/.github/workflows/lock.yml @@ -17,6 +17,6 @@ on: jobs: lock: - uses: ComPWA/actions/.github/workflows/lock.yml@v3 + uses: ComPWA/actions/.github/workflows/lock.yml@v4 secrets: token: ${{ secrets.PAT }} diff --git a/.github/workflows/pr-linting.yml b/.github/workflows/pr-linting.yml index 638dfc1e..e15b56f9 100644 --- a/.github/workflows/pr-linting.yml +++ b/.github/workflows/pr-linting.yml @@ -11,4 +11,4 @@ on: jobs: lint-pr: - uses: ComPWA/actions/.github/workflows/pr-linting.yml@v3 + uses: ComPWA/actions/.github/workflows/pr-linting.yml@v4 diff --git a/.github/workflows/redirect-gh-pages.yml b/.github/workflows/redirect-gh-pages.yml index c683f705..43997e23 100644 --- a/.github/workflows/redirect-gh-pages.yml +++ b/.github/workflows/redirect-gh-pages.yml @@ -7,7 +7,7 @@ on: jobs: build: - runs-on: ubuntu-24.04 + runs-on: ubuntu-slim steps: - name: Build redirect page id: build @@ -26,7 +26,7 @@ jobs: ' > build/index.html - id: deployment - uses: actions/upload-pages-artifact@v3 + uses: actions/upload-pages-artifact@v4 with: path: build/ diff --git a/.github/workflows/release-drafter.yml b/.github/workflows/release-drafter.yml index 32c6579c..67334ee7 100644 --- a/.github/workflows/release-drafter.yml +++ b/.github/workflows/release-drafter.yml @@ -9,7 +9,7 @@ on: jobs: update_release_draft: - runs-on: ubuntu-24.04 + runs-on: ubuntu-slim steps: - uses: release-drafter/release-drafter@v6 env: diff --git a/.gitignore b/.gitignore index 349ba591..75ea126f 100644 --- a/.gitignore +++ b/.gitignore @@ -25,7 +25,6 @@ version.py .coverage.* .ipynb_checkpoints/ .jupyter_ystore.db -.mypy*/ .pytest_cache/ .virtual_documents/ __pycache__/ @@ -50,4 +49,3 @@ pyvenv*/ !.vscode/*.json !.zenodo.json !codecov.yml -!pyrightconfig.json diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index a9cc5047..b3224b0f 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,11 +1,9 @@ ci: autofix_commit_msg: "MAINT: implement pre-commit autofixes" autoupdate_commit_msg: "MAINT: upgrade lock files" - autoupdate_schedule: quarterly skip: - check-jsonschema - - mypy - - pyright + - ty - uv-lock repos: @@ -15,26 +13,24 @@ repos: - id: check-useless-excludes - repo: https://github.com/ComPWA/policy - rev: 0.7.3 + rev: 0.8.2rc18 hooks: - id: check-dev-files args: - --doc-apt-packages=graphviz - --repo-name=ampform - --repo-title=AmpForm - - --update-lock-files=outsource + - --type-checker=ty - id: colab-toc-visible - id: fix-nbformat-version - id: remove-empty-tags - id: set-nb-cells - args: - - --add-install-cell - - --additional-packages=IPython - - --extras-require=doc,viz + args: [--autolink-concat] - id: set-nb-display-name + - id: strip-nb-whitespace - repo: https://github.com/kynan/nbstripout - rev: 0.8.1 + rev: 0.9.0 hooks: - id: nbstripout args: @@ -62,7 +58,7 @@ repos: metadata.vscode - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.14.0 + rev: v0.15.0 hooks: - id: ruff-check args: [--fix] @@ -99,7 +95,7 @@ repos: - id: trailing-whitespace - repo: https://github.com/ComPWA/prettier-pre-commit - rev: v3.4.2 + rev: v3.8.1 hooks: - id: prettier @@ -116,7 +112,7 @@ repos: - --in-place - repo: https://github.com/python-jsonschema/check-jsonschema - rev: 0.34.1 + rev: 0.36.1 hooks: - id: check-jsonschema name: Check CITATION.cff @@ -129,12 +125,12 @@ repos: pass_filenames: false - repo: https://github.com/streetsidesoftware/cspell-cli - rev: v9.2.0 + rev: v9.6.0 hooks: - id: cspell - repo: https://github.com/editorconfig-checker/editorconfig-checker.python - rev: 3.4.0 + rev: 3.6.0 hooks: - id: editorconfig-checker name: editorconfig @@ -146,20 +142,16 @@ repos: - repo: local hooks: - - id: mypy - name: mypy - entry: mypy - language: system + - id: ty + name: ty + entry: ty check + args: [--no-progress, --output-format=concise] + pass_filenames: false require_serial: true - types: - - python - - - repo: https://github.com/ComPWA/pyright-pre-commit - rev: v1.1.406 - hooks: - - id: pyright + language: system + types_or: [python, pyi, jupyter] - repo: https://github.com/astral-sh/uv-pre-commit - rev: 0.9.2 + rev: 0.10.0 hooks: - id: uv-lock diff --git a/.readthedocs.yml b/.readthedocs.yml index ebee9afb..cc704ce0 100644 --- a/.readthedocs.yml +++ b/.readthedocs.yml @@ -11,11 +11,7 @@ build: pixi global install graphviz uv - |- export UV_LINK_MODE=copy - uv run \ - --group doc \ - --no-dev \ - --with poethepoet \ - poe doc + uvx --from poethepoet poe doc mkdir -p $READTHEDOCS_OUTPUT mv docs/_build/html $READTHEDOCS_OUTPUT diff --git a/.vscode/extensions.json b/.vscode/extensions.json index 354e350e..feb6fed9 100644 --- a/.vscode/extensions.json +++ b/.vscode/extensions.json @@ -1,5 +1,6 @@ { "recommendations": [ + "astral-sh.ty", "charliermarsh.ruff", "christian-kohler.path-intellisense", "eamodio.gitlens", @@ -9,9 +10,7 @@ "github.vscode-github-actions", "github.vscode-pull-request-github", "mhutchie.git-graph", - "ms-python.mypy-type-checker", "ms-python.python", - "ms-python.vscode-pylance", "ms-toolsai.jupyter", "ms-toolsai.vscode-jupyter-cell-tags", "ms-vscode.live-server", @@ -30,7 +29,9 @@ "ms-python.black-formatter", "ms-python.flake8", "ms-python.isort", + "ms-python.mypy-type-checker", "ms-python.pylint", + "ms-python.vscode-pylance", "ms-toolsai.vscode-jupyter-slideshow", "ryanluker.vscode-coverage-gutters", "travisillig.vscode-json-stable-stringify", diff --git a/.vscode/settings.json b/.vscode/settings.json index 2df093e1..d8637092 100644 --- a/.vscode/settings.json +++ b/.vscode/settings.json @@ -32,6 +32,9 @@ "cSpell.enabled": true, "diffEditor.experimental.showMoves": true, "editor.formatOnSave": true, + "editor.unicodeHighlight.allowedCharacters": { + "–": true + }, "git.rebaseWhenSync": true, "github-actions.workflows.pinned.refresh.enabled": true, "github-actions.workflows.pinned.workflows": [".github/workflows/ci.yml"], @@ -44,14 +47,11 @@ ], "livePreview.defaultPreviewPath": "docs/_build/html", "multiDiffEditor.experimental.enabled": true, - "mypy-type-checker.args": ["--config-file=${workspaceFolder}/pyproject.toml"], "notebook.codeActionsOnSave": { "notebook.source.organizeImports": "explicit" }, "notebook.formatOnSave.enabled": true, "notebook.gotoSymbols.showAllSymbols": true, - "python.analysis.autoImportCompletions": false, - "python.analysis.inlayHints.pytestParameters": true, "python.defaultInterpreterPath": ".venv/bin/python", "python.terminal.activateEnvironment": false, "python.testing.pytestArgs": ["--numprocesses=auto"], @@ -62,16 +62,14 @@ "ruff.enable": true, "ruff.importStrategy": "fromEnvironment", "ruff.organizeImports": true, - "search.exclude": { - "**/.*cache": true, - "**/benchmarks/**/__init__.py": true, - "**/tests/**/__init__.py": true, - "**/uv.lock": true, - "typings/**": true - }, "telemetry.telemetryLevel": "off", "testing.coverageToolbarEnabled": true, "testing.showCoverageInExplorer": true, + "ty.completions.autoImport": false, + "ty.diagnosticMode": "workspace", + "ty.importStrategy": "fromEnvironment", + "ty.inlayHints.variableTypes": false, + "ty.showSyntaxErrors": false, "yaml.schemas": { "https://citation-file-format.github.io/1.2.0/schema.json": "CITATION.cff", "https://json.schemastore.org/github-workflow.json": "./.github/workflows/requirements.yml" diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index 528924b6..c5acd2fa 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -22,7 +22,7 @@ source .venv/bin/activate Formatting and linting checks are automatically performed when committing changes. This is done with [pre-commit](https://pre-commit.com). To install the hooks in your local repository, run install `pre-commit` with `uv`: ```shell -uv tool install pre-commit --with pre-commit-uv --force-reinstall +uv tool install pre-commit --with pre-commit-uv --force-reinstall --python=3.13 ``` and [`pre-commit install`](https://pre-commit.com/#3-install-the-git-hook-scripts) **once**: @@ -31,7 +31,13 @@ and [`pre-commit install`](https://pre-commit.com/#3-install-the-git-hook-script pre-commit install --install-hooks ``` -[Poe the Poet](https://poethepoet.natn.io) is used as a task runner. You can see which local CI checks it defines by running +[Poe the Poet](https://poethepoet.natn.io) is used as a task runner. Install it globally (within your home folder) with `uv`: + +```shell +uv tool install poethepoet --force-reinstall --python=3.13 +``` + +You can see which local CI checks it defines by running ```shell poe diff --git a/README.md b/README.md index 77625e11..aafac29a 100644 --- a/README.md +++ b/README.md @@ -14,12 +14,12 @@ [![Documentation build status](https://readthedocs.org/projects/ampform/badge/?version=latest)](https://ampform.readthedocs.io) [![pre-commit.ci status](https://results.pre-commit.ci/badge/github/ComPWA/ampform/main.svg)](https://results.pre-commit.ci/latest/github/ComPWA/ampform/main) [![CI status](https://github.com/ComPWA/ampform/workflows/CI/badge.svg)](https://github.com/ComPWA/ampform/actions/workflows/ci.yml?query=branch%3Amain+workflow%3Aci) -[![Checked with mypy](http://www.mypy-lang.org/static/mypy_badge.svg)](https://mypy.readthedocs.io) [![Test coverage](https://codecov.io/gh/ComPWA/ampform/branch/main/graph/badge.svg)](https://codecov.io/gh/ComPWA/ampform) -[![Spelling checked](https://img.shields.io/badge/cspell-checked-brightgreen.svg)](https://github.com/streetsidesoftware/cspell/tree/master/packages/cspell) +[![Spelling checked](https://img.shields.io/badge/cspell-checked-brightgreen.svg)](https://github.com/streetsidesoftware/cspell/tree/main/packages/cspell) [![code style: prettier](https://img.shields.io/badge/code_style-prettier-ff69b4.svg?style=flat-square)](https://github.com/prettier/prettier) [![Ruff](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/charliermarsh/ruff/main/assets/badge/v2.json)](https://github.com/astral-sh/ruff) [![uv](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/uv/main/assets/badge/v0.json)](https://github.com/astral-sh/uv) +[![ty](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/ty/main/assets/badge/v0.json)](https://github.com/astral-sh/ty) AmpForm is a Python library of spin formalisms and dynamics with which you can automatically formulate symbolic amplitude models for Partial Wave Analysis. The diff --git a/docs/_extend_docstrings.py b/docs/_extend_docstrings.py index 38ef3ce3..08b28bb6 100644 --- a/docs/_extend_docstrings.py +++ b/docs/_extend_docstrings.py @@ -3,7 +3,6 @@ This small script is used by ``conf.py`` to dynamically modify docstrings. """ -# pyright: reportMissingImports=false from __future__ import annotations import inspect @@ -84,15 +83,15 @@ def extend_docstrings() -> None: definition() -extend_BreakupMomentum = append_phsp_doit(BreakupMomentum) # type:ignore[arg-type] -extend_BreakupMomentumComplex = append_phsp_doit(BreakupMomentumComplex) # type:ignore[arg-type] -extend_BreakupMomentumKallen = append_phsp_doit(BreakupMomentumKallen) # type:ignore[arg-type] -extend_BreakupMomentumSplitSqrt = append_phsp_doit(BreakupMomentumSplitSqrt) # type:ignore[arg-type] -extend_BreakupMomentumSquared = append_phsp_doit(BreakupMomentumSquared) # type:ignore[arg-type] -extend_PhaseSpaceFactor = append_phsp_doit(PhaseSpaceFactor) # type:ignore[arg-type] -extend_PhaseSpaceFactorKallen = append_phsp_doit(PhaseSpaceFactorKallen) # type:ignore[arg-type] -extend_PhaseSpaceFactorSplitSqrt = append_phsp_doit(PhaseSpaceFactorSplitSqrt) # type:ignore[arg-type] -extend_PhaseSpaceFactorSWave = append_phsp_doit(PhaseSpaceFactorSWave, wide=True) # type:ignore[arg-type] +extend_BreakupMomentum = append_phsp_doit(BreakupMomentum) +extend_BreakupMomentumComplex = append_phsp_doit(BreakupMomentumComplex) +extend_BreakupMomentumKallen = append_phsp_doit(BreakupMomentumKallen) +extend_BreakupMomentumSplitSqrt = append_phsp_doit(BreakupMomentumSplitSqrt) +extend_BreakupMomentumSquared = append_phsp_doit(BreakupMomentumSquared) +extend_PhaseSpaceFactor = append_phsp_doit(PhaseSpaceFactor) +extend_PhaseSpaceFactorKallen = append_phsp_doit(PhaseSpaceFactorKallen) +extend_PhaseSpaceFactorSplitSqrt = append_phsp_doit(PhaseSpaceFactorSplitSqrt) +extend_PhaseSpaceFactorSWave = append_phsp_doit(PhaseSpaceFactorSWave, wide=True) def extend_BlattWeisskopfSquared() -> None: @@ -786,7 +785,7 @@ def _graphviz_to_image( options = {} global _GRAPHVIZ_COUNTER # noqa: PLW0603 output_file = f"graphviz_{_GRAPHVIZ_COUNTER}" - _GRAPHVIZ_COUNTER += 1 # pyright: ignore[reportConstantRedefinition] + _GRAPHVIZ_COUNTER += 1 graphviz.Source(dot).render(f"{_IMAGE_DIR}/{output_file}", format=format) restructuredtext = "\n" if label: diff --git a/docs/bibliography.bib b/docs/bibliography.bib index b2de9a22..1fd8bf65 100755 --- a/docs/bibliography.bib +++ b/docs/bibliography.bib @@ -1,9 +1,9 @@ @article{Aitchison:1972ay, - title = {The 𝐾-Matrix Formalism for Overlapping Resonances}, + title = {The $K$-matrix formalism for overlapping resonances}, author = {Aitchison, I.J.R.}, - year = {1972}, + year = 1972, month = jul, - journal = {Nuclear Physics A}, + journal = {Nucl. Phys. A}, volume = {189}, number = {2}, pages = {417--423}, @@ -15,17 +15,16 @@ @article{Aitchison:1972ay @book{Byckling:1971vca, title = {Particle {{Kinematics}}}, author = {Byckling, Eero and Kajantie, Keijo}, - year = {1973}, + year = 1973, publisher = {Wiley}, - address = {London, New York}, - isbn = {978-0-471-12885-4}, - lccn = {QC794.6.K5 B95} + address = {London ; New York}, + isbn = {978-0-471-12885-4} } @article{Cahn:1985wu, - title = {Mystery of the δ(980)}, + title = {Mystery of the $\delta(980)$}, author = {Cahn, R.N. and Landshoff, P.V.}, - year = {1986}, + year = 1986, month = mar, journal = {Nuclear Physics B}, volume = {266}, @@ -36,12 +35,20 @@ @article{Cahn:1985wu url = {https://linkinghub.elsevier.com/retrieve/pii/0550321386901008} } +@misc{Chung:1995-PrimerKmatrixFormalism, + title = {A {Primer} on {$K$-matrix} {Formalism} — {Version VII}}, + author = {Chung, Suh-Urk and Klempt, Eberhard}, + year = 1995, + month = mar, + url = {https://citeseerx.ist.psu.edu/document?repid=rep1&type=pdf&doi=88b101a5300736f78293cf10116c32e5d25e3c91} +} + @article{Chung:1995dx, - title = {{Partial wave analysis in 𝐾-matrix formalism}}, + title = {Partial wave analysis in {$K$-matrix} formalism}, author = {Chung, Suh-Urk and Brose, J. and Hackmann, R. and Klempt, E. and Spanier, S. and Strassburger, C.}, - year = {1995}, + year = 1995, month = may, - journal = {Annalen der Physik}, + journal = {Ann. Phys.}, volume = {507}, number = {5}, pages = {404--430}, @@ -50,37 +57,29 @@ @article{Chung:1995dx url = {http://doi.wiley.com/10.1002/andp.19955070504} } -@techreport{chungFormulasAngularMomentumBarrier2015, - title = {Formulas for {{Angular-Momentum Barrier Factors}} ({{Version II}})}, +@techreport{Chung:2014-SpinFormalismsUpdated, + title = {Spin {{Formalisms}} ({{Updated Version}})}, author = {Chung, Suh-Urk}, - year = {2015}, - month = mar, + year = 2014, + month = jul, + number = {BNL--76975-2006-IR, 890945}, institution = {Brookhaven National Laboratory}, - url = {https://physique.cuso.ch/fileadmin/physique/document/2015_chung_brfactor1.pdf} + url = {https://cds.cern.ch/record/186421/files/BNL-76975-2006-IR.pdf} } -@misc{chungPrimerKmatrixFormalism1995, - title = {A {{Primer}} on {{K-matrix Formalism}} — {{Version VII}}}, +@techreport{chungFormulasAngularMomentumBarrier2015, + title = {Formulas for {{Angular-Momentum Barrier Factors}} ({{Version II}})}, author = {Chung, Suh-Urk}, - year = {1995}, + year = 2015, month = mar, - url = {https://citeseerx.ist.psu.edu/document?repid=rep1&type=pdf&doi=88b101a5300736f78293cf10116c32e5d25e3c91} -} - -@techreport{chungSpinFormalismsUpdated2014, - title = {Spin {{Formalisms}} ({{Updated Version}})}, - author = {Chung, Suh-Urk}, - year = {2014}, - month = jul, - pages = {BNL--76975-2006-IR, 890945}, institution = {Brookhaven National Laboratory}, - url = {https://suchung.web.cern.ch/spinfm1.pdf} + url = {https://physique.cuso.ch/fileadmin/physique/document/2015_chung_brfactor1.pdf} } @article{Flatte:1976xu, - title = {Coupled-Channel Analysis of the Πη and {{KK̄}} Systems near {{KK̄}} Threshold}, + title = {Coupled-channel analysis of the $\pi\eta$ and {$K\bar{K}$} systems near {$K\bar{K}$} threshold}, author = {Flatté, S.M.}, - year = {1976}, + year = 1976, month = jul, journal = {Physics Letters B}, volume = {63}, @@ -94,9 +93,9 @@ @article{Flatte:1976xu @article{Jacob:1959at, title = {On the General Theory of Collisions for Particles with Spin}, author = {Jacob, M. and Wick, G.C.}, - year = {1959}, + year = 1959, month = aug, - journal = {Annals of Physics}, + journal = {Ann. Phys.}, volume = {7}, number = {4}, pages = {404--428}, @@ -108,85 +107,100 @@ @article{Jacob:1959at @article{JPAC:2019ufm, title = {Dalitz-Plot Decomposition for Three-Body Decays}, author = {Mikhasenko, M. and Albaladejo, M. and Bibrzycki, Ł. and {Fernandez-Ramirez}, C. and Mathieu, V. and Mitchell, S. and Pappagallo, M. and Pilloni, A. and Winney, D. and Skwarnicki, T. and Szczepaniak, A. P.}, - year = {2020}, + year = 2020, month = feb, - journal = {Physical Review D: Particles and Fields}, + journal = {Phys. Rev. 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High Energy Phys.}, volume = {2020}, + eprint = {1911.10025}, pages = {1--15}, issn = {1687-7365, 1687-7357}, doi = {10.1155/2020/6674595}, - url = {https://www.hindawi.com/journals/ahep/2020/6674595/}, - archiveprefix = {arxiv} + url = {https://www.hindawi.com/journals/ahep/2020/6674595/} } @book{Martin:1970hmp, title = {Elementary {{Particle Theory}}}, author = {Martin, Alan D. and Spearman, T. D.}, - year = {1970}, - publisher = {North-Holland Pub. 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A. and Anderson, J. and Kramer, M. and Schaffner, P. and Zheng, W.}, + year = 2024, + month = aug, + journal = {Phys. Rev. D}, + volume = {110}, + number = {3}, + pages = {030001}, + issn = {2470-0010, 2470-0029}, + doi = {10.1103/PhysRevD.110.030001}, + url = {https://link.aps.org/doi/10.1103/PhysRevD.110.030001}, + collaboration = {Particle Data Group} } @misc{Richman:1984gh, title = {An {{Experimenter}}'s {{Guide}} to the {{Helicity Formalism}}}, author = {Richman, Jeffrey D.}, - year = {1984}, + year = 1984, month = jun, - url = {https://inspirehep.net/literature/202987} + url = {https://cds.cern.ch/record/153636} } @article{VonHippel:1972fg, title = {Centrifugal-{{Barrier Effects}} in {{Resonance Partial Decay Widths}}, {{Shapes}}, and {{Production Amplitudes}}}, author = {{von Hippel}, Frank and Quigg, C.}, - year = {1972}, + year = 1972, month = feb, - journal = {Physical Review D}, + journal = {Phys. Rev. D}, volume = {5}, number = {3}, pages = {624--638}, diff --git a/docs/conf.py b/docs/conf.py index 6c2c9cf8..06475381 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -72,12 +72,11 @@ def _get_dataclasses(module): "8.0.4": "8.0.5", "8.0.6": "8.0.5", "8.1.1": "8.1.2", + "8.1.6": "8.1.5", "8.1.7": "8.1.5", + "8.1.8": "8.1.5", }, - "mpl-interactions": { - "0.24.1": "0.24.0", - "0.24.2": "0.24.0", - }, + "qrules": {"0.10.7.dev.*": "0.10.6"}, }) BRANCH = get_branch_name() @@ -95,6 +94,8 @@ def _get_dataclasses(module): add_module_names = False api_github_repo = f"{ORGANIZATION}/{REPO_NAME}" api_target_substitutions: dict[str, str | tuple[str, str]] = { + "ampform.helicity._T": "typing.TypeVar", + "ampform.sympy._decorator.ExprClass": ("obj", "ampform.sympy.ExprClass"), "BuilderReturnType": ("obj", "ampform.dynamics.builder.BuilderReturnType"), "DecoratedClass": ("obj", "ampform.sympy.deprecated.DecoratedClass"), "DecoratedExpr": ("obj", "ampform.sympy.deprecated.DecoratedExpr"), @@ -102,23 +103,16 @@ def _get_dataclasses(module): "FourMomentumSymbol": ("obj", "ampform.kinematics.lorentz.FourMomentumSymbol"), "InteractionProperties": "qrules.quantum_numbers.InteractionProperties", "LatexPrinter": "sympy.printing.printer.Printer", - "Literal[(-1, 1)]": "typing.Literal", "Literal[-1, 1]": "typing.Literal", + "Literal[(-1, 1)]": "typing.Literal", "NumPyPrintable": ("class", "ampform.sympy.NumPyPrintable"), "NumPyPrinter": "sympy.printing.printer.Printer", "P": "typing.ParamSpec", "ParameterValue": ("obj", "ampform.helicity.ParameterValue"), "Particle": "qrules.particle.Particle", - "SympyObject": "typing.TypeVar", "ReactionInfo": "qrules.transition.ReactionInfo", - "Slider": ("obj", "symplot.Slider"), - "State": "qrules.transition.State", - "StateTransition": "qrules.topology.Transition", - "T": "typing.TypeVar", - "Topology": "qrules.topology.Topology", - "WignerD": "sympy.physics.quantum.spin.WignerD", - "ampform.helicity._T": "typing.TypeVar", - "ampform.sympy._decorator.ExprClass": ("obj", "ampform.sympy.ExprClass"), + "Slider": "ipywidgets.widgets.valuewidget.ValueWidget", + "sp.acos": "sympy.functions.elementary.trigonometric.acos", "sp.Basic": "sympy.core.basic.Basic", "sp.Expr": "sympy.core.expr.Expr", "sp.Float": "sympy.core.numbers.Float", @@ -126,15 +120,19 @@ def _get_dataclasses(module): "sp.IndexedBase": "sympy.tensor.indexed.IndexedBase", "sp.Rational": "sympy.core.numbers.Rational", "sp.Symbol": "sympy.core.symbol.Symbol", - "sp.acos": "sympy.functions.elementary.trigonometric.acos", + "State": "qrules.transition.State", + "StateTransition": "qrules.topology.Transition", "sympy.printing.numpy.NumPyPrinter": "sympy.printing.printer.Printer", + "SympyObject": "typing.TypeVar", + "T": "typing.TypeVar", + "Topology": "qrules.topology.Topology", + "WignerD": "sympy.physics.quantum.spin.WignerD", "sympy.tensor.array.expressions.array_expressions.ArraySymbol": ( "mod", "sympy.tensor.array.expressions", ), } api_target_types: dict[str, str] = { - "RangeDefinition": "obj", "ampform.helicity.align.dpd.T": "obj", } author = "Common Partial Wave Analysis" @@ -152,6 +150,7 @@ def _get_dataclasses(module): autosectionlabel_prefix_document = True bibtex_bibfiles = ["bibliography.bib"] bibtex_default_style = "unsrt_et_al" +bibtex_use_mathjax = True bibtex_reference_style = "author_year" codeautolink_concat_default = True codeautolink_global_preface = """ @@ -276,13 +275,13 @@ def _get_dataclasses(module): "graphviz": ("https://graphviz.readthedocs.io/en/stable", None), "ipywidgets": (f"https://ipywidgets.readthedocs.io/en/{pin('ipywidgets')}", None), "matplotlib": (f"https://matplotlib.org/{pin('matplotlib')}", None), - "mpl_interactions": ( - f"https://mpl-interactions.readthedocs.io/en/{pin('mpl-interactions')}", - None, - ), "numpy": (f"https://numpy.org/doc/{pin_minor('numpy')}", None), "python": ("https://docs.python.org/3", None), "qrules": (f"https://qrules.readthedocs.io/{pin('qrules')}", None), + "spb": ( + f"https://sympy-plot-backends.readthedocs.io/en/v{pin('sympy-plot-backends')}", + None, + ), "sympy": ("https://docs.sympy.org/latest", None), } linkcheck_anchors = False diff --git a/docs/usage.ipynb b/docs/usage.ipynb index 7f0e6387..95e745db 100644 --- a/docs/usage.ipynb +++ b/docs/usage.ipynb @@ -1,62 +1,15 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Usage\n", + "\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Usage" - ] - }, { "cell_type": "markdown", "metadata": {}, @@ -342,7 +295,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.11.8" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/amplitude.ipynb b/docs/usage/amplitude.ipynb index 5ec24cdc..d650795d 100644 --- a/docs/usage/amplitude.ipynb +++ b/docs/usage/amplitude.ipynb @@ -1,62 +1,15 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Formulate amplitude model\n", + "\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Formulate amplitude model" - ] - }, { "cell_type": "code", "execution_count": null, @@ -73,14 +26,14 @@ }, "outputs": [], "source": [ - "%config InlineBackend.figure_formats = ['svg']\n", - "\n", "import sympy as sp\n", "from IPython.display import Math\n", + "from matplotlib_inline.backend_inline import set_matplotlib_formats\n", "\n", "from ampform.io import aslatex, improve_latex_rendering\n", "\n", - "improve_latex_rendering()" + "improve_latex_rendering()\n", + "set_matplotlib_formats(\"svg\")" ] }, { @@ -385,7 +338,7 @@ "metadata": {}, "outputs": [], "source": [ - "model_builder.config.stable_final_state_ids = [0, 1, 2]\n", + "model_builder.config.stable_final_state_ids = {0, 1, 2}\n", "model_stable_masses = model_builder.formulate()\n", "Math(aslatex(model_stable_masses.parameter_defaults))" ] @@ -1096,7 +1049,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.12.8" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/dynamics.ipynb b/docs/usage/dynamics.ipynb index ef38d2ea..abbfa0ba 100644 --- a/docs/usage/dynamics.ipynb +++ b/docs/usage/dynamics.ipynb @@ -1,62 +1,14 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Dynamics\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Dynamics" - ] - }, { "cell_type": "markdown", "metadata": {}, @@ -101,19 +53,19 @@ "outputs": [], "source": [ "import logging\n", + "import os\n", "import warnings\n", "\n", "import matplotlib.pyplot as plt\n", - "import mpl_interactions.ipyplot as iplt\n", "import numpy as np\n", "import sympy as sp\n", "from IPython.display import Math, display\n", + "from matplotlib_inline.backend_inline import set_matplotlib_formats\n", "\n", - "import symplot\n", - "\n", + "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)\n", "logging.basicConfig()\n", "logging.getLogger().setLevel(logging.ERROR)\n", - "\n", + "set_matplotlib_formats(\"svg\")\n", "warnings.filterwarnings(\"ignore\")" ] }, @@ -178,7 +130,6 @@ }, "outputs": [], "source": [ - "%config InlineBackend.figure_formats = ['svg']\n", "%matplotlib inline\n", "\n", "bl2_func = sp.lambdify((z, L), bl2.doit())\n", @@ -303,7 +254,7 @@ " ax.plot(x[right], y_q2[right], c=\"C1\", label=f\"${sp.latex(q2)}$\")[0],\n", " )\n", " else:\n", - " LINES[0].set_xdata(m_thr)\n", + " LINES[0].set_xdata([m_thr])\n", " LINES[1].set_data(x[left], y_ff2[left])\n", " LINES[2].set_data(x[left], y_q2[left])\n", " LINES[3].set_data(x[right], y_ff2[right])\n", @@ -311,7 +262,6 @@ " y_min = np.nanmin(y_q2)\n", " y_max = np.nanmax(y_q2[right])\n", " ax.set_ylim(y_min, y_max)\n", - " fig.canvas.draw()\n", "\n", "\n", "UI = w.VBox(list(sliders.values()))\n", @@ -486,7 +436,9 @@ "outputs": [], "source": [ "from ampform.dynamics import PhaseSpaceFactorComplex\n", + "from ampform.sympy.slider import create_slider\n", "\n", + "np.seterr(divide=\"ignore\")\n", "# Two types of relativistic Breit-Wigners\n", "rel_bw_with_ff = relativistic_breit_wigner_with_ff(\n", " s=m**2,\n", @@ -510,127 +462,85 @@ ")\n", "\n", "# Lambdify\n", - "np_rel_bw_with_ff, sliders = symplot.prepare_sliders(\n", - " plot_symbol=m,\n", - " expression=rel_bw_with_ff.doit(),\n", - ")\n", - "np_rel_bw_with_ff_ac = sp.lambdify(\n", - " args=(m, w0, L, d, m0, m1, m2),\n", - " expr=rel_bw_with_ff_ac.doit(),\n", - ")\n", - "np_rel_bw = sp.lambdify(\n", - " args=(m, w0, L, d, m0, m1, m2),\n", - " expr=rel_bw.doit(),\n", - ")\n", - "\n", - "# Set sliders\n", - "plot_domain = np.linspace(0, 4, num=500)\n", - "sliders.set_ranges(\n", - " m0=(0, 4, 200),\n", - " Gamma0=(0, 1, 100),\n", - " L=(0, 10),\n", - " m1=(0, 2, 200),\n", - " m2=(0, 2, 200),\n", - " d=(0, 5),\n", - ")\n", - "sliders.set_values(\n", - " m0=1.5,\n", - " Gamma0=0.6,\n", - " L=0,\n", - " m1=0.6,\n", - " m2=0.6,\n", - " d=1,\n", - ")\n", + "args = (m, w0, m0, m1, m2, L, d)\n", + "np_rel_bw_with_ff = sp.lambdify(args, rel_bw_with_ff.doit())\n", + "np_rel_bw_with_ff_ac = sp.lambdify(args, expr=rel_bw_with_ff_ac.doit())\n", + "np_rel_bw = sp.lambdify(args, expr=rel_bw.doit())\n", + "\n", + "# Create UI\n", + "x = np.linspace(0, 4, num=500)\n", + "sliders = {str(s): create_slider(s, max=1, step=0.01, value=0.6) for s in args[1:]}\n", + "sliders[\"m0\"].max = 4\n", + "sliders[\"m1\"].max = 2\n", + "sliders[\"m2\"].max = 2\n", + "sliders[\"L\"].max = 10\n", + "sliders[\"d\"].max = 5\n", + "sliders[\"m0\"].value = 1.5\n", + "sliders[\"L\"].value = 1\n", + "sliders[\"d\"].value = 1\n", + "UI = w.VBox(list(sliders.values()))\n", "\n", "fig, axes = plt.subplots(\n", " nrows=2,\n", " figsize=(8, 6),\n", " sharex=True,\n", ")\n", - "ax_ff, ax_ac = axes\n", - "ax_ac.set_xlabel(\"$m$\")\n", - "for ax in axes:\n", + "fig.canvas.footer_visible = False\n", + "fig.canvas.header_visible = False\n", + "fig.canvas.toolbar_visible = False\n", + "ax1, ax2 = axes.ravel()\n", + "ax2.set_xlabel(\"$m$\")\n", + "for ax in axes.ravel():\n", " ax.axhline(0, c=\"gray\", linewidth=0.5)\n", "\n", "rho_c = PhaseSpaceFactorComplex(m**2, m1, m2)\n", - "ax_ff.set_title(f\"'Complex' phase space factor: ${sp.latex(rho_c.evaluate())}$\")\n", - "ax_ac.set_title(\"$S$-wave Chew-Mandelstam as phase space factor\")\n", + "ax1.set_title(f\"'Complex' phase space factor: ${sp.latex(rho_c.evaluate())}$\")\n", + "ax2.set_title(\"$S$-wave Chew-Mandelstam as phase space factor\")\n", "\n", "ylim = \"auto\" # (-0.6, 1.2)\n", - "controls = iplt.plot(\n", - " plot_domain,\n", - " lambda *args, **kwargs: np_rel_bw_with_ff(*args, **kwargs).real,\n", - " label=\"real\",\n", - " **sliders,\n", - " ylim=ylim,\n", - " ax=ax_ff,\n", - ")\n", - "iplt.plot(\n", - " plot_domain,\n", - " lambda *args, **kwargs: np_rel_bw_with_ff(*args, **kwargs).imag,\n", - " label=\"imaginary\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_ff,\n", - ")\n", - "iplt.plot(\n", - " plot_domain,\n", - " lambda *args, **kwargs: np.abs(np_rel_bw_with_ff(*args, **kwargs)) ** 2,\n", - " label=\"absolute\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_ff,\n", - " c=\"black\",\n", - " linestyle=\"dotted\",\n", - ")\n", + "LINES = None\n", "\n", "\n", - "iplt.plot(\n", - " plot_domain,\n", - " lambda *args, **kwargs: np_rel_bw_with_ff_ac(*args, **kwargs).real,\n", - " label=\"real\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_ac,\n", - ")\n", - "iplt.plot(\n", - " plot_domain,\n", - " lambda *args, **kwargs: np_rel_bw_with_ff_ac(*args, **kwargs).imag,\n", - " label=\"imaginary\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_ac,\n", - ")\n", - "iplt.plot(\n", - " plot_domain,\n", - " lambda *args, **kwargs: np.abs(np_rel_bw_with_ff_ac(*args, **kwargs)) ** 2,\n", - " label=\"absolute\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_ac,\n", - " c=\"black\",\n", - " linestyle=\"dotted\",\n", - ")\n", + "def plot(**kwargs: float) -> None:\n", + " global LINES\n", + " z = np_rel_bw_with_ff(x, **kwargs)\n", + " z_ac = np_rel_bw_with_ff_ac(x, **kwargs)\n", + " style = dict(alpha=0.3)\n", + " m0_val = kwargs[\"m0\"]\n", + " thr = kwargs[\"m1\"] + kwargs[\"m2\"]\n", + " if LINES is None:\n", + " LINES = [\n", + " ax1.plot(x, z.real, label=\"real\")[0],\n", + " ax1.plot(x, z.imag, label=\"imag\")[0],\n", + " ax1.plot(x, np.abs(z) ** 2, label=\"absolute\", c=\"black\", ls=\"dotted\")[0],\n", + " ax2.plot(x, z_ac.real, label=\"real\")[0],\n", + " ax2.plot(x, z_ac.imag, label=\"imaginary\")[0],\n", + " ax2.plot(x, np.abs(z_ac) ** 2, label=\"absolute\", c=\"black\", ls=\"dotted\")[0],\n", + " ax1.axvline(m0_val, c=\"red\", label=f\"${sp.latex(m0)}$\", **style),\n", + " ax2.axvline(m0_val, c=\"red\", label=f\"${sp.latex(m0)}$\", **style),\n", + " ax1.axvline(thr, c=\"black\", label=f\"${sp.latex(m1 + m2)}$\", **style),\n", + " ax2.axvline(thr, c=\"black\", label=f\"${sp.latex(m1 + m2)}$\", **style),\n", + " ]\n", + " else:\n", + " LINES[0].set_ydata(z.real)\n", + " LINES[1].set_ydata(z.imag)\n", + " LINES[2].set_ydata(np.abs(z) ** 2)\n", + " LINES[3].set_ydata(z_ac.real)\n", + " LINES[4].set_ydata(z_ac.imag)\n", + " LINES[5].set_ydata(np.abs(z_ac) ** 2)\n", + " LINES[6].set_xdata([m0_val])\n", + " LINES[7].set_xdata([m0_val])\n", + " LINES[8].set_xdata([thr])\n", + " LINES[9].set_xdata([thr])\n", + " for ax in axes.ravel():\n", + " ax.relim()\n", + " ax.autoscale_view()\n", + "\n", "\n", - "for ax in axes:\n", - " iplt.axvline(\n", - " controls[\"m0\"],\n", - " ax=ax,\n", - " c=\"red\",\n", - " label=f\"${sp.latex(m0)}$\",\n", - " alpha=0.3,\n", - " )\n", - " iplt.axvline(\n", - " lambda m1, m2, **kwargs: m1 + m2,\n", - " controls=controls,\n", - " ax=ax,\n", - " c=\"black\",\n", - " alpha=0.3,\n", - " label=f\"${sp.latex(m1)} + {sp.latex(m2)}$\",\n", - " )\n", - "ax_ac.legend(loc=\"upper right\")\n", - "fig.tight_layout()\n", - "plt.show()" + "output = w.interactive_output(plot, controls=sliders)\n", + "ax2.legend(loc=\"upper right\")\n", + "plt.show()\n", + "display(UI, output)" ] }, { @@ -675,7 +585,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.13.11" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/dynamics/analytic-continuation.ipynb b/docs/usage/dynamics/analytic-continuation.ipynb index 6a88af3e..d69b3c50 100644 --- a/docs/usage/dynamics/analytic-continuation.ipynb +++ b/docs/usage/dynamics/analytic-continuation.ipynb @@ -1,62 +1,14 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Analytic continuation\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Analytic continuation" - ] - }, { "cell_type": "markdown", "metadata": {}, @@ -89,6 +41,7 @@ }, "outputs": [], "source": [ + "import os\n", "import timeit\n", "import warnings\n", "from textwrap import dedent\n", @@ -108,6 +61,7 @@ " return Math(aslatex({x: x.doit(deep=deep) for x in exprs}))\n", "\n", "\n", + "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)\n", "set_matplotlib_formats(\"svg\")\n", "warnings.filterwarnings(\"ignore\")" ] @@ -398,7 +352,7 @@ " ax.set_yticks([0])\n", "\n", "style = dict(\n", - " cmap=\"coolwarm\",\n", + " cmap=\"RdBu\",\n", " rasterized=True,\n", " vmin=-z_max,\n", " vmax=+z_max,\n", @@ -689,7 +643,7 @@ "source_hidden": true }, "mystnb": { - "code_prompt_show": "Lambdify to numerical functions" + "code_prompt_show": "Import Python libraries" }, "tags": [ "hide-input" @@ -697,18 +651,35 @@ }, "outputs": [], "source": [ - "import symplot\n", - "from ampform.sympy.math import ComplexSqrt\n", + "import ipywidgets as w\n", + "from IPython.display import display\n", "\n", + "from ampform.sympy.math import ComplexSqrt\n", + "from ampform.sympy.slider import create_slider" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "mystnb": { + "code_prompt_show": "Lambdify to numerical functions" + }, + "tags": [ + "hide-input" + ] + }, + "outputs": [], + "source": [ "m = sp.Symbol(\"m\", nonnegative=True)\n", "rho_c = PhaseSpaceFactorComplex(m**2, m1, m2)\n", "rho_cm = PhaseSpaceFactorSWave(m**2, m1, m2)\n", "rho_ac = EqualMassPhaseSpaceFactor(m**2, m1, m2)\n", - "np_rho_c, sliders = symplot.prepare_sliders(plot_symbol=m, expression=rho_c.doit())\n", - "np_rho_ac = sp.lambdify((m, m1, m2), rho_ac.doit())\n", - "np_rho_cm = sp.lambdify((m, m1, m2), rho_cm.doit())\n", "q = BreakupMomentumComplex(m**2, m1, m2)\n", - "np_breakup_momentum = sp.lambdify((m, m1, m2), 2 * q.doit())" + "rho_c_func = sp.lambdify((m, m1, m2), rho_c.doit())\n", + "rho_ac_func = sp.lambdify((m, m1, m2), rho_ac.doit())\n", + "rho_cm_func = sp.lambdify((m, m1, m2), rho_cm.doit())\n", + "q_func = sp.lambdify((m, m1, m2), 2 * q.doit())" ] }, { @@ -721,25 +692,13 @@ { "cell_type": "code", "execution_count": null, - "metadata": { - "mystnb": { - "code_prompt_show": "Define sliders and plot range" - }, - "tags": [ - "hide-input" - ] - }, + "metadata": {}, "outputs": [], "source": [ - "plot_domain = np.linspace(0, 3, num=500)\n", - "sliders.set_ranges(\n", - " m1=(0, 2, 200),\n", - " m2=(0, 2, 200),\n", - ")\n", - "sliders.set_values(\n", - " m1=0.3,\n", - " m2=0.75,\n", - ")" + "sliders = {str(s): create_slider(s, min=0, max=2, step=0.01) for s in [m1, m2]}\n", + "sliders[\"m1\"].value = 0.3\n", + "sliders[\"m2\"].value = 0.75\n", + "UI = w.VBox(list(sliders.values()))" ] }, { @@ -757,14 +716,11 @@ }, "outputs": [], "source": [ - "import mpl_interactions.ipyplot as iplt\n", - "\n", - "import symplot\n", - "\n", + "x = np.linspace(0, 3, num=500)\n", "fig, axes = plt.subplots(\n", + " figsize=(8, 5),\n", " ncols=2,\n", " nrows=2,\n", - " figsize=[8, 5],\n", " sharex=True,\n", " sharey=True,\n", ")\n", @@ -780,128 +736,53 @@ " ax.spines[\"right\"].set_visible(False)\n", " ax.spines[\"top\"].set_visible(False)\n", "\n", - "(ax_q, ax_rho), (ax_rho_ac, ax_rho_cm) = axes\n", + "ax1, ax2, ax3, ax4 = axes.ravel()\n", "for ax in axes[-1]:\n", " ax.set_xlabel(\"$m$\")\n", "for ax in axes.flatten():\n", + " ax.set_ylim(-0.1, 1.4)\n", " ax.set_yticks([])\n", " ax.set_yticks([])\n", "\n", - "\n", - "def func_imag(func, *args, **kwargs):\n", - " return lambda *args, **kwargs: func(*args, **kwargs).imag\n", - "\n", - "\n", - "def func_real(func, *args, **kwargs):\n", - " return lambda *args, **kwargs: func(*args, **kwargs).real\n", - "\n", - "\n", "ylim = (-0.1, 1.4)\n", "q_math = ComplexSqrt(sp.Symbol(\"q^2\")) / (8 * sp.pi)\n", - "ax_q.set_title(f\"${sp.latex(q_math)}$\", y=0.85)\n", - "controls = iplt.plot(\n", - " plot_domain,\n", - " func_real(np_breakup_momentum),\n", - " label=\"real\",\n", - " **sliders,\n", - " ylim=ylim,\n", - " ax=ax_q,\n", - " alpha=0.7,\n", - ")\n", - "iplt.plot(\n", - " plot_domain,\n", - " func_imag(np_breakup_momentum),\n", - " label=\"imaginary\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_q,\n", - " alpha=0.7,\n", - ")\n", - "\n", - "ax_rho.set_title(f\"${sp.latex(rho_c)}$\", y=0.85)\n", - "iplt.plot(\n", - " plot_domain,\n", - " func_real(np_rho_c),\n", - " label=\"real\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_rho,\n", - " alpha=0.7,\n", - ")\n", - "iplt.plot(\n", - " plot_domain,\n", - " func_imag(np_rho_c),\n", - " label=\"imaginary\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_rho,\n", - " alpha=0.7,\n", - ")\n", - "\n", - "ax_rho_ac.set_title(R\"equal mass $\\rho^\\mathrm{eq}(m^2)$\", y=0.85)\n", - "iplt.plot(\n", - " plot_domain,\n", - " func_real(np_rho_ac),\n", - " label=\"real\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_rho_ac,\n", - " alpha=0.7,\n", - ")\n", - "iplt.plot(\n", - " plot_domain,\n", - " func_imag(np_rho_ac),\n", - " label=\"imaginary\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_rho_ac,\n", - " alpha=0.7,\n", - ")\n", - "\n", - "ax_rho_cm.set_title(R\"Chew-Mandelstam $\\rho^\\mathrm{CM}(m^2)$\", y=0.85)\n", - "iplt.plot(\n", - " plot_domain,\n", - " func_real(np_rho_cm),\n", - " label=\"real\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_rho_cm,\n", - " alpha=0.7,\n", - ")\n", - "iplt.plot(\n", - " plot_domain,\n", - " func_imag(np_rho_cm),\n", - " label=\"imaginary\",\n", - " controls=controls,\n", - " ylim=ylim,\n", - " ax=ax_rho_cm,\n", - " alpha=0.7,\n", - ")\n", - "\n", - "ax_rho.legend(loc=\"upper right\")\n", - "plt.show()" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-input", - "full-width" - ] - }, - "outputs": [], - "source": [ - "if STATIC_WEB_PAGE:\n", - " from IPython.display import SVG, display\n", - "\n", - " output_file = \"analytic-continuation.svg\"\n", - " plt.savefig(output_file)\n", - " display(SVG(output_file))" + "ax1.set_title(f\"${sp.latex(q_math)}$\", y=0.85)\n", + "ax2.set_title(f\"${sp.latex(rho_c)}$\", y=0.85)\n", + "ax3.set_title(R\"equal mass $\\rho^\\mathrm{eq}(m^2)$\", y=0.85)\n", + "ax4.set_title(R\"Chew-Mandelstam $\\rho^\\mathrm{CM}(m^2)$\", y=0.85)\n", + "\n", + "LINES = None\n", + "\n", + "\n", + "def plot(m1, m2):\n", + " global LINES\n", + " if LINES is None:\n", + " style = dict(alpha=0.7)\n", + " LINES = [\n", + " ax1.plot(x, q_func(x, m1, m2).real, **style, label=\"real\")[0],\n", + " ax1.plot(x, q_func(x, m1, m2).imag, **style, label=\"imag\")[0],\n", + " ax2.plot(x, rho_c_func(x, m1, m2).real, **style, label=\"real\")[0],\n", + " ax2.plot(x, rho_c_func(x, m1, m2).imag, **style, label=\"imag\")[0],\n", + " ax3.plot(x, rho_ac_func(x, m1, m2).real, **style, label=\"real\")[0],\n", + " ax3.plot(x, rho_ac_func(x, m1, m2).imag, **style, label=\"imag\")[0],\n", + " ax4.plot(x, rho_cm_func(x, m1, m2).real, **style, label=\"real\")[0],\n", + " ax4.plot(x, rho_cm_func(x, m1, m2).imag, **style, label=\"imag\")[0],\n", + " ]\n", + " else:\n", + " LINES[0].set_ydata(q_func(x, m1, m2).real)\n", + " LINES[1].set_ydata(q_func(x, m1, m2).imag)\n", + " LINES[2].set_ydata(rho_c_func(x, m1, m2).real)\n", + " LINES[3].set_ydata(rho_c_func(x, m1, m2).imag)\n", + " LINES[4].set_ydata(rho_ac_func(x, m1, m2).real)\n", + " LINES[5].set_ydata(rho_ac_func(x, m1, m2).imag)\n", + " LINES[6].set_ydata(rho_cm_func(x, m1, m2).real)\n", + " LINES[7].set_ydata(rho_cm_func(x, m1, m2).imag)\n", + "\n", + "\n", + "output = w.interactive_output(plot, controls=sliders)\n", + "ax2.legend(loc=\"upper right\")\n", + "plt.show()\n", + "display(UI, output)" ] } ], @@ -924,7 +805,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.13.11" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/dynamics/custom.ipynb b/docs/usage/dynamics/custom.ipynb index afcffe7e..61b39e0d 100644 --- a/docs/usage/dynamics/custom.ipynb +++ b/docs/usage/dynamics/custom.ipynb @@ -1,62 +1,14 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Custom dynamics\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Custom dynamics" - ] - }, { "cell_type": "code", "execution_count": null, @@ -73,16 +25,15 @@ }, "outputs": [], "source": [ - "%config InlineBackend.figure_formats = ['svg']\n", - "\n", - "from __future__ import annotations\n", - "\n", "import graphviz\n", "import qrules\n", "import sympy as sp\n", "from IPython.display import Math\n", + "from matplotlib_inline.backend_inline import set_matplotlib_formats\n", + "\n", + "from ampform.io import aslatex\n", "\n", - "from ampform.io import aslatex" + "set_matplotlib_formats(\"svg\")" ] }, { @@ -352,7 +303,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.11.8" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/dynamics/k-matrix.ipynb b/docs/usage/dynamics/k-matrix.ipynb index a5f5e8c0..6e4f6ac8 100644 --- a/docs/usage/dynamics/k-matrix.ipynb +++ b/docs/usage/dynamics/k-matrix.ipynb @@ -1,47 +1,5 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, @@ -54,13 +12,12 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# K-matrix" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ + "# K-matrix\n", + "\n", + "```{autolink-concat}\n", + "\n", + "```\n", + "\n", "" ] }, @@ -68,7 +25,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "While {mod}`ampform` does not yet provide a generic way to formulate an amplitude model with $\\boldsymbol{K}$-matrix dynamics, the (experimental) {mod}`.kmatrix` module makes it fairly simple to produce a symbolic expression for a parameterized $\\boldsymbol{K}$-matrix with an arbitrary number of poles and channels and play around with it interactively. For more info on the $\\boldsymbol{K}$-matrix, see the classic paper by Chung {cite}`Chung:1995dx`, {pdg-review}`2021; Resonances`, or this instructive presentation {cite}`meyerMatrixTutorial2008`.\n", + "While {mod}`ampform` does not yet provide a generic way to formulate an amplitude model with $\\boldsymbol{K}$-matrix dynamics, the (experimental) {mod}`.kmatrix` module makes it fairly simple to produce a symbolic expression for a parameterized $\\boldsymbol{K}$-matrix with an arbitrary number of poles and channels and play around with it interactively. For more info on the $\\boldsymbol{K}$-matrix, see the classic paper by Chung {cite}`Chung:1995dx`, {pdg-review}`2021; Resonances`, or this instructive presentation {cite}`Meyer:2008-MatrixTutorial`.\n", "\n", "Section {ref}`usage/dynamics/k-matrix:Physics` summarizes {cite}`Chung:1995dx`, so that the {mod}`.kmatrix` module can reference to the equations. It also points out some subtleties and deviations.\n", "\n", @@ -107,29 +64,48 @@ }, "outputs": [], "source": [ + "import inspect\n", "import logging\n", + "import os\n", "import re\n", "import warnings\n", "\n", "import graphviz\n", - "import ipywidgets\n", + "import ipywidgets as w\n", "import matplotlib.pyplot as plt\n", - "import mpl_interactions.ipyplot as iplt\n", "import numpy as np\n", "import sympy as sp\n", + "from ipympl.backend_nbagg import Canvas\n", "from IPython.display import Image, display\n", "from matplotlib import cm\n", - "from mpl_interactions.controller import Controls\n", + "from matplotlib.transforms import Bbox\n", + "\n", + "from ampform.dynamics import kmatrix, phasespace, relativistic_breit_wigner\n", + "from ampform.sympy import partial_doit, rename_symbols\n", + "from ampform.sympy.slider import create_slider, substitute_indexed_symbols\n", + "\n", + "\n", + "def hide_toolbar(canvas: Canvas) -> None:\n", + " canvas.toolbar_visible = False\n", + " canvas.header_visible = False\n", + " canvas.footer_visible = False\n", "\n", - "import symplot\n", - "from ampform.dynamics import PhaseSpaceFactor, kmatrix, relativistic_breit_wigner\n", "\n", + "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)\n", "logging.basicConfig()\n", "logging.getLogger().setLevel(logging.ERROR)\n", - "\n", "warnings.filterwarnings(\"ignore\")" ] }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "type(plt.subplots()[0].canvas)" + ] + }, { "cell_type": "markdown", "metadata": {}, @@ -244,8 +220,7 @@ "source": [ "The important point is that we have now expressed $A$ in terms of an angular part (depending on $\\Omega$) and a dynamical part $\\boldsymbol{T}$ that depends on the [Mandelstam variable](https://pwa.rtfd.io/physics/#mandelstam-variables) $s$.\n", "\n", - "\n", - "The dynamical part $\\boldsymbol{T}$ is usually called the **transition operator**. It describes the interacting part of the more general **scattering operator** $\\boldsymbol{S}$, which describes the (complex) amplitude $\\langle f|\\boldsymbol{S}|i\\rangle$ of an initial state $|i\\rangle$ transitioning to a final state $|f\\rangle$. The scattering operator describes both the non-interacting amplitude and the transition amplitude, so it relates to the transition operator as:\n", + "The dynamical part $\\boldsymbol{T}$ is usually called the **transition operator**. It describes the interacting part of the more general **scattering operator** $\\boldsymbol{S}$, which describes the (complex) amplitude $\\langle f|\\boldsymbol{S}|i\\rangle$ of an initial state $|i\\rangle$ transitioning to a final state $|f\\rangle$. The scattering operator describes both the non-interacting amplitude and the transition amplitude, so it relates to the transition operator as:\n", "\n", "```{margin}\n", "{cite}`Chung:1995dx` Eq. (10)\n", @@ -331,7 +306,7 @@ "\\end{eqnarray}\n", "$$ (K-hat-and-T-hat)\n", "\n", - "[^rho-dagger]: An unpublished primer on the $\\boldsymbol{K}$-matrix by Chung {cite}`chungPrimerKmatrixFormalism1995` uses a conjugate transpose of $\\boldsymbol{\\rho}$, e.g. $\\boldsymbol{T} = \\sqrt{\\boldsymbol{\\rho^\\dagger}} \\; \\boldsymbol{\\hat{T}} \\sqrt{\\boldsymbol{\\rho}}$. This should not matter above threshold, where the phase space factor is real, but could have effects below threshold. This is where things become tricky: on the one hand, we need to ensure that $\\boldsymbol{K}$ remains real (unitarity) and on the other, we need to take keep track of which imaginary square root we choose (**Riemann sheet**). The latter is often called the requirement of **analyticity**. This is currently being explored in {doc}`compwa-report:003/index` and {doc}`compwa-report:004/index`.\n", + "[^rho-dagger]: An unpublished primer on the $\\boldsymbol{K}$-matrix by Chung {cite}`Chung:1995-PrimerKmatrixFormalism` uses a conjugate transpose of $\\boldsymbol{\\rho}$, e.g. $\\boldsymbol{T} = \\sqrt{\\boldsymbol{\\rho^\\dagger}} \\; \\boldsymbol{\\hat{T}} \\sqrt{\\boldsymbol{\\rho}}$. This should not matter above threshold, where the phase space factor is real, but could have effects below threshold. This is where things become tricky: on the one hand, we need to ensure that $\\boldsymbol{K}$ remains real (unitarity) and on the other, we need to take keep track of which imaginary square root we choose (**Riemann sheet**). The latter is often called the requirement of **analyticity**. This is currently being explored in {doc}`compwa-report:003/index` and {doc}`compwa-report:004/index`.\n", "\n", "With these definitions, we can deduce that:\n", "\n", @@ -463,7 +438,7 @@ "source": [ "After all these matrix definitions, the final challenge is to choose a correct parametrization for the elements of $\\boldsymbol{K}$ and $P$ that accurately describes the resonances we observe.[^pole-vs-resonance] There are several choices, but a common one is the following summation over the **poles** $R$:[^complex-conjugate-parametrization]\n", "\n", - "[^complex-conjugate-parametrization]: Eqs. (51) and (52) in {cite}`chungPrimerKmatrixFormalism1995` take a complex conjugate of one of the residue functions and one of the phase space factors.\n", + "[^complex-conjugate-parametrization]: Eqs. (51) and (52) in {cite}`Chung:1995-PrimerKmatrixFormalism` take a complex conjugate of one of the residue functions and one of the phase space factors.\n", "\n", "```{margin}\n", "{cite}`Chung:1995dx` Eqs. (73) and (74)\n", @@ -656,7 +631,7 @@ "outputs": [], "source": [ "def remove_residue_constants(expression):\n", - " expression = symplot.substitute_indexed_symbols(expression)\n", + " expression = substitute_indexed_symbols(expression)\n", " residue_constants = filter(\n", " lambda s: re.match(r\"^\\\\?gamma\", s.name),\n", " expression.free_symbols,\n", @@ -674,9 +649,9 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "Now, just like in {doc}`/usage/interactive`, we use {mod}`symplot` to visualize the difference between the two expressions. The important thing is that the Argand plot on the right shows that **the $\\boldsymbol{K}$-matrix conserves unitarity**.\n", + "Now, just like in {doc}`/usage/interactive`, we use the {mod}`ampform.sympy.slider` module to visualize the difference between the two expressions. The important thing is that the Argand plot on the right shows that **the $\\boldsymbol{K}$-matrix conserves unitarity**.\n", "\n", - "Note that we have to call {func}`symplot.substitute_indexed_symbols` to turn the {class}`~sympy.tensor.indexed.Indexed` instances in this {obj}`~sympy.matrices.dense.Matrix` expression into {class}`~sympy.core.symbol.Symbol`s before calling this function. We also call {func}`symplot.rename_symbols` so that the residue $\\gamma$'s get a name that does not have to be dummified by {func}`~sympy.utilities.lambdify.lambdify`." + "Note that we have to call {func}`.substitute_indexed_symbols` to turn the {class}`~sympy.tensor.indexed.Indexed` instances in this {obj}`~sympy.matrices.dense.Matrix` expression into {class}`~sympy.core.symbol.Symbol`s before calling this function. We also call {func}`.rename_symbols` so that the residue $\\gamma$'s get a name that does not have to be dummified by {func}`~sympy.utilities.lambdify.lambdify`." ] }, { @@ -696,107 +671,90 @@ "source": [ "# Prepare expressions\n", "m = sp.Symbol(\"m\", nonnegative=True)\n", - "k_matrix = symplot.substitute_indexed_symbols(k_matrix)\n", - "rename_gammas = lambda s: re.sub( # noqa: E731\n", - " r\"\\\\([Gg])amma_{([0-9]),0}\", r\"\\1amma\\2\", s\n", - ")\n", + "k_matrix = substitute_indexed_symbols(k_matrix)\n", + "rename_gammas = lambda s: re.sub(r\"\\\\([Gg])amma_{([0-9]),0}\", r\"\\1amma\\2\", s) # noqa: E731\n", "gamma1, gamma2 = sp.symbols(\"gamma1 gamma2\", nonnegative=True)\n", - "bw = symplot.rename_symbols(bw, rename_gammas)\n", - "k_matrix = symplot.rename_symbols(k_matrix, rename_gammas)\n", + "bw = rename_symbols(bw, rename_gammas)\n", + "k_matrix = rename_symbols(k_matrix, rename_gammas)\n", "bw = bw.xreplace({s: m**2})\n", "k_matrix = k_matrix.xreplace({s: m**2})\n", "\n", "# Prepare sliders and domain\n", - "np_kmatrix, sliders = symplot.prepare_sliders(k_matrix, m)\n", - "np_bw = sp.lambdify((m, Gamma1, Gamma2, gamma1, gamma2, m1, m2), bw.doit())\n", + "args = (m, Gamma1, Gamma2, gamma1, gamma2, m1, m2)\n", + "np_bw_1d = sp.lambdify(args, bw.doit())\n", + "np_kmatrix = sp.lambdify(args, k_matrix.doit())\n", "\n", "m_min, m_max = 0, 3\n", "domain_1d = np.linspace(m_min, m_max, 200)\n", "domain_argand = np.linspace(m_min - 2, m_max + 2, 1_000)\n", - "sliders.set_ranges(\n", - " m1=(0, 3, 100),\n", - " m2=(0, 3, 100),\n", - " Gamma1=(0, 2, 100),\n", - " Gamma2=(0, 2, 100),\n", - " gamma1=(0, 2),\n", - " gamma2=(0, 2),\n", - ")\n", - "sliders.set_values(\n", - " m1=1.1,\n", - " m2=1.9,\n", - " Gamma1=0.2,\n", - " Gamma2=0.3,\n", - " gamma1=1,\n", - " gamma2=1,\n", - ")\n", - "if STATIC_WEB_PAGE:\n", - " # Concatenate flipped domain for reverse animation\n", - " domain = np.linspace(1.0, 2.7, 50)\n", - " domain = np.concatenate((domain, np.flip(domain[1:])))\n", - " sliders._sliders[\"m1\"] = domain\n", - "\n", - "\n", - "def create_argand(func):\n", - " def wrapped(**kwargs):\n", - " values = func(domain_argand, **kwargs)\n", - " argand = np.array([values.real, values.imag])\n", - " return argand.T\n", - "\n", - " return wrapped\n", - "\n", + "sliders = {str(s): create_slider(s, max=2, step=0.01, value=1) for s in args[1:]}\n", + "sliders[\"m1\"].max = 3\n", + "sliders[\"m2\"].max = 3\n", + "sliders[\"m1\"].value = 1.1\n", + "sliders[\"m2\"].value = 1.9\n", + "sliders[\"Gamma1\"].value = 0.2\n", + "sliders[\"Gamma2\"].value = 0.3\n", + "UI = w.VBox(list(sliders.values()))\n", "\n", "# Create figure\n", "fig, axes = plt.subplots(\n", " ncols=2,\n", " figsize=1.2 * np.array((8, 3.8)),\n", - " tight_layout=True,\n", ")\n", - "ax_intensity, ax_argand = axes\n", + "hide_toolbar(fig.canvas)\n", + "ax1, ax2 = axes.ravel()\n", "m_label = \"$m_{a+b}$\"\n", - "ax_intensity.set_xlabel(m_label)\n", - "ax_intensity.set_ylabel(\"$|A|^2$\")\n", - "ax_argand.set_xlabel(\"Re($A$)\")\n", - "ax_argand.set_ylabel(\"Im($A$)\")\n", - "\n", - "# Plot intensity\n", - "controls = iplt.plot(\n", - " domain_1d,\n", - " lambda *args, **kwargs: np.abs(np_kmatrix(*args, **kwargs) ** 2),\n", - " label=\"$K$-matrix\",\n", - " **sliders,\n", - " ylim=\"auto\",\n", - " ax=ax_intensity,\n", - ")\n", - "iplt.plot(\n", - " domain_1d,\n", - " lambda *args, **kwargs: np.abs(np_bw(*args, **kwargs) ** 2),\n", - " label=\"Breit-Wigner\",\n", - " controls=controls,\n", - " ylim=\"auto\",\n", - " ax=ax_intensity,\n", - ")\n", - "plt.legend(loc=\"upper right\")\n", - "iplt.axvline(controls[\"m1\"], c=\"gray\", linestyle=\"dotted\")\n", - "iplt.axvline(controls[\"m2\"], c=\"gray\", linestyle=\"dotted\")\n", + "ax1.set_xlabel(m_label)\n", + "ax1.set_ylabel(\"$|A|^2$\")\n", + "ax2.set_xlabel(\"Re($A$)\")\n", + "ax2.set_ylabel(\"Im($A$)\")\n", + "for ax in axes.ravel():\n", + " ax.spines[\"left\"].set_position(\"zero\")\n", + " ax.spines[\"bottom\"].set_position(\"zero\")\n", + " ax.spines[\"top\"].set_visible(False)\n", + " ax.spines[\"right\"].set_visible(False)\n", + "\n", + "LINES_BW = None\n", + "\n", + "\n", + "def plot_bw_sum(**kwargs):\n", + " global LINES_BW\n", + " z_bw = np_bw_1d(domain_1d, **kwargs)\n", + " z_kmatrix = np_kmatrix(domain_1d, **kwargs)\n", + " y_bw = np.abs(z_bw) ** 2\n", + " y_kmatrix = np.abs(z_kmatrix) ** 2\n", + " if LINES_BW is None:\n", + " LINES_BW = [\n", + " ax1.plot(domain_1d, y_kmatrix, label=\"$K$-matrix\")[0],\n", + " ax1.plot(domain_1d, y_bw, label=\"Breit-Wigner\")[0],\n", + " ax1.axvline(kwargs[\"m1\"], c=\"gray\", ls=\"dotted\"),\n", + " ax1.axvline(kwargs[\"m2\"], c=\"gray\", ls=\"dotted\"),\n", + " ax2.scatter(z_kmatrix.real, z_kmatrix.imag, label=\"$K$-matrix\", s=1),\n", + " ax2.scatter(z_bw.real, z_bw.imag, label=\"Breit-Wigner\", s=1),\n", + " ]\n", + " else:\n", + " LINES_BW[0].set_ydata(y_kmatrix)\n", + " LINES_BW[1].set_ydata(y_bw)\n", + " LINES_BW[2].set_xdata([kwargs[\"m1\"]])\n", + " LINES_BW[3].set_xdata([kwargs[\"m2\"]])\n", + " LINES_BW[4].set_offsets(np.stack([z_kmatrix.real, z_kmatrix.imag]).T)\n", + " LINES_BW[5].set_offsets(np.stack([z_bw.real, z_bw.imag]).T)\n", + " ax1.relim()\n", + " ax1.autoscale_view()\n", + " ax2.ignore_existing_data_limits = True\n", + " bbox = Bbox.union([\n", + " LINES_BW[4].get_datalim(ax2.transData),\n", + " LINES_BW[5].get_datalim(ax2.transData),\n", + " ])\n", + " ax2.update_datalim(bbox)\n", + " ax2.autoscale_view()\n", + "\n", "\n", "# Argand plots\n", - "iplt.scatter(\n", - " create_argand(np_kmatrix),\n", - " label=\"$K$-matrix\",\n", - " controls=controls,\n", - " parametric=True,\n", - " s=1,\n", - " ax=ax_argand,\n", - ")\n", - "iplt.scatter(\n", - " create_argand(np_bw),\n", - " label=\"Breit-Wigner\",\n", - " controls=controls,\n", - " parametric=True,\n", - " s=1,\n", - " ax=ax_argand,\n", - ")\n", - "plt.legend(loc=\"upper right\");" + "output = w.interactive_output(plot_bw_sum, controls=sliders)\n", + "ax2.legend(loc=\"upper right\")\n", + "plt.show()\n", + "display(UI, output)" ] }, { @@ -820,13 +778,52 @@ "outputs": [], "source": [ "if STATIC_WEB_PAGE:\n", + " from IPython.display import Image, display\n", + " from matplotlib.animation import FuncAnimation, PillowWriter\n", + " from tqdm.auto import tqdm\n", + "\n", + " def frame_generator():\n", + " while True:\n", + " if not forward and animated_slider.value <= start:\n", + " return\n", + " yield\n", + "\n", + " def animate(_):\n", + " global forward\n", + " if animated_slider.value >= end:\n", + " forward = False\n", + " if forward:\n", + " animated_slider.value += step * animated_slider.step\n", + " else:\n", + " animated_slider.value -= step * animated_slider.step\n", + " fig.canvas.draw_idle()\n", + " pbar.set_postfix_str(f\"value={animated_slider.value:g}\")\n", + " pbar.update()\n", + "\n", + " ax1.set_ylim([0, 2])\n", + " ax2.set_xlim([-1, +1])\n", + " ax2.set_ylim([0, 2])\n", + "\n", + " animated_slider = sliders[\"m1\"]\n", + " start = max(1.0, animated_slider.min)\n", + " end = min(2.7, animated_slider.max)\n", + " step = 3\n", + "\n", + " forward = True\n", + " animated_slider.value = start\n", + " pbar = tqdm(desc=\"Exporting animation\", leave=False)\n", " output_path = \"non-relativistic-k-matrix.gif\"\n", - " ax_intensity.set_ylim([0, 2])\n", - " ax_argand.set_xlim([-1, +1])\n", - " ax_argand.set_ylim([0, 2])\n", - " controls.save_animation(output_path, fig, \"m1\", fps=20)\n", + " animation = FuncAnimation(\n", + " fig,\n", + " animate,\n", + " cache_frame_data=False,\n", + " frames=frame_generator(),\n", + " repeat=False,\n", + " )\n", + " animation.save(output_path, writer=PillowWriter(fps=20))\n", + " pbar.close()\n", " with open(output_path, \"rb\") as f:\n", - " display(Image(data=f.read(), format=\"png\"))" + " display(UI, Image(data=f.read(), format=\"png\"))" ] }, { @@ -873,7 +870,7 @@ "rel_k_matrix_1r = kmatrix.RelativisticKMatrix.formulate(\n", " n_poles=1, n_channels=1, angular_momentum=L\n", ")\n", - "symplot.partial_doit(rel_k_matrix_1r[0, 0], sp.Sum).simplify(doit=False)" + "partial_doit(rel_k_matrix_1r[0, 0], sp.Sum).simplify(doit=False)" ] }, { @@ -894,7 +891,7 @@ "rel_k_matrix_2r = kmatrix.RelativisticKMatrix.formulate(\n", " n_poles=2, n_channels=1, angular_momentum=L\n", ")\n", - "rel_k_matrix_2r = symplot.partial_doit(rel_k_matrix_2r[0, 0], sp.Sum)" + "rel_k_matrix_2r = partial_doit(rel_k_matrix_2r[0, 0], sp.Sum)" ] }, { @@ -911,9 +908,9 @@ }, "outputs": [], "source": [ - "rel_k_matrix_2r = symplot.substitute_indexed_symbols(rel_k_matrix_2r)\n", + "rel_k_matrix_2r = substitute_indexed_symbols(rel_k_matrix_2r)\n", "s, m_a, m_b = sp.symbols(\"s, m_a0, m_b0\", nonnegative=True)\n", - "rho = PhaseSpaceFactor(s, m_a, m_b)\n", + "rho = phasespace.PhaseSpaceFactor(s, m_a, m_b)\n", "rel_k_matrix_2r = rel_k_matrix_2r.xreplace({\n", " sp.sqrt(rho): 1,\n", " sp.conjugate(sp.sqrt(rho)): 1,\n", @@ -988,7 +985,7 @@ "outputs": [], "source": [ "f_vector_1r = kmatrix.NonRelativisticPVector.formulate(n_poles=1, n_channels=1)\n", - "symplot.partial_doit(f_vector_1r[0], sp.Sum)" + "partial_doit(f_vector_1r[0], sp.Sum)" ] }, { @@ -1007,7 +1004,7 @@ "rel_f_vector_1r = kmatrix.RelativisticPVector.formulate(\n", " n_poles=1, n_channels=1, angular_momentum=L\n", ")\n", - "rel_f_vector_1r = symplot.partial_doit(rel_f_vector_1r[0], sp.Sum)" + "rel_f_vector_1r = partial_doit(rel_f_vector_1r[0], sp.Sum)" ] }, { @@ -1024,9 +1021,9 @@ }, "outputs": [], "source": [ - "rel_f_vector_1r = symplot.substitute_indexed_symbols(rel_f_vector_1r)\n", + "rel_f_vector_1r = substitute_indexed_symbols(rel_f_vector_1r)\n", "s, m_a, m_b = sp.symbols(\"s, m_a0, m_b0\", nonnegative=True)\n", - "rho = PhaseSpaceFactor(s, m_a, m_b)\n", + "rho = phasespace.PhaseSpaceFactor(s, m_a, m_b)\n", "rel_f_vector_1r.xreplace({\n", " sp.sqrt(rho): 1,\n", " sp.conjugate(sp.sqrt(rho)): 1,\n", @@ -1118,13 +1115,13 @@ "outputs": [], "source": [ "# Prepare expressions\n", - "f_vector = symplot.substitute_indexed_symbols(f_vector)\n", + "f_vector = substitute_indexed_symbols(f_vector)\n", "rename_gammas = lambda s: re.sub( # noqa: E731\n", " r\"\\\\([Gg])amma_{([0-9]),0}\", r\"\\1amma\\2\", s\n", ")\n", "c1, c2, phi1, phi2 = sp.symbols(\"c1 c2 phi1 phi2\", real=True)\n", - "bw_with_phases = symplot.rename_symbols(bw_with_phases, rename_gammas)\n", - "f_vector = symplot.rename_symbols(f_vector, rename_gammas)\n", + "bw_with_phases = rename_symbols(bw_with_phases, rename_gammas)\n", + "f_vector = rename_symbols(f_vector, rename_gammas)\n", "substitutions = {\n", " s: m**2,\n", " beta1: c1 * sp.exp(sp.I * phi1),\n", @@ -1134,77 +1131,60 @@ "f_vector = f_vector.xreplace(substitutions)\n", "\n", "# Prepare sliders and domain\n", - "np_f_vector, sliders = symplot.prepare_sliders(f_vector, m)\n", - "np_bw = sp.lambdify(\n", - " (m, Gamma1, Gamma2, c1, c2, gamma1, gamma2, m1, m2, phi1, phi2),\n", - " bw_with_phases.doit(),\n", - ")\n", + "args = (m, m1, m2, Gamma1, Gamma2, gamma1, gamma2, c1, c2, phi1, phi2)\n", + "np_f_vector = sp.lambdify(args, f_vector.doit())\n", + "np_bw = sp.lambdify(args, bw_with_phases.doit())\n", "\n", "# Set plot domain\n", "x_min, x_max = 0, 3\n", "y_min, y_max = -0.5, +0.5\n", - "plot_domain = np.linspace(x_min, x_max, num=150)\n", + "plot_domain = np.linspace(x_min, x_max, num=200)\n", "plot_domain_argand = np.linspace(x_min - 2, x_max + 2, num=400)\n", - "x_values = np.linspace(x_min, x_max, num=160)\n", - "y_values = np.linspace(y_min, y_max, num=80)\n", - "X, Y = np.meshgrid(x_values, y_values)\n", + "X, Y = np.meshgrid(\n", + " np.linspace(x_min, x_max, num=160),\n", + " np.linspace(y_min, y_max, num=80),\n", + ")\n", "plot_domain_complex = X + Y * 1j\n", "\n", "# Set slider values and ranges\n", - "sliders.set_ranges(\n", - " c1=(0, 2, 100),\n", - " c2=(0, 2, 100),\n", - " phi1=(0, np.pi, np.pi / 20),\n", - " phi2=(0, np.pi, np.pi / 20),\n", - " m1=(0, 3, 300),\n", - " m2=(0, 3, 300),\n", - " Gamma1=(-2, 2, 100),\n", - " Gamma2=(-2, 2, 100),\n", - " gamma1=(-1, +1, 100),\n", - " gamma2=(-1, +1, 100),\n", - ")\n", - "sliders.set_values(\n", - " c1=1,\n", - " c2=1,\n", - " m1=1.4,\n", - " m2=1.7,\n", - " Gamma1=0.2,\n", - " Gamma2=0.3,\n", - " gamma1=1 / np.sqrt(2),\n", - " gamma2=1 / np.sqrt(2),\n", - ")\n", - "\n", - "\n", - "def create_argand(func):\n", - " def wrapped(**kwargs):\n", - " values = func(plot_domain_argand, **kwargs)\n", - " argand = np.array([values.real, values.imag])\n", - " return argand.T\n", - "\n", - " return wrapped\n", - "\n", + "sliders = {str(s): create_slider(s, max=2, step=0.01) for s in args[1:]}\n", + "sliders[\"m1\"].max = 3\n", + "sliders[\"m2\"].max = 3\n", + "sliders[\"m1\"].value = 1.4\n", + "sliders[\"m2\"].value = 1.7\n", + "for key in (\"phi1\", \"phi2\"):\n", + " sliders[key].max = np.pi\n", + " sliders[key].step = np.pi / 20\n", + "for key in (\"gamma1\", \"gamma2\"):\n", + " sliders[key].min = -1\n", + " sliders[key].max = +1\n", + "sliders[\"c1\"].value = 1\n", + "sliders[\"c2\"].value = 1\n", + "sliders[\"Gamma1\"].value = 0.2\n", + "sliders[\"Gamma2\"].value = 0.3\n", + "sliders[\"gamma1\"].value = 1 / np.sqrt(2)\n", + "sliders[\"gamma2\"].value = 1 / np.sqrt(2)\n", "\n", "# Create figure\n", "fig, axes = plt.subplots(\n", - " nrows=3,\n", - " ncols=2,\n", - " figsize=(10, 9),\n", + " figsize=(10, 7),\n", " gridspec_kw=dict(\n", - " width_ratios=[2.5, 1],\n", - " wspace=0.08,\n", + " bottom=0.07,\n", " left=0.05,\n", " right=0.99,\n", " top=0.99,\n", - " bottom=0.05,\n", + " width_ratios=[2.5, 1],\n", + " hspace=0.05,\n", + " wspace=0.08,\n", " ),\n", + " nrows=3,\n", + " ncols=2,\n", ")\n", - "fig.canvas.toolbar_visible = False\n", - "fig.canvas.header_visible = False\n", - "fig.canvas.footer_visible = False\n", - "(ax_1d, ax_argand), (ax_2d, ax_empty1), (ax_2d_bw, ax_empty2) = axes\n", + "hide_toolbar(fig.canvas)\n", + "ax_1d, ax_argand, ax_2d, ax_empty1, ax_2d_bw, ax_empty2 = axes.ravel()\n", "ax_empty1.axis(\"off\")\n", "ax_empty2.axis(\"off\")\n", - "for ax in axes.flatten():\n", + "for ax in axes.ravel():\n", " ax.set_yticks([])\n", "ax_argand.set_xticks([])\n", "ax_1d.axes.get_xaxis().set_visible(False)\n", @@ -1215,71 +1195,56 @@ "for ax in (ax_2d, ax_2d_bw):\n", " ax.set_ylabel(\"Im $m$\")\n", "ax_1d.set_ylabel(\"$|A|^2$\")\n", - "ax_argand.set_xlabel(\"Re($A$)\")\n", - "ax_argand.set_ylabel(\"Im($A$)\")\n", + "ax_argand.set_xlabel(\"Re $A$\")\n", + "ax_argand.set_ylabel(\"Im $A$\")\n", + "for ax in (ax_1d, ax_argand):\n", + " ax.spines[\"left\"].set_position(\"zero\")\n", + " ax.spines[\"bottom\"].set_position(\"zero\")\n", + " ax.spines[\"top\"].set_visible(False)\n", + " ax.spines[\"right\"].set_visible(False)\n", "\n", "for ax in (ax_2d, ax_2d_bw):\n", " ax.axhline(0, linewidth=0.5, c=\"black\", linestyle=\"dotted\")\n", - "\n", - "# 1D intensity plot\n", - "controls = Controls(**sliders)\n", - "controls = iplt.plot(\n", - " plot_domain,\n", - " lambda *args, **kwargs: np.abs(np_f_vector(*args, **kwargs) ** 2),\n", - " label=\"$P$-vector\",\n", - " controls=controls,\n", - " ylim=\"auto\",\n", - " ax=ax_1d,\n", - ")\n", - "iplt.plot(\n", - " plot_domain,\n", - " lambda *args, **kwargs: np.abs(np_bw(*args, **kwargs) ** 2),\n", - " label=\"Breit-Wigner\",\n", - " controls=controls,\n", - " ylim=\"auto\",\n", - " ax=ax_1d,\n", - ")\n", - "ax_1d.legend(loc=\"upper right\")\n", - "mass_line_style = dict(\n", - " c=\"red\",\n", - " alpha=0.3,\n", - ")\n", - "for name in controls.params:\n", - " if not re.match(r\"^m[0-9]+$\", name):\n", - " continue\n", - " iplt.axvline(controls[name], ax=ax_1d, **mass_line_style)\n", - "\n", - "# Argand plot\n", - "iplt.scatter(\n", - " create_argand(np_f_vector),\n", - " label=\"$P$-vector\",\n", - " controls=controls,\n", - " parametric=True,\n", - " s=1,\n", - " ax=ax_argand,\n", - " xlim=\"auto\",\n", - " ylim=\"auto\",\n", - ")\n", - "iplt.scatter(\n", - " create_argand(np_bw),\n", - " label=\"Breit-Wigner\",\n", - " controls=controls,\n", - " parametric=True,\n", - " s=1,\n", - " ax=ax_argand,\n", - " xlim=\"auto\",\n", - " ylim=\"auto\",\n", - ")\n", + "mass_line_style = dict(alpha=0.3, color=\"red\")\n", "\n", "# 3D plot\n", - "color_mesh = None\n", - "color_mesh_bw = None\n", "pole_indicators = []\n", "pole_indicators_bw = []\n", + "lines_1d = None\n", + "meshes = None\n", "\n", "\n", "def plot3(*, z_cutoff, complex_rendering, **kwargs):\n", - " global color_mesh, color_mesh_bw\n", + " global lines_1d, meshes\n", + "\n", + " z_bw = np_bw(plot_domain, **kwargs)\n", + " z_f_vector = np_f_vector(plot_domain, **kwargs)\n", + " if lines_1d is None:\n", + " lines_1d = [\n", + " ax_1d.plot(plot_domain, np.abs(z_f_vector) ** 2, label=\"$P$-vector\")[0],\n", + " ax_1d.plot(plot_domain, np.abs(z_bw) ** 2, label=\"Breit–Wigner\")[0],\n", + " ax_1d.axvline(kwargs[\"m1\"], **mass_line_style),\n", + " ax_1d.axvline(kwargs[\"m2\"], **mass_line_style),\n", + " ax_argand.scatter(z_f_vector.real, z_f_vector.imag, s=1),\n", + " ax_argand.scatter(z_bw.real, z_bw.imag, s=1),\n", + " ]\n", + " else:\n", + " lines_1d[0].set_ydata(np.abs(z_f_vector) ** 2)\n", + " lines_1d[1].set_ydata(np.abs(z_bw) ** 2)\n", + " lines_1d[2].set_xdata([kwargs[\"m1\"]])\n", + " lines_1d[3].set_xdata([kwargs[\"m2\"]])\n", + " lines_1d[4].set_offsets(np.stack([z_f_vector.real, z_f_vector.imag]).T)\n", + " lines_1d[5].set_offsets(np.stack([z_bw.real, z_bw.imag]).T)\n", + " ax_1d.relim()\n", + " ax_1d.autoscale_view()\n", + " ax_argand.ignore_existing_data_limits = True\n", + " box = Bbox.union([\n", + " lines_1d[4].get_datalim(ax_argand.transData),\n", + " lines_1d[5].get_datalim(ax_argand.transData),\n", + " ])\n", + " ax_argand.update_datalim(box)\n", + " ax_argand.autoscale_view()\n", + "\n", " Z = np_f_vector(plot_domain_complex, **kwargs)\n", " Z_bw = np_bw(plot_domain_complex, **kwargs)\n", " if complex_rendering == \"imag\":\n", @@ -1293,28 +1258,27 @@ " ax_title = \"$|A|$\"\n", " else:\n", " raise NotImplementedError\n", - " ax_2d.set_title(ax_title + \" ($P$-vector)\")\n", - " ax_2d_bw.set_title(ax_title + \" (Breit-Wigner)\")\n", - "\n", - " if color_mesh is None:\n", - " color_mesh = ax_2d.pcolormesh(X, Y, projection(Z), cmap=cm.coolwarm)\n", - " else:\n", - " color_mesh.set_array(projection(Z))\n", - " color_mesh.set_clim(vmin=-z_cutoff, vmax=+z_cutoff)\n", - "\n", - " if color_mesh_bw is None:\n", - " color_mesh_bw = ax_2d_bw.pcolormesh(X, Y, projection(Z_bw), cmap=cm.coolwarm)\n", + " ax_2d.set_title(ax_title + \" ($P$-vector)\", y=0.87)\n", + " ax_2d_bw.set_title(ax_title + \" (Breit–Wigner)\", y=0.87)\n", + "\n", + " if meshes is None:\n", + " meshes = [\n", + " ax_2d.pcolormesh(X, Y, projection(Z), cmap=\"RdBu\"),\n", + " ax_2d_bw.pcolormesh(X, Y, projection(Z_bw), cmap=\"RdBu\"),\n", + " ]\n", " else:\n", - " color_mesh_bw.set_array(projection(Z_bw))\n", - " color_mesh_bw.set_clim(vmin=-z_cutoff, vmax=+z_cutoff)\n", + " meshes[0].set_array(projection(Z))\n", + " meshes[1].set_array(projection(Z_bw))\n", + " for mesh in meshes:\n", + " mesh.set_clim(vmin=-z_cutoff, vmax=+z_cutoff)\n", "\n", " if pole_indicators:\n", " for R, (line, text) in enumerate(pole_indicators, 1):\n", " mass = kwargs[f\"m{R}\"]\n", - " line.set_xdata(mass)\n", + " line.set_xdata([mass])\n", " text.set_x(mass + (x_max - x_min) * 0.008)\n", " else:\n", - " for R in range(1, 2 + 1):\n", + " for R in (1, 2):\n", " mass = kwargs[f\"m{R}\"]\n", " line = ax_2d.axvline(mass, **mass_line_style)\n", " text = ax_2d.text(\n", @@ -1328,7 +1292,7 @@ " if pole_indicators_bw:\n", " for R, (line, text) in enumerate(pole_indicators_bw, 1):\n", " mass = kwargs[f\"m{R}\"]\n", - " line.set_xdata(mass)\n", + " line.set_xdata([mass])\n", " text.set_x(mass + (x_max - x_min) * 0.008)\n", " else:\n", " for R in range(1, 2 + 1):\n", @@ -1344,23 +1308,19 @@ "\n", "\n", "# Create switch for imag/real/abs\n", - "name = \"complex_rendering\"\n", - "sliders._sliders[name] = ipywidgets.RadioButtons(\n", - " options=[\"imag\", \"real\", \"abs\"],\n", + "sliders[\"complex_rendering\"] = w.RadioButtons(\n", " description=R\"\\(s\\)-plane plot\",\n", + " options=[\"imag\", \"real\", \"abs\"],\n", ")\n", - "sliders._arg_to_symbol[name] = name\n", "\n", "# Create cut-off slider for z-direction\n", - "name = \"z_cutoff\"\n", - "sliders._sliders[name] = ipywidgets.FloatSlider(\n", - " value=2,\n", + "sliders[\"z_cutoff\"] = w.FloatSlider(\n", + " description=R\"\\(z\\)-cutoff\",\n", " min=0,\n", " max=+5,\n", " step=0.1,\n", - " description=R\"\\(z\\)-cutoff\",\n", + " value=2,\n", ")\n", - "sliders._arg_to_symbol[name] = name\n", "\n", "# Create GUI\n", "sliders_copy = dict(sliders)\n", @@ -1375,13 +1335,14 @@ " ]\n", " slider_groups.append(vertical_slider_group)\n", "slider_pairs = np.array(slider_groups).T\n", - "h_boxes = [ipywidgets.HBox(tuple(pair)) for pair in slider_pairs]\n", + "h_boxes = [w.HBox(tuple(pair)) for pair in slider_pairs]\n", "remaining_sliders = sorted(\n", " sliders_copy.values(),\n", " key=lambda s: (str(type(s)), s.description),\n", ")\n", - "ui = ipywidgets.VBox(h_boxes + remaining_sliders)\n", - "output = ipywidgets.interactive_output(plot3, controls=sliders)\n", + "ui = w.VBox(h_boxes + remaining_sliders)\n", + "output = w.interactive_output(plot3, controls=sliders)\n", + "ax_1d.legend(loc=\"upper right\")\n", "display(ui, output)" ] }, @@ -1401,7 +1362,7 @@ "source": [ "if STATIC_WEB_PAGE:\n", " output_path = \"p-vector-comparison.png\"\n", - " plt.savefig(output_path, dpi=150)\n", + " plt.savefig(output_path)\n", " display(Image(output_path))" ] }, @@ -1449,10 +1410,9 @@ " n_channels: int,\n", " n_poles: int,\n", " angular_momentum=0,\n", - " phsp_factor=PhaseSpaceFactor,\n", + " phsp_factor=phasespace.PhaseSpaceFactor,\n", " substitute_sqrt_rho: bool = False,\n", ") -> None:\n", - " # Convert to Symbol: symplot cannot handle IndexedBase\n", " i, j = sp.symbols(\"i, j\", integer=True, negative=False)\n", " j = i\n", " expr = kmatrix_type.formulate(\n", @@ -1461,7 +1421,7 @@ " angular_momentum=angular_momentum,\n", " phsp_factor=phsp_factor,\n", " ).doit()[i, j]\n", - " expr = symplot.substitute_indexed_symbols(expr)\n", + " expr = substitute_indexed_symbols(expr)\n", " if substitute_sqrt_rho:\n", "\n", " def rho_i(i):\n", @@ -1471,171 +1431,148 @@ " sp.sqrt(rho_i(i)): 1 for i in range(n_channels)\n", " }).xreplace({sp.conjugate(sp.sqrt(rho_i(i))): 1 for i in range(n_channels)})\n", " expr = expr.xreplace({s: m**2})\n", - " expr = symplot.substitute_indexed_symbols(expr)\n", - " np_expr, sliders = symplot.prepare_sliders(expr, m)\n", + " expr = substitute_indexed_symbols(expr)\n", + " args = [m, *sorted(expr.free_symbols - {m}, key=str)]\n", + " func = sp.lambdify(args, expr)\n", + " to_args = {\n", + " str(s): arg\n", + " for s, arg in zip(args, inspect.signature(func).parameters, strict=True)\n", + " }\n", + " sliders = {str(s): create_slider(s, max=1, step=0.01) for s in args[1:]}\n", "\n", " # Set plot domain\n", " x_min, x_max = 1e-3, 3\n", " y_min, y_max = -0.5, +0.5\n", "\n", - " plot_domain = np.linspace(x_min, x_max, num=500, dtype=np.complex128)\n", - " x_values = np.linspace(x_min, x_max, num=160)\n", - " y_values = np.linspace(y_min, y_max, num=80)\n", - " X, Y = np.meshgrid(x_values, y_values)\n", - " plot_domain_complex = X + Y * 1j\n", + " x = np.linspace(x_min, x_max, num=500) + 1e-8j\n", + " X, Y = np.meshgrid(\n", + " np.linspace(x_min, x_max, num=160),\n", + " np.linspace(y_min, y_max, num=80),\n", + " )\n", + " XY = X + Y * 1j\n", "\n", " # Set slider values and ranges\n", " m0_values = np.linspace(x_min, x_max, num=n_poles + 2)\n", " m0_values = m0_values[1:-1]\n", " if \"L\" in sliders:\n", - " sliders.set_ranges(L=(0, 10))\n", - " sliders.set_ranges(i=(0, n_channels - 1))\n", + " sliders[\"L\"].min = 0\n", + " sliders[\"L\"].max = 10\n", + " sliders[\"i\"].min = 0\n", + " sliders[\"i\"].max = n_channels - 1\n", + " gamma_default = 1 / np.sqrt(n_channels * n_poles)\n", " for R in range(1, n_poles + 1):\n", " for i in range(n_channels):\n", " if kmatrix_type in {\n", " kmatrix.RelativisticKMatrix,\n", " kmatrix.RelativisticPVector,\n", " }:\n", - " sliders.set_ranges({\n", - " f\"m{R}\": (0, 3, 100),\n", - " Rf\"\\Gamma_{{{R},{i}}}\": (-1.5, +1.5, 100),\n", - " Rf\"\\gamma_{{{R},{i}}}\": (-1, 1, 100),\n", - " f\"m_a{i}\": (0, 1, 0.01),\n", - " f\"m_b{i}\": (0, 1, 0.01),\n", - " })\n", - " sliders.set_values({\n", - " f\"m{R}\": m0_values[R - 1],\n", - " Rf\"\\Gamma_{{{R},{i}}}\": 0.35 + R * 0.2 - i * 0.3,\n", - " Rf\"\\gamma_{{{R},{i}}}\": 1 / np.sqrt(n_channels * n_poles),\n", - " f\"m_a{i}\": (i + 1) * 0.25,\n", - " f\"m_b{i}\": (i + 1) * 0.25,\n", - " })\n", + " sliders[f\"m{R}\"].max = 3\n", + " sliders[f\"m{R}\"].value = m0_values[R - 1]\n", + " sliders[f\"m_a{i}\"].value = (i + 1) * 0.25\n", + " sliders[f\"m_b{i}\"].value = (i + 1) * 0.25\n", + " sliders[Rf\"\\Gamma_{{{R},{i}}}\"].value = 0.35 + R * 0.2 - i * 0.3\n", + " sliders[Rf\"\\Gamma_{{{R},{i}}}\"].min = -1.5\n", + " sliders[Rf\"\\Gamma_{{{R},{i}}}\"].max = +1.5\n", + " sliders[Rf\"\\gamma_{{{R},{i}}}\"].min = -1\n", + " sliders[Rf\"\\gamma_{{{R},{i}}}\"].value = gamma_default\n", " if kmatrix_type in {\n", - " kmatrix.NonRelativisticPVector,\n", " kmatrix.NonRelativisticKMatrix,\n", + " kmatrix.NonRelativisticPVector,\n", " }:\n", - " sliders.set_ranges({\n", - " f\"m{R}\": (0, 3, 100),\n", - " Rf\"\\Gamma_{{{R},{i}}}\": (-1, 1, 100),\n", - " Rf\"\\gamma_{{{R},{i}}}\": (-1, 1, 100),\n", - " })\n", - " sliders.set_values({\n", - " f\"m{R}\": m0_values[R - 1],\n", - " Rf\"\\Gamma_{{{R},{i}}}\": (R + 1) * 0.1,\n", - " Rf\"\\gamma_{{{R},{i}}}\": 1 / np.sqrt(n_channels * n_poles),\n", - " })\n", + " sliders[f\"m{R}\"].max = 3\n", + " sliders[f\"m{R}\"] = m0_values[R - 1]\n", + " sliders[Rf\"\\Gamma_{{{R},{i}}}\"].min = -1\n", + " sliders[Rf\"\\gamma_{{{R},{i}}}\"].min = -1\n", + " sliders[Rf\"\\Gamma_{{{R},{i}}}\"].value = (R + 1) * 0.1\n", + " sliders[Rf\"\\gamma_{{{R},{i}}}\"].value = gamma_default\n", " if kmatrix_type in {\n", " kmatrix.NonRelativisticPVector,\n", " kmatrix.RelativisticPVector,\n", " }:\n", - " sliders.set_ranges({f\"beta{R}\": (-1, 1, 100)})\n", - " sliders.set_values({f\"beta{R}\": 1})\n", + " sliders[f\"beta{R}\"].min = -1\n", + " sliders[f\"beta{R}\"].value = 1\n", "\n", " # Create interactive plots\n", - " fig, axes = plt.subplots(\n", - " nrows=2,\n", - " figsize=(8, 6),\n", - " sharex=True,\n", - " tight_layout=True,\n", - " )\n", - " fig.canvas.toolbar_visible = False\n", - " fig.canvas.header_visible = False\n", - " fig.canvas.footer_visible = False\n", + " fig, axes = plt.subplots(figsize=(8, 6), nrows=2, sharex=True)\n", + " fig.subplots_adjust(bottom=0.09, left=0.08, hspace=0.06, right=0.99, top=0.9)\n", + " hide_toolbar(fig.canvas)\n", " if kmatrix_type in {\n", " kmatrix.NonRelativisticKMatrix,\n", " kmatrix.RelativisticKMatrix,\n", " }:\n", - " fig.suptitle(\n", - " Rf\"${n_channels} \\times {n_channels}$ $K$-matrix\"\n", - " f\" with {n_poles} resonances\"\n", + " suptitle = (\n", + " Rf\"${n_channels} \\times {n_channels}$ $K$-matrix with {n_poles} resonances\"\n", " )\n", " elif kmatrix_type in {\n", " kmatrix.NonRelativisticPVector,\n", " kmatrix.RelativisticPVector,\n", " }:\n", - " fig.suptitle(f\"$P$-vector for {n_channels} channels and {n_poles} resonances\")\n", + " suptitle = f\"$P$-vector for {n_channels} channels and {n_poles} resonances\"\n", + " fig.suptitle(suptitle, y=0.94)\n", "\n", " for ax in axes:\n", " ax.set_xlim(x_min, x_max)\n", - " ax_2d, ax_3d = axes\n", - " ax_2d.set_ylabel(\"$|T|^{2}$\")\n", - " ax_2d.set_yticks([])\n", - " ax_3d.set_xlabel(\"Re $m$\")\n", - " ax_3d.set_ylabel(\"Im $m$\")\n", - "\n", - " ax_3d.axhline(0, linewidth=0.5, c=\"black\", linestyle=\"dotted\")\n", - "\n", - " # 2D plot\n", - " def plot(channel: int):\n", - " def wrapped(*args, **kwargs) -> sp.Expr:\n", - " kwargs[\"i\"] = channel\n", - " return np.abs(np_expr(*args, **kwargs)) ** 2\n", - "\n", - " return wrapped\n", - "\n", - " controls = Controls(**sliders)\n", - " for i in range(n_channels):\n", - " iplt.plot(\n", - " plot_domain,\n", - " plot(i),\n", - " ax=axes[0],\n", - " controls=controls,\n", - " ylim=\"auto\",\n", - " label=f\"channel {i}\",\n", - " )\n", - " if n_channels > 1:\n", - " axes[0].legend(loc=\"upper right\")\n", - " mass_line_style = dict(\n", - " c=\"red\",\n", - " alpha=0.3,\n", - " )\n", - " for name in controls.params:\n", - " if not re.match(r\"^m[0-9]+$\", name):\n", - " continue\n", - " iplt.axvline(controls[name], ax=axes[0], **mass_line_style)\n", + " ax1, ax2 = axes.ravel()\n", + " ax1.set_ylabel(\"$|T|^{2}$\")\n", + " ax1.set_yticks([])\n", + " ax2.set_xlabel(\"Re $m$\")\n", + " ax2.set_ylabel(\"Im $m$\")\n", "\n", - " # 3D plot\n", - " color_mesh = None\n", + " ax2.axhline(0, linewidth=0.5, c=\"black\", linestyle=\"dotted\")\n", + "\n", + " mass_line_style = dict(alpha=0.3, color=\"red\")\n", + " lines_2d = None\n", + " mesh = None\n", " pole_indicators = []\n", " threshold_indicators = []\n", "\n", - " def plot3(*, z_cutoff, complex_rendering, **kwargs):\n", - " nonlocal color_mesh\n", - " Z = np_expr(plot_domain_complex, **kwargs)\n", + " def plot(*, z_cutoff, complex_rendering, **kwargs):\n", + " nonlocal lines_2d, mesh\n", + " func_kwargs = {to_args[k]: v for k, v in kwargs.items() if k in to_args}\n", + " Z = func(XY, **func_kwargs)\n", " if complex_rendering == \"imag\":\n", - " Z_values = Z.imag\n", + " Z = Z.imag\n", " ax_title = \"Im $T$\"\n", " elif complex_rendering == \"real\":\n", - " Z_values = Z.real\n", + " Z = Z.real\n", " ax_title = \"Re $T$\"\n", " elif complex_rendering == \"abs\":\n", - " Z_values = np.abs(Z)\n", + " Z = np.abs(Z)\n", " ax_title = \"$|T|$\"\n", " else:\n", " raise NotImplementedError\n", "\n", " if n_channels == 1:\n", - " axes[-1].set_title(ax_title)\n", + " ax2.set_title(ax_title, y=0.87)\n", " else:\n", " i = kwargs[\"i\"]\n", - " axes[-1].set_title(f\"{ax_title}, channel {i}\")\n", + " ax2.set_title(f\"{ax_title}, channel {i}\", y=0.87)\n", + "\n", + " y = np.abs(func(x, **func_kwargs)) ** 2\n", + " if lines_2d is None:\n", + " lines_2d = [\n", + " ax1.plot(x, y, label=f\"channel {i}\")[0] for i in range(n_channels)\n", + " ]\n", + " else:\n", + " for line in lines_2d:\n", + " line.set_ydata(y)\n", "\n", - " if color_mesh is None:\n", - " color_mesh = ax_3d.pcolormesh(X, Y, Z_values, cmap=cm.coolwarm)\n", + " if mesh is None:\n", + " mesh = ax2.pcolormesh(X, Y, Z, cmap=\"RdBu\")\n", " else:\n", - " color_mesh.set_array(Z_values)\n", - " color_mesh.set_clim(vmin=-z_cutoff, vmax=+z_cutoff)\n", + " mesh.set_array(Z)\n", + " mesh.set_clim(vmin=-z_cutoff, vmax=+z_cutoff)\n", "\n", " if pole_indicators:\n", " for R, (line, text) in enumerate(pole_indicators, 1):\n", " mass = kwargs[f\"m{R}\"]\n", - " line.set_xdata(mass)\n", + " line.set_xdata([mass])\n", " text.set_x(mass + (x_max - x_min) * 0.008)\n", " else:\n", " for R in range(1, n_poles + 1):\n", " mass = kwargs[f\"m{R}\"]\n", - " line = ax_3d.axvline(mass, **mass_line_style)\n", - " text = ax_3d.text(\n", + " line = ax2.axvline(mass, **mass_line_style)\n", + " text = ax2.text(\n", " x=mass + (x_max - x_min) * 0.008,\n", " y=0.95 * y_min,\n", " s=f\"$m_{R}$\",\n", @@ -1653,8 +1590,8 @@ " m_b = kwargs[f\"m_b{i}\"]\n", " s_thr = m_a + m_b\n", " m_diff = abs(m_a - m_b)\n", - " line_thr.set_xdata(s_thr)\n", - " line_diff.set_xdata(m_diff)\n", + " line_thr.set_xdata([s_thr])\n", + " line_diff.set_xdata([m_diff])\n", " text_thr.set_x(s_thr)\n", " text_diff.set_x(m_diff - x_offset)\n", " else:\n", @@ -1699,28 +1636,24 @@ " text_diff.set_alpha(0)\n", "\n", " # Create switch for imag/real/abs\n", - " name = \"complex_rendering\"\n", - " sliders._sliders[name] = ipywidgets.RadioButtons(\n", - " options=[\"imag\", \"real\", \"abs\"],\n", + " sliders[\"complex_rendering\"] = w.RadioButtons(\n", " description=R\"\\(s\\)-plane plot\",\n", + " options=[\"imag\", \"real\", \"abs\"],\n", " )\n", - " sliders._arg_to_symbol[name] = name\n", "\n", " # Create cut-off slider for z-direction\n", - " name = \"z_cutoff\"\n", - " sliders._sliders[name] = ipywidgets.FloatSlider(\n", - " value=1,\n", + " sliders[\"z_cutoff\"] = w.FloatSlider(\n", + " description=R\"\\(z\\)-cutoff\",\n", " min=+0.01,\n", " max=+5,\n", " step=0.01,\n", - " description=R\"\\(z\\)-cutoff\",\n", + " value=1,\n", " )\n", - " sliders._arg_to_symbol[name] = name\n", "\n", " # Link sliders\n", " if kmatrix_type is kmatrix.RelativisticKMatrix:\n", " for i in range(n_channels):\n", - " ipywidgets.dlink(\n", + " w.dlink(\n", " (sliders[f\"m_a{i}\"], \"value\"),\n", " (sliders[f\"m_b{i}\"], \"value\"),\n", " )\n", @@ -1732,18 +1665,21 @@ " buttons = [sliders_copy.pop(f\"m{R}\")]\n", " if n_channels == 1:\n", " buttons += [\n", - " sliders_copy.pop(sliders.symbol_to_arg[Rf\"\\Gamma_{{{R},0}}\"]),\n", - " sliders_copy.pop(sliders.symbol_to_arg[Rf\"\\gamma_{{{R},0}}\"]),\n", + " sliders_copy.pop(Rf\"\\Gamma_{{{R},0}}\"),\n", + " sliders_copy.pop(Rf\"\\gamma_{{{R},0}}\"),\n", " ]\n", - " h_box = ipywidgets.HBox(buttons)\n", + " h_box = w.HBox(buttons)\n", " h_boxes.append(h_box)\n", " remaining_sliders = sorted(\n", - " sliders_copy.values(), key=lambda s: (str(type(s)), s.description)\n", + " sliders_copy.values(),\n", + " key=lambda s: (str(type(s)), s.description),\n", " )\n", " if n_channels == 1:\n", " remaining_sliders.remove(sliders[\"i\"])\n", - " ui = ipywidgets.VBox(h_boxes + remaining_sliders)\n", - " output = ipywidgets.interactive_output(plot3, controls=sliders)\n", + " ui = w.VBox(h_boxes + remaining_sliders)\n", + " output = w.interactive_output(plot, controls=sliders)\n", + " if n_channels > 1:\n", + " ax1.legend(loc=\"upper right\")\n", " display(ui, output)" ] }, @@ -1768,8 +1704,8 @@ " kmatrix.RelativisticKMatrix,\n", " n_poles=2,\n", " n_channels=1,\n", - " angular_momentum=L,\n", - " phsp_factor=PhaseSpaceFactor,\n", + " angular_momentum=0,\n", + " phsp_factor=phasespace.PhaseSpaceFactor,\n", " substitute_sqrt_rho=False,\n", ")" ] @@ -1814,7 +1750,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.13.9" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/dynamics/riemann-sheets.ipynb b/docs/usage/dynamics/riemann-sheets.ipynb index 82d9b3ae..815cda10 100644 --- a/docs/usage/dynamics/riemann-sheets.ipynb +++ b/docs/usage/dynamics/riemann-sheets.ipynb @@ -205,7 +205,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "## Symbolic dispersion integral " + "## Symbolic dispersion integral" ] }, { @@ -416,14 +416,14 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "## Visualize sheets \n" + "## Visualize sheets" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "### 2D " + "### 2D" ] }, { @@ -607,7 +607,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "### Lineshape " + "### Lineshape" ] }, { @@ -741,7 +741,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.13.11" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/helicity/formalism.ipynb b/docs/usage/helicity/formalism.ipynb index 62fc2ec0..0c95a912 100644 --- a/docs/usage/helicity/formalism.ipynb +++ b/docs/usage/helicity/formalism.ipynb @@ -1,62 +1,14 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Helicity versus canonical\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Helicity versus canonical" - ] - }, { "cell_type": "code", "execution_count": null, @@ -102,7 +54,7 @@ "\n", ":::{tip}\n", "\n", - "For more information about the helicity formalism, see {cite}`chungSpinFormalismsUpdated2014`, {cite}`Richman:1984gh`, and {cite}`kutschkeAngularDistributionCookbook1996`.\n", + "For more information about the helicity formalism, see {cite}`Chung:2014-SpinFormalismsUpdated`, {cite}`Richman:1984gh`, and {cite}`Kutschke:1996-AngularDistributionCookbook`.\n", "\n", ":::\n", "\n", @@ -452,7 +404,7 @@ }, "language_info": { "name": "python", - "version": "3.8.17" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/helicity/spin-alignment.ipynb b/docs/usage/helicity/spin-alignment.ipynb index a62a2cd7..a0086c9f 100644 --- a/docs/usage/helicity/spin-alignment.ipynb +++ b/docs/usage/helicity/spin-alignment.ipynb @@ -1,62 +1,14 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Spin alignment\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Spin alignment" - ] - }, { "cell_type": "code", "execution_count": null, @@ -226,7 +178,7 @@ "builder_123 = ampform.get_builder(reaction_123)\n", "builder_123.config.spin_alignment = DalitzPlotDecomposition(reference_subsystem=1)\n", "builder_123.config.scalar_initial_state_mass = True\n", - "builder_123.config.stable_final_state_ids = [1, 2, 3]\n", + "builder_123.config.stable_final_state_ids = {1, 2, 3}\n", "dpd_model = builder_123.formulate()\n", "dpd_model.intensity.cleanup()" ] @@ -411,7 +363,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.11.8" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/helicity/symmetrization.ipynb b/docs/usage/helicity/symmetrization.ipynb index 0010ce44..94f8e5bc 100644 --- a/docs/usage/helicity/symmetrization.ipynb +++ b/docs/usage/helicity/symmetrization.ipynb @@ -1,62 +1,14 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Amplitude symmetrization\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Amplitude symmetrization" - ] - }, { "cell_type": "code", "execution_count": null, @@ -277,6 +229,7 @@ "source_hidden": true }, "tags": [ + "full-width", "hide-input" ] }, @@ -306,7 +259,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.12.11" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/interactive.ipynb b/docs/usage/interactive.ipynb index 49aaaffc..7a75fb0c 100644 --- a/docs/usage/interactive.ipynb +++ b/docs/usage/interactive.ipynb @@ -1,74 +1,37 @@ { "cells": [ { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], + "cell_type": "markdown", + "metadata": {}, "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" + "# Inspect model interactively\n", + "```{autolink-concat}\n", + "```" ] }, { "cell_type": "code", "execution_count": null, "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, "jupyter": { "source_hidden": true }, "tags": [ - "remove-cell" + "remove-input" ] }, "outputs": [], "source": [ - "import os\n", + "from IPython.display import display\n", "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "```{autolink-concat}\n", - "```" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Inspect model interactively" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "In this notebook, we illustrate how to interactively inspect a {class}`.HelicityModel`. The procedure should in fact work for any {class}`sympy.Expr `." + "STATIC_WEB_PAGE = True # {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "## Create amplitude model" + "In this notebook, we illustrate how to interactively inspect a {class}`.HelicityModel` using [Sympy Plotting Backends](https://sympy-plot-backends.readthedocs.io) and the {mod}`ampform.sympy.slider` module. The procedure should work for any {class}`sympy.Expr `." ] }, { @@ -81,7 +44,11 @@ { "cell_type": "code", "execution_count": null, - "metadata": {}, + "metadata": { + "jupyter": { + "source_hidden": true + } + }, "outputs": [], "source": [ "import qrules\n", @@ -99,12 +66,14 @@ " allowed_interaction_types=[\"strong\", \"EM\"],\n", " formalism=\"canonical-helicity\",\n", ")\n", - "model_builder = get_builder(reaction)\n", + "builder = get_builder(reaction)\n", + "builder.config.stable_final_state_ids = {0, 1, 2}\n", + "builder.config.scalar_initial_state_mass = True\n", "initial_state_particle = reaction.initial_state[-1]\n", - "model_builder.dynamics.assign(initial_state_particle, create_non_dynamic_with_ff)\n", + "builder.dynamics.assign(initial_state_particle, create_non_dynamic_with_ff)\n", "for name in reaction.get_intermediate_particles().names:\n", - " model_builder.dynamics.assign(name, create_relativistic_breit_wigner_with_ff)\n", - "model = model_builder.formulate()" + " builder.dynamics.assign(name, create_relativistic_breit_wigner_with_ff)\n", + "model = builder.formulate()" ] }, { @@ -126,254 +95,32 @@ "assert isinstance(amplitude, sp.Add)" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "Substitute some of the boring parameters with the provided {attr}`~.HelicityModel.parameter_defaults`:" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "substitutions = {\n", - " symbol: value\n", - " for symbol, value in model.parameter_defaults.items()\n", - " if not symbol.name.startswith(R\"\\Gamma_\") and not symbol.name.startswith(\"m_\")\n", - "}\n", - "amplitude = amplitude.doit().subs(substitutions)" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "## Lambdify" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "We now need to identify the {class}`~sympy.core.symbol.Symbol` over which the amplitude is to be plotted. The remaining symbols will be turned into slider parameters." - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "plot_symbol = sp.Symbol(\"m_12\", nonnegative=True)\n", - "slider_symbols = sorted(amplitude.free_symbols, key=lambda s: s.name)\n", - "slider_symbols.remove(plot_symbol)\n", - "slider_symbols" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "Next, {func}`~sympy.utilities.lambdify.lambdify` the expression:" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "np_amplitude = sp.lambdify(\n", - " (plot_symbol, *slider_symbols),\n", - " amplitude,\n", - " \"numpy\",\n", - ")" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "We also have to define some functions that formulate what we want to plot. A pure amplitude won't do, because we can only plot real values:" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - ":::{margin}\n", - "\n", - "See {doc}`mpl_interactions:examples/plot` and {doc}`mpl_interactions:examples/scatter` for why these functions are constructed this way.\n", - "\n", - ":::" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "import numpy as np\n", - "\n", - "\n", - "def intensity(plot_variable, **kwargs):\n", - " values = np_amplitude(plot_variable, **kwargs)\n", - " return np.abs(values) ** 2\n", - "\n", - "\n", - "def argand(**kwargs):\n", - " values = np_amplitude(plot_domain, **kwargs)\n", - " argand = np.array([values.real, values.imag])\n", - " return argand.T" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "## Prepare sliders" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - ":::{tip}\n", - "\n", - "This procedure has been extracted to the façade function {func}`symplot.prepare_sliders`.\n", - "\n", - ":::" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "We also need to define the domain over which to plot, as well sliders for each of the remaining symbols. The function {func}`.create_slider` helps creating an [ipywidgets slider](https://ipywidgets.readthedocs.io/en/stable/examples/Widget%20List.html) for each {class}`~sympy.core.symbol.Symbol`:" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - ":::{margin}\n", - "\n", - "{doc}`/usage/symplot` is not a published module, just a set of helper functions and classes provided for this documentation. Since the procedure sketched on this page is quite general, this module could be published as a separate interactive plotting package for {mod}`sympy` later on.\n", - "\n", - ":::" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "from symplot import create_slider\n", - "\n", - "plot_domain = np.linspace(0.2, 2.5, num=400)\n", - "sliders_mapping = {symbol.name: create_slider(symbol) for symbol in slider_symbols}" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "If the name of a {class}`~sympy.core.symbol.Symbol` is not a valid name for a Python variable (see {meth}`str.isidentifier`), {func}`~sympy.utilities.lambdify.lambdify` 'dummifies' it, so it can be used as argument for the lambdified function. Since {func}`~mpl_interactions.pyplot.interactive_plot` works with these (dummified) arguments as identifiers for the sliders, we need some mapping between the {class}`~sympy.core.symbol.Symbol` and their dummified name. This can be constructed with the help of {func}`inspect.signature`:" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "import inspect\n", - "\n", - "symbols_names = [s.name for s in (plot_symbol, *slider_symbols)]\n", - "arg_names = list(inspect.signature(np_amplitude).parameters)\n", - "arg_to_symbol = dict(zip(arg_names, symbols_names, strict=True))" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "The class {class}`.SliderKwargs` comes in as a handy manager for this {obj}`dict` of sliders:" - ] - }, { "cell_type": "code", "execution_count": null, "metadata": { + "jupyter": { + "source_hidden": true + }, "tags": [ + "hide-input", "full-width" ] }, "outputs": [], "source": [ - "from symplot import SliderKwargs\n", + "from IPython.display import Math\n", "\n", - "sliders = SliderKwargs(sliders_mapping, arg_to_symbol)\n", - "sliders" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "{class}`.SliderKwargs` also provides convenient methods for setting ranges and initial values for the sliders." - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "n_steps = 100\n", - "sliders.set_ranges({\n", - " \"m_{f_{0}(980)}\": (0.3, 1.8, n_steps),\n", - " \"m_{f_{0}(1500)}\": (0.3, 1.8, n_steps),\n", - " R\"\\Gamma_{f_{0}(980)}\": (0.01, 1, n_steps),\n", - " R\"\\Gamma_{f_{0}(1500)}\": (0.01, 1, n_steps),\n", - " \"m_1\": (0.01, 1, n_steps),\n", - " \"m_2\": (0.01, 1, n_steps),\n", - " \"phi_0\": (0, 2 * np.pi, 40),\n", - " \"theta_0\": (-np.pi, np.pi, 40),\n", - "})" + "from ampform.io import aslatex\n", + "\n", + "Math(aslatex(amplitude, terms_per_line=1))" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "The method {meth}`~.SliderKwargs.set_values` is designed in particular for {attr}`~.HelicityModel.parameter_defaults`, but also works well with both argument names (that may have been dummified) and the original symbol names:" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "import qrules\n", - "\n", - "pdg = qrules.load_pdg()\n", - "sliders.set_values(model.parameter_defaults)\n", - "sliders.set_values(\n", - " { # symbol names\n", - " \"phi_0\": 0,\n", - " \"theta_0\": np.pi / 2,\n", - " },\n", - " # argument names\n", - " m_1=pdg[\"pi0\"].mass,\n", - " m_2=pdg[\"pi0\"].mass,\n", - ")" + "Substitute some of the boring parameters with the provided {attr}`~.HelicityModel.parameter_defaults`:" ] }, { @@ -383,63 +130,72 @@ "jupyter": { "source_hidden": true }, + "mystnb": { + "code_prompt_show": "Substitute certain parameters" + }, "tags": [ - "remove-cell" + "hide-input" ] }, "outputs": [], "source": [ - "if STATIC_WEB_PAGE:\n", - " # Concatenate flipped domain for reverse animation\n", - " domain = np.linspace(0.8, 2.2, 100)\n", - " domain = np.concatenate((domain, np.flip(domain[1:])))\n", - " sliders._sliders[\"m_{f_{0}(980)}\"] = domain" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "## Interactive Argand plot" + "amplitude = amplitude.doit().subs({\n", + " symbol: value\n", + " for symbol, value in model.parameter_defaults.items()\n", + " if not str(symbol).startswith((R\"\\Gamma_\", \"m_{\", \"m_1\", \"m_2\"))\n", + "})\n", + "amplitude = amplitude.subs({\n", + " symbol: 0\n", + " for symbol in amplitude.free_symbols\n", + " if str(symbol).startswith((\"phi\", \"theta\"))\n", + "})\n", + "amplitude.free_symbols" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "Finally, we can use {doc}`mpl-interactions ` to plot the functions defined above with regard to the parameter values:" + "The {mod}`ampform.sympy.slider` module contains some handy functions for creating {mod}`ipywidgets` sliders from SymPy symbols. Here is an example that will be useful when using the {mod}`spb` module with interactive parameter sliders." ] }, { - "cell_type": "markdown", - "metadata": {}, + "cell_type": "code", + "execution_count": null, + "metadata": { + "mystnb": { + "code_prompt_show": "Create dictionary of sliders" + } + }, + "outputs": [], "source": [ - ":::{margin}\n", + "from ampform.sympy.slider import create_slider\n", "\n", - "Interactive {mod}`~matplotlib.widgets` do not render well on web pages, so run this notebook in on Binder or locally in Jupyter Lab to see the full potential of {doc}`mpl-interactions `!\n", - "\n", - ":::" + "sliders = {\n", + " s: create_slider(s, value=v)\n", + " for s, v in model.parameter_defaults.items()\n", + " if s in amplitude.free_symbols\n", + "}\n", + "for symbol, slider in sliders.items():\n", + " if str(symbol).startswith(\"m\"):\n", + " slider.max = 2.3\n", + " if str(symbol).startswith(R\"\\Gamma\"):\n", + " slider.max = 1\n", + " slider.step = 0.01\n", + "display(*sliders.values())" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "```{autolink-skip}\n", - "```" + "Finally, we can can use the {mod}`spb` module to create a few interactive plots!" ] }, { "cell_type": "code", "execution_count": null, - "metadata": { - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, + "metadata": {}, "outputs": [], "source": [ "%matplotlib widget" @@ -452,62 +208,69 @@ "jupyter": { "source_hidden": true }, + "mystnb": { + "code_prompt_show": "Create widget with Sympy Plotting Backends" + }, "tags": [ - "hide-input" + "remove-output", + "hide-input", + "scroll-input" ] }, "outputs": [], "source": [ - "%config InlineBackend.figure_formats = ['svg']\n", - "\n", "import matplotlib.pyplot as plt\n", - "import mpl_interactions.ipyplot as iplt\n", + "import spb\n", "\n", - "# Create figure\n", - "fig, axes = plt.subplots(1, 2, figsize=0.9 * np.array((8, 3.8)), tight_layout=True)\n", + "t = sp.Symbol(\"t\")\n", + "m1, m2, m12 = sp.symbols(\"m_1 m_2 m_12\", nonnegative=True)\n", + "\n", + "line_kwargs = dict(\n", + " expr_y=t,\n", + " params=sliders,\n", + " n=2,\n", + " range_p=(t, 0, 10),\n", + " rendering_kw=dict(ls=\"dotted\"),\n", + " use_cm=False,\n", + " name=\"threshold\",\n", + ")\n", + "xlim = (0.2, 2.5)\n", + "plt.rc(\"font\", size=14)\n", + "fig, axes = plt.subplots(figsize=(12, 4), ncols=2, gridspec_kw={\"width_ratios\": [1, 2]})\n", + "ax1, ax2 = axes.ravel()\n", + "fig.subplots_adjust(bottom=0.15, left=0.1, right=0.98, top=0.95)\n", "fig.canvas.toolbar_visible = False\n", "fig.canvas.header_visible = False\n", "fig.canvas.footer_visible = False\n", - "fig.suptitle(R\"$J/\\psi \\to \\gamma f_0, f_0 \\to \\pi^0\\pi^0$\")\n", - "ax_intensity, ax_argand = axes\n", - "m_label = R\"$m_{\\pi^0\\pi^0}$ (GeV)\"\n", - "ax_intensity.set_xlabel(m_label)\n", - "ax_intensity.set_ylabel(\"$I = |A|^2$\")\n", - "ax_argand.set_xlabel(\"Re($A$)\")\n", - "ax_argand.set_ylabel(\"Im($A$)\")\n", - "\n", - "# Fill plots\n", - "controls = iplt.plot(\n", - " plot_domain,\n", - " intensity,\n", - " **sliders,\n", - " slider_formats=dict.fromkeys(arg_names, \"{:.3f}\"),\n", - " ylim=\"auto\",\n", - " ax=ax_intensity,\n", + "spb.graphics(\n", + " spb.line_parametric_2d(\n", + " expr_x=sp.re(amplitude),\n", + " expr_y=sp.im(amplitude),\n", + " params=sliders,\n", + " range_p=(m12, 0.01, 3),\n", + " use_cm=False,\n", + " ),\n", + " aspect=\"equal\",\n", + " ax=ax1,\n", + " ncols=3,\n", + " xlabel=R\"$\\text{Re}\\,A$\",\n", + " ylabel=R\"$\\text{Im}\\,A$\",\n", ")\n", - "iplt.scatter(\n", - " argand,\n", - " controls=controls,\n", - " xlim=\"auto\",\n", - " ylim=\"auto\",\n", - " parametric=True,\n", - " c=plot_domain,\n", - " s=1,\n", - " ax=ax_argand,\n", + "exprs = [m1 + m2, *(s for s in sliders if str(s).startswith(\"m_{\"))]\n", + "UI = spb.graphics(\n", + " *(\n", + " spb.line_parametric_2d(x, **line_kwargs, label=f\"${sp.latex(x)}$\")\n", + " for x in exprs\n", + " ),\n", + " spb.line_abs_arg_colored(amplitude, (m12, *xlim), params=sliders, label=\"A\"),\n", + " ax=ax2,\n", + " ncols=3,\n", + " xlabel=R\"$m_{\\pi^0\\pi^0}$\",\n", + " ylabel=\"$|A|$\",\n", + " xlim=xlim,\n", + " ylim=(0, 2),\n", ")\n", - "plt.colorbar(label=m_label, ax=ax_argand, aspect=30, pad=0.01)\n", - "plt.winter()" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - ":::{margin}\n", - "\n", - "This figure is an animation over **just one of the parameters**. Run the notebook itself to play around with all parameters!\n", - "\n", - ":::" + "UI" ] }, { @@ -517,31 +280,69 @@ "jupyter": { "source_hidden": true }, + "mystnb": { + "code_prompt_show": "Export widget as GIF" + }, "tags": [ - "remove-input" + "hide-input", + "scroll-input", + "full-width" ] }, "outputs": [], "source": [ - "# Export for Read the Docs\n", "if STATIC_WEB_PAGE:\n", " from IPython.display import Image, display\n", + " from matplotlib.animation import FuncAnimation, PillowWriter\n", + " from tqdm.auto import tqdm\n", + "\n", + " def frame_generator():\n", + " while True:\n", + " if not forward and animated_slider.value <= start:\n", + " return\n", + " yield\n", + "\n", + " def animate(_):\n", + " global forward\n", + " if animated_slider.value >= end:\n", + " forward = False\n", + " if forward:\n", + " animated_slider.value += step * animated_slider.step\n", + " else:\n", + " animated_slider.value -= step * animated_slider.step\n", + " fig.canvas.draw_idle()\n", + " pbar.set_postfix_str(f\"value={animated_slider.value:g}\")\n", + " pbar.update()\n", "\n", + " animated_slider, *_ = sliders.values()\n", + " start = max(1.0, animated_slider.min)\n", + " end = min(2.0, animated_slider.max)\n", + " step = 3\n", + "\n", + " forward = True\n", + " animated_slider.value = start\n", + " pbar = tqdm(desc=\"Exporting animation\", leave=False)\n", " output_path = \"animation.gif\"\n", - " symbol_to_arg = dict(zip(symbols_names, arg_names, strict=True))\n", - " arg_name = symbol_to_arg[\"m_{f_{0}(980)}\"]\n", - " controls.save_animation(output_path, fig, arg_name, fps=25)\n", + " animation = FuncAnimation(\n", + " fig,\n", + " animate,\n", + " cache_frame_data=False,\n", + " frames=frame_generator(),\n", + " repeat=False,\n", + " )\n", + " animation.save(output_path, writer=PillowWriter(fps=10))\n", + " pbar.close()\n", " with open(output_path, \"rb\") as f:\n", - " display(Image(data=f.read(), format=\"png\"))" + " display(UI.children[0], Image(data=f.read(), format=\"png\"))" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - ":::{tip}\n", + ":::{margin}\n", "\n", - "See {doc}`/usage/dynamics/k-matrix` for why $\\boldsymbol{K}$-matrix dynamics are better than simple Breit-Wigners when resonances are close to each other.\n", + "This figure is an animation over **just one of the parameters**. Run the notebook itself to play around with all parameters!\n", "\n", ":::" ] @@ -550,10 +351,11 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "```{toctree}\n", - ":hidden:\n", - "symplot\n", - "```" + ":::{tip}\n", + "\n", + "See {doc}`/usage/dynamics/k-matrix` for why $\\boldsymbol{K}$-matrix dynamics are better than simple Breit-Wigners when resonances are close to each other.\n", + "\n", + ":::" ] } ], @@ -567,8 +369,16 @@ "name": "python3" }, "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", "name": "python", - "version": "3.8.17" + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/kinematics.ipynb b/docs/usage/kinematics.ipynb index 4ee8eb8a..f6f8b673 100644 --- a/docs/usage/kinematics.ipynb +++ b/docs/usage/kinematics.ipynb @@ -1,62 +1,14 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Kinematics\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Kinematics" - ] - }, { "cell_type": "code", "execution_count": null, @@ -407,7 +359,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.11.8" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/modify.ipynb b/docs/usage/modify.ipynb index e8efca21..e9f38a28 100644 --- a/docs/usage/modify.ipynb +++ b/docs/usage/modify.ipynb @@ -1,62 +1,14 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# Modify amplitude model\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# Modify amplitude model" - ] - }, { "cell_type": "code", "execution_count": null, @@ -198,7 +150,7 @@ "outputs": [], "source": [ "original_coefficients = [\n", - " par for par in original_model.parameter_defaults if par.name.startswith(\"C\")\n", + " par for par in original_model.parameter_defaults if str(par).startswith(\"C\")\n", "]\n", "original_coefficients" ] @@ -241,9 +193,10 @@ "new_components = dict(original_model.components) # copy!\n", "\n", "for coefficient in original_coefficients:\n", - " decay_description = coefficient.name[3:-1]\n", + " coefficient_name = str(coefficient)\n", + " decay_description = coefficient_name[3:-1]\n", " magnitude = sp.Symbol( # coefficient with same name, but real, not complex\n", - " coefficient.name,\n", + " coefficient_name,\n", " nonnegative=True,\n", " )\n", " phase = sp.Symbol(\n", @@ -381,7 +334,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.11.8" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/docs/usage/symplot.ipynb b/docs/usage/symplot.ipynb deleted file mode 100644 index 47783197..00000000 --- a/docs/usage/symplot.ipynb +++ /dev/null @@ -1,309 +0,0 @@ -{ - "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "```{autolink-concat}\n", - "```" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# symplot" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "```{eval-rst}\n", - ".. automodule:: symplot\n", - "```" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "## Examples" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "The following examples show how to work with {func}`.prepare_sliders` and the resulting {class}`.SliderKwargs`. For more explanation about what happens behind the scenes, see {doc}`interactive`." - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "### Exponential wave" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "Construct a mathematical expression with {mod}`sympy`:" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "import sympy as sp\n", - "\n", - "n = sp.Symbol(\"n\", integer=True)\n", - "x, a = sp.symbols(\"x, a\")\n", - "expression = sp.sin(n * x) * sp.exp(-a * x)\n", - "expression" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "Create sliders with {func}`.prepare_sliders`, set their ranges and (optionally) provide some initial values:" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "from symplot import prepare_sliders\n", - "\n", - "np_expression, sliders = prepare_sliders(expression, plot_symbol=x)\n", - "sliders.set_ranges(\n", - " n=(0, 10),\n", - " a=(-1, 1, 200),\n", - ")\n", - "sliders.set_values(n=6, a=0.3)" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "if STATIC_WEB_PAGE:\n", - " import numpy as np\n", - "\n", - " # Concatenate flipped domain for reverse animation\n", - " domain = np.linspace(-1, 1, 50)\n", - " domain = np.concatenate((domain, np.flip(domain[1:])))\n", - " sliders._sliders[\"a\"] = domain" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "Now use {doc}`mpl-interactions ` to plot the {doc}`lambdified ` expression. Note how the {class}`SliderKwargs` are unpacked as keyword arguments:\n", - "\n", - "```{autolink-skip}\n", - "```" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "%matplotlib widget" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "tags": [ - "remove-output" - ] - }, - "outputs": [], - "source": [ - "%config InlineBackend.figure_formats = ['svg']\n", - "\n", - "import matplotlib.pyplot as plt\n", - "import mpl_interactions.ipyplot as iplt\n", - "import numpy as np\n", - "\n", - "plot_domain = np.linspace(0, 10, 1_000)\n", - "fig, ax = plt.subplots(figsize=(7, 4))\n", - "controls = iplt.plot(\n", - " plot_domain,\n", - " np_expression,\n", - " **sliders,\n", - " ylim=\"auto\",\n", - ")\n", - "ax.set_xlabel(\"$x$\")\n", - "ax.set_ylabel(f\"${sp.latex(expression)}$\");" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "{{ run_interactive }}" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-input" - ] - }, - "outputs": [], - "source": [ - "# Export for Read the Docs\n", - "if STATIC_WEB_PAGE:\n", - " from IPython.display import Image, display\n", - "\n", - " output_path = \"exponential-wave.gif\"\n", - " ax.set_yticks([])\n", - " iplt.title(\"$n = {n}, a = {a:.2f}$\", controls=controls)\n", - " controls.save_animation(output_path, fig, \"a\", fps=25)\n", - " with open(output_path, \"rb\") as f:\n", - " display(Image(data=f.read(), format=\"png\"))" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "### Range slider" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "See {doc}`mpl_interactions:examples/range-sliders`." - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [ - "np_expression, sliders = prepare_sliders(expression, plot_symbol=x)\n", - "sliders.set_values(n=6, a=0.3)\n", - "sliders.set_ranges(\n", - " n=(0, 10),\n", - " a=(-1, 1, 200),\n", - ")\n", - "\n", - "\n", - "def x_domain(x_range, **kwargs):\n", - " min_, max_ = x_range\n", - " return np.linspace(min_, max_, 1_000)\n", - "\n", - "\n", - "def f(x, **kwargs):\n", - " del kwargs[\"x_range\"]\n", - " return np_expression(x, **kwargs)\n", - "\n", - "\n", - "fig, ax = plt.subplots()\n", - "controls = iplt.plot(\n", - " x_domain,\n", - " f,\n", - " x_range=(\"r\", 0, 10),\n", - " **sliders,\n", - " xlim=\"auto\",\n", - " ylim=\"auto\",\n", - ")" - ] - } - ], - "metadata": { - "colab": { - "toc_visible": true - }, - "kernelspec": { - "display_name": "Python 3 (ipykernel)", - "language": "python", - "name": "python3" - }, - "language_info": { - "codemirror_mode": { - "name": "ipython", - "version": 3 - }, - "file_extension": ".py", - "mimetype": "text/x-python", - "name": "python", - "nbconvert_exporter": "python", - "pygments_lexer": "ipython3", - "version": "3.8.17" - } - }, - "nbformat": 4, - "nbformat_minor": 4 -} diff --git a/docs/usage/sympy.ipynb b/docs/usage/sympy.ipynb index 75d28663..56f14ee6 100644 --- a/docs/usage/sympy.ipynb +++ b/docs/usage/sympy.ipynb @@ -1,62 +1,14 @@ { "cells": [ - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell", - "skip-execution" - ] - }, - "outputs": [], - "source": [ - "# WARNING: advised to install a specific version, e.g. ampform==0.1.2\n", - "%pip install -q ampform[doc,viz] IPython" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": { - "hideCode": true, - "hideOutput": true, - "hidePrompt": true, - "jupyter": { - "source_hidden": true - }, - "tags": [ - "remove-cell" - ] - }, - "outputs": [], - "source": [ - "import os\n", - "\n", - "STATIC_WEB_PAGE = {\"EXECUTE_NB\", \"READTHEDOCS\"}.intersection(os.environ)" - ] - }, { "cell_type": "markdown", "metadata": {}, "source": [ + "# SymPy helper functions\n", "```{autolink-concat}\n", "```" ] }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "# SymPy helper functions" - ] - }, { "cell_type": "markdown", "metadata": {}, @@ -187,8 +139,6 @@ "metadata": {}, "outputs": [], "source": [ - "from __future__ import annotations\n", - "\n", "from typing import Any, ClassVar\n", "\n", "\n", @@ -397,10 +347,10 @@ }, "outputs": [], "source": [ - "%config InlineBackend.figure_formats = ['svg']\n", - "\n", "import matplotlib.pyplot as plt\n", + "from matplotlib_inline.backend_inline import set_matplotlib_formats\n", "\n", + "set_matplotlib_formats(\"svg\")\n", "x_area = np.linspace(a_val, b_val, num=100)\n", "x_line = np.linspace(0, 4, num=100)\n", "\n", @@ -587,7 +537,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.12.8" + "version": "3.13.12" } }, "nbformat": 4, diff --git a/pyproject.toml b/pyproject.toml index 55acb071..7496a6fe 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -63,9 +63,7 @@ Tracker = "https://github.com/ComPWA/ampform/issues" [dependency-groups] dev = [ - "poethepoet", "ruff", - "sphinx-autobuild", {include-group = "doc"}, {include-group = "jupyter"}, {include-group = "style"}, @@ -88,33 +86,31 @@ doc = [ {include-group = "notebooks"}, ] jupyter = [ + "jupyter-ruff", "jupyterlab", - "jupyterlab-code-formatter", "jupyterlab-git", "jupyterlab-lsp", "jupyterlab-myst", "jupyterlab-quickopen", "python-lsp-ruff", - "python-lsp-server[rope]", + "python-lsp-server", ] notebooks = [ "ampform[scipy,viz]", "black", "ipympl", - "matplotlib <3.9.0", # https://github.com/ComPWA/ampform/issues/279 "matplotlib", - "mpl-interactions", "numpy", "rich", + "sympy-plot-backends", ] style = [ - "mypy >=0.730", + "ty", {include-group = "types"}, ] test = [ "ampform[scipy]", - "ipywidgets", # symplot - "nbmake", + "ipywidgets", "numpy", "pytest", "pytest-benchmark", @@ -129,6 +125,7 @@ types = [ "pytest", "pytest-benchmark", "sphinx-api-relink >=0.0.3", + {include-group = "notebooks"}, ] [tool.setuptools] @@ -137,7 +134,6 @@ package-dir = {"" = "src"} [tool.setuptools.package-data] ampform = ["py.typed"] -symplot = ["py.typed"] [tool.setuptools.packages.find] namespaces = false @@ -162,47 +158,10 @@ omit = [ ] source = ["src"] -[tool.mypy] -exclude = "_build" -show_error_codes = true -warn_unused_configs = true - -[[tool.mypy.overrides]] -ignore_missing_imports = true -module = ["sympy.*"] - -[[tool.mypy.overrides]] -ignore_missing_imports = true -module = ["graphviz.*"] - -[[tool.mypy.overrides]] -ignore_missing_imports = true -module = ["numpy.lib.index_tricks.*"] - -[[tool.mypy.overrides]] -ignore_missing_imports = true -module = ["pytest_benchmark.*"] - -[[tool.mypy.overrides]] -ignore_missing_imports = true -module = ["ipywidgets.*"] - -[[tool.mypy.overrides]] -ignore_missing_imports = true -module = ["scipy.*"] - -[[tool.mypy.overrides]] -check_untyped_defs = true -disallow_incomplete_defs = false -disallow_untyped_defs = false -module = ["benchmarks.*", "tests.*"] - -[[tool.mypy.overrides]] -ignore_errors = true -module = ["typings.*"] - -[tool.poe] -executor.type = "uv" +[tool.poe.executor] +isolated = true +no-group = "dev" +type = "uv" [tool.poe.tasks.all] help = "Run all continuous integration (CI) tasks locally" @@ -218,25 +177,26 @@ sequence = [ [tool.poe.tasks.benchmark] cmd = """ -uv run --group test --isolated --no-dev \ - pytest benchmarks \ - --benchmark-autosave \ - --durations=0 \ - -k benchmark +pytest benchmarks \ + --benchmark-autosave \ + --benchmark-json benchmarks/output.json \ + --durations=0 \ + -k benchmark """ +executor = {group = "test"} help = "Run benchmark tests and visualize performance" [tool.poe.tasks.cov] cmd = """ -uv run --group test --isolated --no-dev \ - pytest \ - --cov=ampform \ - --cov-fail-under=75 \ - --cov-report=html \ - --cov-report=xml \ - --numprocesses=auto \ - ${paths} +pytest \ + --cov=ampform \ + --cov-fail-under=75 \ + --cov-report=html \ + --cov-report=xml \ + --numprocesses=auto \ + ${paths} """ +executor = {group = "test"} help = "Compute how much of the source code is covered by tests" [[tool.poe.tasks.cov.args]] @@ -256,6 +216,7 @@ sphinx-build \ docs/_build/html/ """ env = {PYTHONWARNINGS = ""} +executor = {group = "doc"} help = "Build documentation and API" [tool.poe.tasks.doclive] @@ -283,6 +244,7 @@ sphinx-autobuild \ docs/ \ docs/_build/html/ """ +executor = {group = "doc", with = "sphinx-autobuild"} help = "Set up a server to directly preview changes to the HTML pages" [tool.poe.tasks.docnb] @@ -303,29 +265,36 @@ sequence = ["doclive"] [tool.poe.tasks.lab] args = [{name = "paths", default = "", positional = true}] cmd = "jupyter lab ${paths}" -help = "Run Jupyter Lab" +executor = {group = ["jupyter", "notebooks"]} +help = "Launch Jupyter Lab" [tool.poe.tasks.linkcheck] cmd = """ sphinx-build \ --builder=linkcheck \ + --fail-on-warning \ --show-traceback \ docs/ \ docs/_build/linkcheck/ """ env = {PYTHONWARNINGS = ""} +executor = {group = "doc"} help = "Check external links in the documentation (requires internet connection)" [tool.poe.tasks.nb] -cmd = "pytest --nbmake --nbmake-timeout=0 docs" +args = [{name = "paths", default = "docs", multiple = true, positional = true}] +cmd = "pytest --nbmake --nbmake-timeout=0 ${paths}" +executor = {group = "notebooks", with = "nbmake"} help = "Run all notebooks" [tool.poe.tasks.style] -cmd = "uv run --group style --isolated --no-dev pre-commit run --all-files" +cmd = "pre-commit run --all-files" +executor = {extra = "scipy", group = "style"} help = "Perform all linting, formatting, and spelling checks" [tool.poe.tasks.test] -cmd = "uv run --group test --isolated --no-dev pytest --numprocesses=auto ${paths}" +cmd = "pytest -m 'slow or not slow' --numprocesses=auto ${paths}" +executor = {group = "test"} help = "Run all unit tests" [[tool.poe.tasks.test.args]] @@ -337,68 +306,40 @@ positional = true [tool.poe.tasks.test-all] help = "Run all tests on each supported Python version" sequence = [ - {ref = "test-py 3.10"}, - {ref = "test-py 3.11"}, - {ref = "test-py 3.12"}, - {ref = "test-py 3.13"}, - {ref = "test-py 3.14"}, + {ref = "test-py310 ${paths}"}, + {ref = "test-py311 ${paths}"}, + {ref = "test-py312 ${paths}"}, + {ref = "test-py313 ${paths}"}, + {ref = "test-py314 ${paths}"}, ] -[tool.poe.tasks.test-py] -cmd = """ -uv run \ - --group=test \ - --isolated \ - --no-dev \ - --python=${version} \ - pytest \ - -m 'slow or not slow' \ - --numprocesses=auto -""" -help = "Run all tests on a specific Python version" - -[[tool.poe.tasks.test-py.args]] -default = "3.13" -help = "Selected Python version" -name = "version" +[[tool.poe.tasks.test-all.args]] +default = "" +multiple = true +name = "paths" positional = true -[tool.pyright] -reportArgumentType = false -reportAssignmentType = false -reportAttributeAccessIssue = false -reportCallIssue = false -reportGeneralTypeIssues = false -reportIncompatibleMethodOverride = false -reportInconsistentOverload = false -reportMissingParameterType = false -reportMissingTypeArgument = false -reportMissingTypeStubs = false -reportOperatorIssue = false -reportOverlappingOverload = false -reportPrivateImportUsage = false -reportPrivateUsage = false -reportReturnType = false -reportUnboundVariable = false -reportUnknownArgumentType = false -reportUnknownLambdaType = false -reportUnknownMemberType = false -reportUnknownParameterType = false -reportUnknownVariableType = false -reportUnnecessaryComparison = false -reportUnnecessaryContains = false -reportUnnecessaryIsInstance = false -reportUntypedClassDecorator = false -reportUntypedFunctionDecorator = false -reportUnusedClass = true -reportUnusedFunction = true -reportUnusedImport = true -reportUnusedVariable = true -typeCheckingMode = "strict" -venv = ".venv" -venvPath = "." - -[tool.pytest.ini_options] +[tool.poe.tasks.test-py310] +env = {UV_PYTHON = "3.10"} +ref = "test" + +[tool.poe.tasks.test-py311] +env = {UV_PYTHON = "3.11"} +ref = "test" + +[tool.poe.tasks.test-py312] +env = {UV_PYTHON = "3.12"} +ref = "test" + +[tool.poe.tasks.test-py313] +env = {UV_PYTHON = "3.13"} +ref = "test" + +[tool.poe.tasks.test-py314] +env = {UV_PYTHON = "3.14"} +ref = "test" + +[tool.pytest] addopts = [ "--color=yes", "--doctest-continue-on-failure", @@ -406,13 +347,14 @@ addopts = [ "--durations=3", "--ignore=docs/abbreviate_signature.py", "--ignore=docs/conf.py", + "--import-mode=importlib", "-m not slow", "-rS", ] filterwarnings = [ "error", "ignore: The `hash` argument is deprecated in favor of `unsafe_hash` and will be removed in or after August 2025.:DeprecationWarning", - "ignore:.*:pytest_benchmark.logger.PytestBenchmarkWarning", + "ignore:.*Benchmarks are automatically disabled.*", "ignore:.*invalid value encountered in sqrt.*:RuntimeWarning", "ignore:.*is deprecated and slated for removal in Python 3.14:DeprecationWarning", "ignore:.*the @ampform.sympy.unevaluated_expression decorator instead( with commutative=True)?:DeprecationWarning", @@ -424,6 +366,7 @@ filterwarnings = [ 'ignore:Widget\..* is deprecated\.:DeprecationWarning', ] markers = ["slow: marks tests as slow (select with '-m slow')"] +minversion = "9.0" norecursedirs = [ ".ipynb_checkpoints", ".virtual_documents", @@ -450,6 +393,7 @@ docstring-code-format = true line-ending = "lf" [tool.ruff.lint] +allowed-confusables = ["–"] ignore = [ "ANN", "ARG00", @@ -477,6 +421,7 @@ ignore = [ "PLW2901", "PT001", "PTH", + "RUF067", "SIM108", ] select = ["ALL"] @@ -502,6 +447,7 @@ ignore-names = [ ] [tool.ruff.lint.isort] +known-first-party = ["ampform"] known-third-party = ["sympy"] split-on-trailing-comma = false @@ -532,12 +478,10 @@ split-on-trailing-comma = false ] "**/docs/usage/dynamics.ipynb" = ["FURB118", "RUF027"] "**/docs/usage/dynamics/riemann-sheets.ipynb" = ["E741", "RUF027"] -"**/docs/usage/symplot.ipynb" = ["RUF027"] "**/docs/usage/sympy.ipynb" = ["E731"] "benchmarks/*" = [ "D", "INP001", - "PGH001", "PLC2701", "PLR2004", "PLR6301", @@ -569,7 +513,6 @@ split-on-trailing-comma = false "C408", "D", "INP001", - "PGH001", "PLC2701", "PLR0914", "PLR0917", @@ -599,3 +542,49 @@ sort_first = [ ] spaces_indent_inline_array = 4 trailing_comma_inline_array = true + +[[tool.ty.overrides]] +include = ["docs/**"] + +[tool.ty.overrides.rules] +possibly-unresolved-reference = "ignore" + +[[tool.ty.overrides]] +include = [ + "docs/usage/dynamics.ipynb", + "docs/usage/dynamics/analytic-continuation.ipynb", + "docs/usage/helicity/formalism.ipynb", + "docs/usage/interactive.ipynb", +] +rules.unresolved-attribute = "ignore" + +[[tool.ty.overrides]] +include = [ + "src/ampform/sympy/**", + "tests/sympy/**", +] +rules.unresolved-attribute = "ignore" + +[[tool.ty.overrides]] +include = ["docs/usage/interactive.ipynb"] +rules.too-many-positional-arguments = "ignore" + +[[tool.ty.overrides]] +include = ["tests/external/test_sympy.py"] +rules.call-non-callable = "ignore" + +[tool.ty.rules] +division-by-zero = "warn" +invalid-argument-type = "ignore" +possibly-missing-import = "warn" +possibly-unresolved-reference = "warn" +unknown-argument = "ignore" +unsupported-operator = "ignore" + +[tool.ty.terminal] +error-on-warning = true + +[tool.uv.sources] +qrules = {git = "https://github.com/ComPWA/qrules", rev = "75bc682a56ca07b1eadeafeca4fb1676de7281b4"} +sphinx-api-relink = {git = "https://github.com/ComPWA/sphinx-api-relink", rev = "5e18cb0981eb31680926bdb6511078f4308f38e0"} +sphinx-pybtex-etal-style = {git = "https://github.com/ComPWA/sphinx-pybtex-etal-style", rev = "763f4d99a68a1789689c5a4f60ee86498f92ed31"} diff --git a/src/ampform/dynamics/__init__.py b/src/ampform/dynamics/__init__.py index 39a6d678..ccef99ed 100644 --- a/src/ampform/dynamics/__init__.py +++ b/src/ampform/dynamics/__init__.py @@ -10,7 +10,7 @@ import sympy as sp -# pyright: reportUnusedImport=false +from ampform.dynamics import phasespace as phasespace from ampform.dynamics.form_factor import ( BlattWeisskopfSquared, # noqa: F401 FormFactor, @@ -39,7 +39,7 @@ class EnergyDependentWidth(sp.Expr): r"""Mass-dependent width, coupled to the pole position of the resonance. See Equation (50.28) in :pdg-review:`2021; Resonances; p.9` and - :cite:`ParticleDataGroup:2020ssz`, equation (6). Default value for + :cite:`ParticleDataGroup:2012pjm`, equation (6). Default value for :code:`phsp_factor` is `.PhaseSpaceFactor`. Note that the `.FormFactor` of AmpForm is normalized in the sense that equal powers @@ -56,17 +56,18 @@ class EnergyDependentWidth(sp.Expr): m_b: Any angular_momentum: Any meson_radius: Any - phsp_factor: PhaseSpaceFactorProtocol = argument( # type:ignore[assignment] + phsp_factor: PhaseSpaceFactorProtocol = argument( default=PhaseSpaceFactor, sympify=False ) name: str | None = argument(default=None, sympify=False) def evaluate(self) -> sp.Expr: - s, m0, width0, m1, m2, angular_momentum, meson_radius = self.args + m0: sp.Expr + s, m0, width0, m1, m2, angular_momentum, meson_radius = self.args # ty:ignore[invalid-assignment] ff = FormFactor(s, m1, m2, angular_momentum, meson_radius) - ff0 = FormFactor(m0**2, m1, m2, angular_momentum, meson_radius) # type: ignore[operator] + ff0 = FormFactor(m0**2, m1, m2, angular_momentum, meson_radius) rho = self.phsp_factor(s, m1, m2) - rho0 = self.phsp_factor(m0**2, m1, m2) # type: ignore[operator] + rho0 = self.phsp_factor(m0**2, m1, m2) return width0 * (ff / ff0) ** 2 * (rho / rho0) def _latex_repr_(self, printer: LatexPrinter, *args) -> str: @@ -81,7 +82,7 @@ def relativistic_breit_wigner(s, mass0, gamma0) -> sp.Expr: """Relativistic Breit-Wigner lineshape. See :ref:`usage/dynamics:_Without_ form factor` and - :cite:`ParticleDataGroup:2020ssz`. + :cite:`ParticleDataGroup:2012pjm`. """ return gamma0 * mass0 / (mass0**2 - s - gamma0 * mass0 * sp.I) @@ -94,7 +95,7 @@ def relativistic_breit_wigner_with_ff( # noqa: PLR0917 m_b, angular_momentum, meson_radius, - phsp_factor: PhaseSpaceFactorProtocol = PhaseSpaceFactor, # type:ignore[assignment] + phsp_factor: PhaseSpaceFactorProtocol = PhaseSpaceFactor, ) -> sp.Expr: """Relativistic Breit-Wigner with `.FormFactor`. diff --git a/src/ampform/dynamics/builder.py b/src/ampform/dynamics/builder.py index 59ba8fcf..e91c1464 100644 --- a/src/ampform/dynamics/builder.py +++ b/src/ampform/dynamics/builder.py @@ -117,7 +117,7 @@ def __init__( phsp_factor: PhaseSpaceFactorProtocol | None = None, ) -> None: if phsp_factor is None: - phsp_factor = PhaseSpaceFactor # type:ignore[arg-type,assignment] + phsp_factor = PhaseSpaceFactor self.phsp_factor = phsp_factor self.energy_dependent_width = energy_dependent_width self.form_factor = form_factor @@ -183,7 +183,7 @@ def __energy_dependent_breit_wigner( m_b=m_b, angular_momentum=angular_momentum, meson_radius=meson_radius, - phsp_factor=self.phsp_factor, # type:ignore[arg-type] + phsp_factor=self.phsp_factor, ) breit_wigner_expr = (res_mass * res_width) / ( res_mass**2 - s - mass_dependent_width * res_mass * sp.I @@ -214,7 +214,7 @@ def __create_form_factor( parameter_defaults = { meson_radius: 1, } - return form_factor, parameter_defaults # type: ignore[return-value] + return form_factor, parameter_defaults @staticmethod def __create_symbols( @@ -239,7 +239,7 @@ def __create_symbols( create_relativistic_breit_wigner_with_ff = RelativisticBreitWignerBuilder( energy_dependent_width=True, form_factor=True, - phsp_factor=PhaseSpaceFactor, # type:ignore[arg-type] + phsp_factor=PhaseSpaceFactor, ).__call__ """Create a `.relativistic_breit_wigner_with_ff` for a two-body decay. @@ -250,7 +250,7 @@ def __create_symbols( create_analytic_breit_wigner = RelativisticBreitWignerBuilder( energy_dependent_width=True, form_factor=True, - phsp_factor=EqualMassPhaseSpaceFactor, # type:ignore[arg-type] + phsp_factor=EqualMassPhaseSpaceFactor, ).__call__ """Create a `.relativistic_breit_wigner_with_ff` with analytic continuation. diff --git a/src/ampform/dynamics/form_factor.py b/src/ampform/dynamics/form_factor.py index 296fbbe4..0458cd1c 100644 --- a/src/ampform/dynamics/form_factor.py +++ b/src/ampform/dynamics/form_factor.py @@ -115,12 +115,12 @@ def evaluate(self) -> sp.Expr: l, z = self.args # noqa: E741 k = sp.Dummy("k", integer=True, nonnegative=True) return ( - (-sp.I) ** (1 + l) # type:ignore[operator] + (-sp.I) ** (1 + l) * (sp.exp(z * sp.I) / z) * _SymbolicSum( sp.factorial(l + k) / (sp.factorial(l - k) * sp.factorial(k)) - * (sp.I / (2 * z)) ** k, # type:ignore[operator] + * (sp.I / (2 * z)) ** k, (k, 0, l), ) ) diff --git a/src/ampform/dynamics/kmatrix.py b/src/ampform/dynamics/kmatrix.py index 29961e2a..feaa3594 100644 --- a/src/ampform/dynamics/kmatrix.py +++ b/src/ampform/dynamics/kmatrix.py @@ -12,6 +12,7 @@ import functools from abc import ABC, abstractmethod +from typing import cast import sympy as sp @@ -50,15 +51,16 @@ def _create_matrices( return t_matrix, k_matrix @classmethod - def formulate( # type: ignore[override] # noqa: D417 + def formulate( # noqa: D417 cls, n_channels, n_poles, parametrize: bool = True, return_t_hat: bool = False, - phsp_factor: PhaseSpaceFactorProtocol = PhaseSpaceFactor, # type:ignore[assignment] + phsp_factor: PhaseSpaceFactorProtocol = PhaseSpaceFactor, angular_momentum=0, meson_radius=1, + **kwargs, ) -> sp.MutableDenseMatrix: r"""Implementation of :eq:`T-hat-in-terms-of-K-hat`. @@ -98,7 +100,7 @@ def formulate( # type: ignore[override] # noqa: D417 for i in range(n_channels) for j in range(n_channels) }).xreplace({ - sp.Symbol(f"rho{i}"): phsp_factor(s, m_a[i], m_b[i]) # pyright:ignore[reportIndexIssue] + sp.Symbol(f"rho{i}"): phsp_factor(s, m_a[i], m_b[i]) for i in range(n_channels) }) @@ -116,7 +118,7 @@ def parametrization( # noqa: PLR0917 pole_id, angular_momentum=0, meson_radius=1, - phsp_factor: PhaseSpaceFactorProtocol = PhaseSpaceFactor, # type:ignore[assignment] + phsp_factor: PhaseSpaceFactorProtocol = PhaseSpaceFactor, ) -> sp.Expr: def residue_function(pole_id, i) -> sp.Expr: return residue_constant[pole_id, i] * sp.sqrt( @@ -279,7 +281,7 @@ def _create_matrices( k_matrix = create_symbol_matrix("K", m=n_channels, n=n_channels) rho = _create_rho_matrix(n_channels) sqrt_rho: sp.MutableDenseMatrix = sp.sqrt(rho).doit() - sqrt_rho_conj: sp.MutableDenseMatrix = sp.conjugate(sqrt_rho) + sqrt_rho_conj = cast("sp.MutableDenseMatrix", sp.conjugate(sqrt_rho)) k_matrix = create_symbol_matrix("K", n_channels, n_channels) k_hat = sqrt_rho_conj.inv() * k_matrix * sqrt_rho.inv() p_vector = create_symbol_matrix("P", m=n_channels, n=1) @@ -290,15 +292,16 @@ def _create_matrices( return f_vector, k_matrix, p_vector @classmethod - def formulate( # type: ignore[override] # noqa: D417 + def formulate( # noqa: D417 cls, n_channels, n_poles, parametrize: bool = True, return_f_hat: bool = False, - phsp_factor: PhaseSpaceFactorProtocol = PhaseSpaceFactor, # type:ignore[assignment] + phsp_factor: PhaseSpaceFactorProtocol = PhaseSpaceFactor, angular_momentum=0, meson_radius=1, + **kwargs, ) -> sp.MutableDenseMatrix: r"""Implementation of :eq:`F-in-terms-of-P`. @@ -324,7 +327,8 @@ def formulate( # type: ignore[override] # noqa: D417 m_b = sp.IndexedBase("m_b", nonnegative=True) pole_id = sp.Symbol("R", integer=True, positive=True) return ( - f_vector.xreplace({ + f_vector + .xreplace({ k_matrix[i, j]: RelativisticKMatrix.parametrization( i=i, j=j, @@ -360,7 +364,7 @@ def formulate( # type: ignore[override] # noqa: D417 for i in range(n_channels) }) .xreplace({ - sp.Symbol(f"rho{i}"): phsp_factor(s, m_a[i], m_b[i]) # pyright:ignore[reportIndexIssue] + sp.Symbol(f"rho{i}"): phsp_factor(s, m_a[i], m_b[i]) for i in range(n_channels) }) ) diff --git a/src/ampform/dynamics/phasespace.py b/src/ampform/dynamics/phasespace.py index 329815ae..ec913d69 100644 --- a/src/ampform/dynamics/phasespace.py +++ b/src/ampform/dynamics/phasespace.py @@ -64,7 +64,7 @@ class PhaseSpaceFactor(sp.Expr): r"""Standard phase-space factor, using a definition consistent with `.BreakupMomentum`. See :pdg-review:`2025; Resonances; p.6`, Equation (50.11). We ignore the factor - :math:`\frac{1}{16\pi}` as done in :cite:`chungPrimerKmatrixFormalism1995`, p.5. + :math:`\frac{1}{16\pi}` as done in :cite:`Chung:1995-PrimerKmatrixFormalism`, p.5. Similarly to `.BreakupMomentum`, this class represents the numerator as a single square root for better numerical performance. This comes at the cost of a :ref:`more diff --git a/src/ampform/helicity/__init__.py b/src/ampform/helicity/__init__.py index 845a8500..49405cfe 100644 --- a/src/ampform/helicity/__init__.py +++ b/src/ampform/helicity/__init__.py @@ -15,7 +15,7 @@ from collections import OrderedDict, abc from fractions import Fraction from functools import reduce, singledispatchmethod -from typing import TYPE_CHECKING +from typing import TYPE_CHECKING, cast import attrs import sympy as sp @@ -128,7 +128,7 @@ class HelicityModel: (:func:`.natural_sorting`). Values have been extracted from the input `~qrules.transition.ReactionInfo`. """ - kinematic_variables: OrderedDict[sp.Symbol, sp.Expr] = field( + kinematic_variables: OrderedDict[sp.Basic, sp.Expr] = field( converter=_order_symbol_mapping ) """Expressions for converting four-momenta to kinematic variables.""" @@ -188,7 +188,7 @@ def rename_symbols( for amp, expr in self.amplitudes.items() }, parameter_defaults={ - symbol_mapping.get(par, par): value # type: ignore[call-overload] + symbol_mapping.get(par, par): value for par, value in self.parameter_defaults.items() }, components={ @@ -202,10 +202,10 @@ def rename_symbols( ) def __collect_symbols(self) -> set[sp.Symbol]: - symbols: set[sp.Symbol] = self.expression.free_symbols # type: ignore[assignment] + symbols = cast("set[sp.Symbol]", self.expression.free_symbols) symbols |= set(self.kinematic_variables) for expr in self.kinematic_variables.values(): - symbols |= expr.free_symbols # type: ignore[arg-type] + symbols |= expr.free_symbols return symbols @@ -249,9 +249,9 @@ def _repr_pretty_(self, p: PrettyPrinter, cycle: bool) -> None: with p.group(indent=2, open=f"{class_name}({{"): p.breakable() for par, value in self.items(): - p.pretty(par) # type: ignore[attr-defined] + p.pretty(par) # ty:ignore[unresolved-attribute] p.text(": ") - p.pretty(value) # type: ignore[attr-defined] + p.pretty(value) # ty:ignore[unresolved-attribute] p.text(",") p.breakable() p.text("})") @@ -400,7 +400,7 @@ def formulate(self) -> HelicityModel: for s in sorted(angle_expr.free_symbols, key=str) if isinstance(s, sp.Symbol) if s.name.startswith("m_") - if s.is_nonnegative # type: ignore[attr-defined] + if s.is_nonnegative ] for mass_symbol in remaining_mass_symbols: indices = _get_final_state_ids(mass_symbol) @@ -463,7 +463,7 @@ def __formulate_topology_amplitude( first_transition = transitions[0] symbol = create_amplitude_symbol(first_transition) - expression = sum(sequential_expressions) # type: ignore[assignment] + expression = sp.sympify(sum(sequential_expressions)) self.__ingredients.amplitudes[symbol] = expression return expression @@ -603,7 +603,7 @@ def _to_optional_set(values: Iterable[int] | None) -> set[int] | None: class BuilderConfiguration: """Configuration class for a `.HelicityAmplitudeBuilder`.""" - spin_alignment: SpinAlignment = field(validator=instance_of(SpinAlignment)) # type: ignore[type-abstract] + spin_alignment: SpinAlignment = field(validator=instance_of(SpinAlignment)) """Method for :doc:`aligning spin `.""" scalar_initial_state_mass: bool = field(validator=instance_of(bool)) r"""Add initial state mass as scalar value to `.parameter_defaults`. @@ -617,7 +617,7 @@ class BuilderConfiguration: """ stable_final_state_ids: set[int] | None = field( converter=_to_optional_set, - validator=optional(deep_iterable(member_validator=instance_of(int))), # type: ignore[arg-type] + validator=optional(deep_iterable(member_validator=instance_of(int))), ) r"""IDs of the final states that should be considered stable. @@ -718,7 +718,7 @@ class _HelicityModelIngredients: parameter_defaults: dict[sp.Basic, ParameterValue] = field(factory=dict) amplitudes: dict[sp.Indexed, sp.Expr] = field(factory=dict) components: dict[str, sp.Expr] = field(factory=dict) - kinematic_variables: dict[sp.Symbol, sp.Expr] = field(factory=dict) + kinematic_variables: dict[sp.Basic, sp.Expr] = field(factory=dict) def reset(self) -> None: self.parameter_defaults = {} @@ -735,14 +735,14 @@ def formulate_isobar_cg_coefficients( In the **canonical basis** (also called **partial wave basis**), :doc:`Clebsch-Gordan coefficients ` ensure that the projection of angular momentum is conserved - (:cite:`kutschkeAngularDistributionCookbook1996`, p. 4). When calling + (:cite:`Kutschke:1996-AngularDistributionCookbook`, p. 4). When calling :func:`~qrules.generate_transitions` with :code:`formalism="canonical-helicity"`, AmpForm formulates the amplitude in the canonical basis from amplitudes in the - helicity basis using the transformation in :cite:`chungSpinFormalismsUpdated2014`, - Eq. (4.32). See also :cite:`kutschkeAngularDistributionCookbook1996`, Eq. (28). + helicity basis using the transformation in :cite:`Chung:2014-SpinFormalismsUpdated`, + Eq. (4.32). See also :cite:`Kutschke:1996-AngularDistributionCookbook`, Eq. (28). This function produces the two Clebsch-Gordan coefficients in - :cite:`chungSpinFormalismsUpdated2014`, Eq. (4.32). For a two-body decay :math:`1 + :cite:`Chung:2014-SpinFormalismsUpdated`, Eq. (4.32). For a two-body decay :math:`1 \to 2, 3`, we get: .. math:: C^{s_1,\lambda}_{L,0,S,\lambda} C^{S,\lambda}_{s_2,\lambda_2,s_3,-\lambda_3} @@ -813,7 +813,7 @@ def formulate_isobar_cg_coefficients( def formulate_isobar_wigner_d(transition: StateTransition, node_id: int) -> sp.Expr: r"""Compute `~sympy.physics.quantum.spin.WignerD` for an isobar node. - Following :cite:`chungSpinFormalismsUpdated2014`, `Eq. (4.16) + Following :cite:`Chung:2014-SpinFormalismsUpdated`, `Eq. (4.16) `_, but taking the complex conjugate by flipping the sign of the azimuthal angle :math:`\phi` (see relation between Wigner-:math:`D` and Wigner-:math:`d` in `Eq. (A.1) @@ -839,7 +839,7 @@ def formulate_isobar_wigner_d(transition: StateTransition, node_id: int) -> sp.E Note that :math:`\lambda_2, \lambda_3` are ordered by their number of children, then by their state ID (see :class:`.TwoBodyDecay`). - See :cite:`kutschkeAngularDistributionCookbook1996`, Eq. (30) for an example of + See :cite:`Kutschke:1996-AngularDistributionCookbook`, Eq. (30) for an example of Wigner-:math:`D` functions in a *sequential* two-body decay. Note that this source chose :math:`\Omega=(\phi,\theta,-\phi)` as argument to the (conjugated) Wigner-:math:`D` function, just like the original paper by Jacob & Wick diff --git a/src/ampform/helicity/align/__init__.py b/src/ampform/helicity/align/__init__.py index dca4b5b0..0dea90be 100644 --- a/src/ampform/helicity/align/__init__.py +++ b/src/ampform/helicity/align/__init__.py @@ -25,8 +25,7 @@ def define_symbols(self, reaction: ReactionInfo) -> dict[sp.Symbol, sp.Expr]: .. class NoAlignment(SpinAlignment): """Sum the amplitudes *without* any spin alignment.""" - @staticmethod - def formulate_amplitude(reaction: ReactionInfo) -> sp.Expr: + def formulate_amplitude(self, reaction: ReactionInfo) -> sp.Expr: # noqa: PLR6301 outer_state_ids = get_outer_state_ids(reaction) topology_groups = group_by_topology(reaction.transitions) indices = [create_spin_projection_symbol(i) for i in outer_state_ids] @@ -35,6 +34,5 @@ def formulate_amplitude(reaction: ReactionInfo) -> sp.Expr: ] return sp.Add(*amplitude_symbols) - @staticmethod - def define_symbols(reaction: ReactionInfo) -> dict[sp.Symbol, sp.Expr]: + def define_symbols(self, reaction: ReactionInfo) -> dict[sp.Symbol, sp.Expr]: # noqa: PLR6301 return {} diff --git a/src/ampform/helicity/align/axisangle.py b/src/ampform/helicity/align/axisangle.py index ac26d9a5..3b2d1c9b 100644 --- a/src/ampform/helicity/align/axisangle.py +++ b/src/ampform/helicity/align/axisangle.py @@ -45,8 +45,7 @@ class AxisAngleAlignment(SpinAlignment): `_. """ - @staticmethod - def formulate_amplitude(reaction: ReactionInfo) -> sp.Expr: + def formulate_amplitude(self, reaction: ReactionInfo) -> sp.Expr: # noqa: PLR6301 topology_groups = group_by_topology(reaction.transitions) outer_state_ids = get_outer_state_ids(reaction) amplitude = sp.S.Zero @@ -66,8 +65,7 @@ def formulate_amplitude(reaction: ReactionInfo) -> sp.Expr: ) return amplitude - @staticmethod - def define_symbols(reaction: ReactionInfo) -> dict[sp.Symbol, sp.Expr]: + def define_symbols(self, reaction: ReactionInfo) -> dict[sp.Symbol, sp.Expr]: # noqa: PLR6301 wigner_angles = {} for topology in group_by_topology(reaction.transitions): momenta = create_four_momentum_symbols(topology) @@ -174,7 +172,7 @@ def get_helicity_rotation(state_id: int) -> Generator[PoolSum, None, None]: if len(summation.indices) == 1: idx_root = __GREEK_INDEX_NAMES[idx_root_counter] dangling_idx = sp.Symbol(f"{idx_root}{idx_suffix}", rational=True) - return summation.subs(dangling_idx, helicity_symbol) + return summation.subs(dangling_idx, helicity_symbol) # ty:ignore[invalid-return-type] return summation @@ -311,8 +309,7 @@ def __rationalize(value: _BasicType) -> _BasicType: ... @overload -def __rationalize(value) -> sp.Rational: # type: ignore[misc] - ... +def __rationalize(value) -> sp.Rational: ... def __rationalize(value): diff --git a/src/ampform/helicity/align/dpd.py b/src/ampform/helicity/align/dpd.py index 0d7b65c9..e289f76d 100644 --- a/src/ampform/helicity/align/dpd.py +++ b/src/ampform/helicity/align/dpd.py @@ -31,8 +31,8 @@ from sympy.physics.quantum.spin import WignerD if get_qrules_version() < (0, 10): - from qrules.transition import ( # type: ignore[attr-defined] - StateTransitionCollection, + from qrules.transition import ( + StateTransitionCollection, # ty:ignore[unresolved-import] ) @@ -113,26 +113,24 @@ def __call__( if get_qrules_version() < (0, 10): - T = TypeVar("T", ReactionInfo, StateTransition, StateTransitionCollection, Topology) + T = TypeVar("T", ReactionInfo, StateTransition, StateTransitionCollection, Topology) # ty:ignore[possibly-unresolved-reference] """Allowed types for :func:`relabel_edge_ids`.""" else: - T = TypeVar( # type: ignore[misc] # pyright: ignore[reportConstantRedefinition] - "T", ReactionInfo, StateTransition, Topology - ) + T = TypeVar("T", ReactionInfo, StateTransition, Topology) """Allowed types for :func:`relabel_edge_ids`.""" @singledispatch -def relabel_edge_ids(obj: T) -> T: # type: ignore[reportInvalidTypeForm] +def relabel_edge_ids(obj: T) -> T: msg = f"Cannot relabel edge IDs of a {type(obj).__name__}" raise NotImplementedError(msg) @relabel_edge_ids.register(ReactionInfo) -def _(obj: ReactionInfo) -> ReactionInfo: # type: ignore[misc] +def _(obj: ReactionInfo) -> ReactionInfo: if get_qrules_version() < (0, 10): - return ReactionInfo( # type: ignore[call-arg] - transition_groups=[relabel_edge_ids(g) for g in obj.transition_groups], # type: ignore[attr-defined] + return ReactionInfo( # ty:ignore[missing-argument] + transition_groups=[relabel_edge_ids(g) for g in obj.transition_groups], # ty:ignore[unresolved-attribute] formalism=obj.formalism, ) return ReactionInfo( @@ -144,15 +142,15 @@ def _(obj: ReactionInfo) -> ReactionInfo: # type: ignore[misc] if get_qrules_version() < (0, 10): - def __relabel_stc(obj: StateTransitionCollection) -> StateTransitionCollection: # type: ignore[misc] + def __relabel_stc(obj: StateTransitionCollection) -> StateTransitionCollection: return StateTransitionCollection([ relabel_edge_ids(transition) for transition in obj.transitions ]) - relabel_edge_ids.register(StateTransitionCollection)(__relabel_stc) + relabel_edge_ids.register(StateTransitionCollection)(__relabel_stc) # ty:ignore[possibly-unresolved-reference] -def __relabel_st(obj: StateTransition) -> StateTransition: # type: ignore[misc] +def __relabel_st(obj: StateTransition) -> StateTransition: mapping = __get_default_relabel_mapping() return attrs.evolve( obj, @@ -170,7 +168,7 @@ def __relabel_st(obj: StateTransition) -> StateTransition: # type: ignore[misc] @relabel_edge_ids.register(Topology) -def _(obj: Topology) -> Topology: # type: ignore[misc] +def _(obj: Topology) -> Topology: mapping = __get_default_relabel_mapping() return obj.relabel_edges(mapping) diff --git a/src/ampform/helicity/decay.py b/src/ampform/helicity/decay.py index 4b2179f2..4309d3fe 100644 --- a/src/ampform/helicity/decay.py +++ b/src/ampform/helicity/decay.py @@ -127,7 +127,7 @@ def _is_qrules_state_transition(obj) -> TypeGuard[StateTransition]: return all( isinstance(i, InteractionProperties) for i in obj.interactions.values() ) - return get_qrules_version() < (0, 10) and isinstance(obj, StateTransition) # type: ignore[misc] + return get_qrules_version() < (0, 10) and isinstance(obj, StateTransition) @cache @@ -200,7 +200,7 @@ def get_spectator_id(topology: Topology) -> Literal[1, 2, 3]: assert_three_body_decay(topology) decay_products = topology.get_edge_ids_outgoing_from_node(1) spectator_id_candidates = topology.outgoing_edge_ids - decay_products - return next(iter(spectator_id_candidates)) # type: ignore[arg-type] + return next(iter(spectator_id_candidates)) @cache @@ -209,7 +209,7 @@ def get_decay_product_ids( ) -> tuple[Literal[1, 2, 3], Literal[1, 2, 3]]: assert_three_body_decay(topology) decay_products = topology.get_edge_ids_outgoing_from_node(1) - return tuple(sorted(decay_products)) # type: ignore[return-value] + return tuple(sorted(decay_products)) # ty:ignore[invalid-return-type] def get_helicity_info( @@ -466,9 +466,9 @@ def perform_combinatorics( >>> assert len(permutated_transitions) == 2 """ if get_qrules_version() < (0, 10): - graph = transition.to_graph() # type: ignore[attr-defined,return-value] + graph = transition.to_graph() # ty:ignore[unresolved-attribute] mutable_graphs = perform_external_edge_identical_particle_combinatorics(graph) - return [StateTransition.from_graph(g) for g in mutable_graphs] # type: ignore[attr-defined] + return [StateTransition.from_graph(g) for g in mutable_graphs] # ty:ignore[unresolved-attribute] graph = transition.convert(lambda s: (s.particle, s.spin_projection)).unfreeze() combinations = perform_external_edge_identical_particle_combinatorics(graph) return [g.freeze().convert(lambda s: State(*s)) for g in combinations] diff --git a/src/ampform/io/__init__.py b/src/ampform/io/__init__.py index fb15149c..6e019498 100644 --- a/src/ampform/io/__init__.py +++ b/src/ampform/io/__init__.py @@ -52,7 +52,7 @@ def _(obj: complex, **kwargs) -> str: def __downcast(obj: float, **kwargs) -> float: - if obj.is_integer(): + if isinstance(obj, float) and obj.is_integer(): return int(obj) return obj @@ -136,4 +136,4 @@ def _print_Indexed_latex(self, printer, *args) -> str: # noqa: N802 indices = ", ".join(map(printer._print, self.indices)) return f"{base}_{{{indices}}}" - sp.Indexed._latex = _print_Indexed_latex # type: ignore[attr-defined] + sp.Indexed._latex = _print_Indexed_latex # ty:ignore[unresolved-attribute] diff --git a/src/ampform/kinematics/angles.py b/src/ampform/kinematics/angles.py index d905989a..7e50972a 100644 --- a/src/ampform/kinematics/angles.py +++ b/src/ampform/kinematics/angles.py @@ -250,7 +250,7 @@ def formulate_theta_hat_angle( raise ValueError(msg) symbol = sp.Symbol(Rf"\hat\theta_{isobar_id}({aligned_subsystem})", real=True) if isobar_id == aligned_subsystem: - return symbol, sp.S.Zero + return symbol, sp.S.Zero # ty:ignore[invalid-return-type] if (isobar_id, aligned_subsystem) in {(3, 1), (1, 2), (2, 3)}: remaining_id = next(iter(allowed_ids - {isobar_id, aligned_subsystem})) m0 = sp.Symbol("m_0", nonnegative=True) @@ -274,7 +274,7 @@ def formulate_theta_hat_angle( isobar_id=aligned_subsystem, aligned_subsystem=isobar_id, ) - return symbol, -theta + return symbol, -theta # ty:ignore[invalid-return-type] def formulate_zeta_angle( # noqa: C901, PLR0911, PLR0914 @@ -296,7 +296,7 @@ def formulate_zeta_angle( # noqa: C901, PLR0911, PLR0914 ) return zeta_symbol, zeta_expr if aligned_subsystem == reference_subsystem: - return zeta_symbol, sp.S.Zero + return zeta_symbol, sp.S.Zero # ty:ignore[invalid-return-type] m0, m1, m2, m3 = sp.symbols("m_(:4)", nonnegative=True) s1 = sp.Symbol("m_23", nonnegative=True) ** 2 s2 = sp.Symbol("m_13", nonnegative=True) ** 2 @@ -366,7 +366,7 @@ def formulate_zeta_angle( # noqa: C901, PLR0911, PLR0914 aligned_subsystem=reference_subsystem, reference_subsystem=aligned_subsystem, ) - return zeta_symbol, -zeta_expr + return zeta_symbol, -zeta_expr # ty:ignore[invalid-return-type] msg = ( "No expression for" f" ζ^{rotated_state}_{aligned_subsystem}({reference_subsystem})" diff --git a/src/ampform/kinematics/lorentz.py b/src/ampform/kinematics/lorentz.py index 35440fdc..65999520 100644 --- a/src/ampform/kinematics/lorentz.py +++ b/src/ampform/kinematics/lorentz.py @@ -67,19 +67,19 @@ def evaluate(self) -> ArraySlice: return ArraySlice(self.momentum, (slice(None), 0)) -def _implement_latex_subscript( # pyright: ignore[reportUnusedFunction] +def _implement_latex_subscript( subscript: str, ) -> Callable[[type[ExprClass]], type[ExprClass]]: def decorator(decorated_class: type[ExprClass]) -> type[ExprClass]: def _latex_repr_(self: sp.Expr, printer: LatexPrinter, *args) -> str: - momentum = printer._print(self.momentum) # type: ignore[attr-defined] - if printer._needs_mul_brackets(self.momentum): # type: ignore[attr-defined] # noqa: SLF001 + momentum = printer._print(self.momentum) # ty:ignore[unresolved-attribute] + if printer._needs_mul_brackets(self.momentum): # noqa: SLF001 # ty:ignore[unresolved-attribute] momentum = Rf"\left({momentum}\right)" else: momentum = Rf"{{{momentum}}}" return f"{momentum}_{subscript}" - decorated_class._latex_repr_ = _latex_repr_ # type: ignore[assignment,attr-defined] + decorated_class._latex_repr_ = _latex_repr_ # ty:ignore[unresolved-attribute] return decorated_class return decorator @@ -154,7 +154,7 @@ class EuclideanNormSquared(sp.Expr): _latex_repr_ = R"\left|{vector}\right|^{{2}}" def evaluate(self) -> ArrayAxisSum: - return ArrayAxisSum(self.vector**2, axis=1) # type: ignore[operator] + return ArrayAxisSum(self.vector**2, axis=1) def _numpycode(self, printer: NumPyPrinter, *args) -> str: return printer._print(self.evaluate(), *args) @@ -236,7 +236,7 @@ class BoostZMatrix(sp.Expr): def as_explicit(self) -> sp.MutableDenseMatrix: beta = self.beta - gamma = 1 / ComplexSqrt(1 - beta**2) # type: ignore[operator] + gamma = 1 / ComplexSqrt(1 - beta**2) return sp.Matrix([ [gamma, 0, 0, -gamma * beta], [0, 1, 0, 0], @@ -246,7 +246,7 @@ def as_explicit(self) -> sp.MutableDenseMatrix: def evaluate(self) -> _BoostZMatrixImplementation: beta = self.beta - gamma = 1 / sp.sqrt(1 - beta**2) # type: ignore[operator] + gamma = 1 / sp.sqrt(1 - beta**2) n_events = self.n_events return _BoostZMatrixImplementation( beta=beta, diff --git a/src/ampform/kinematics/phasespace.py b/src/ampform/kinematics/phasespace.py index c376c195..b5a88bab 100644 --- a/src/ampform/kinematics/phasespace.py +++ b/src/ampform/kinematics/phasespace.py @@ -184,9 +184,9 @@ class Kibble(sp.Expr): def evaluate(self) -> Kallen: sigma1, sigma2, sigma3, m0, m1, m2, m3 = self.args return Kallen( - Kallen(sigma2, m2**2, m0**2), # type: ignore[operator] - Kallen(sigma3, m3**2, m0**2), # type: ignore[operator] - Kallen(sigma1, m1**2, m0**2), # type: ignore[operator] + Kallen(sigma2, m2**2, m0**2), + Kallen(sigma3, m3**2, m0**2), + Kallen(sigma1, m1**2, m0**2), ) @@ -201,7 +201,7 @@ class Kallen(sp.Expr): def evaluate(self) -> sp.Expr: x, y, z = self.args - return x**2 + y**2 + z**2 - 2 * x * y - 2 * y * z - 2 * z * x # type: ignore[operator] + return x**2 + y**2 + z**2 - 2 * x * y - 2 * y * z - 2 * z * x def is_within_phasespace( diff --git a/src/ampform/sympy/__init__.py b/src/ampform/sympy/__init__.py index 7c19e03d..01d3e052 100644 --- a/src/ampform/sympy/__init__.py +++ b/src/ampform/sympy/__init__.py @@ -17,38 +17,32 @@ import sys import warnings from abc import abstractmethod -from typing import TYPE_CHECKING +from typing import TYPE_CHECKING, cast import sympy as sp from sympy.printing.conventions import split_super_sub from sympy.printing.precedence import PRECEDENCE from sympy.printing.pycode import _unpack_integral_limits # noqa: PLC2701 -from ._decorator import ( - ExprClass, # noqa: F401 # pyright: ignore[reportUnusedImport] - SymPyAssumptions, # noqa: F401 # pyright: ignore[reportUnusedImport] - argument, # noqa: F401 # pyright: ignore[reportUnusedImport] - unevaluated, # noqa: F401 # pyright: ignore[reportUnusedImport] -) -from .cached import ( - doit as perform_cached_doit, # noqa: F401 # pyright: ignore[reportUnusedImport] -) -from .cached import ( - xreplace as perform_cached_substitution, # noqa: F401 # pyright: ignore[reportUnusedImport] -) -from .deprecated import ( - UnevaluatedExpression, # noqa: F401 # pyright: ignore[reportUnusedImport] - create_expression, # noqa: F401 # pyright: ignore[reportUnusedImport] - implement_doit_method, # noqa: F401 # pyright: ignore[reportUnusedImport] - implement_expr, # pyright: ignore[reportUnusedImport] # noqa: F401 - make_commutative, # pyright: ignore[reportUnusedImport] # noqa: F401 -) +from ._decorator import ExprClass as ExprClass +from ._decorator import SymPyAssumptions as SymPyAssumptions +from ._decorator import argument as argument +from ._decorator import unevaluated as unevaluated +from .cached import doit as perform_cached_doit # noqa: F401 +from .cached import xreplace as perform_cached_substitution # noqa: F401 +from .deprecated import UnevaluatedExpression as UnevaluatedExpression +from .deprecated import create_expression as create_expression +from .deprecated import implement_doit_method as implement_doit_method +from .deprecated import implement_expr as implement_expr +from .deprecated import make_commutative as make_commutative if sys.version_info >= (3, 12): from typing import override else: from typing_extensions import override if TYPE_CHECKING: + from collections.abc import Callable + if sys.version_info >= (3, 11): from typing import Self else: @@ -132,7 +126,7 @@ def create_symbol_matrix(name: str, m: int, n: int) -> sp.MutableDenseMatrix: `~sympy.tensor.indexed.Indexed` instances. To convert these `~sympy.tensor.indexed.Indexed` instances to a - `~sympy.core.symbol.Symbol`, use :func:`symplot.substitute_indexed_symbols`. + `~sympy.core.symbol.Symbol`, use :func:`.substitute_indexed_symbols`. >>> create_symbol_matrix("A", m=2, n=3) Matrix([ @@ -140,7 +134,7 @@ def create_symbol_matrix(name: str, m: int, n: int) -> sp.MutableDenseMatrix: [A[1, 0], A[1, 1], A[1, 2]]]) """ symbol = sp.IndexedBase(name, shape=(m, n)) - return sp.Matrix([[symbol[i, j] for j in range(n)] for i in range(m)]) # pyright:ignore[reportIndexIssue] + return sp.Matrix([[symbol[i, j] for j in range(n)] for i in range(m)]) class PoolSum(sp.Expr): @@ -174,25 +168,25 @@ def __new__( raise ValueError(msg) converted_indices.append((idx_symbol, values)) args = sp.sympify((expression, *converted_indices)) - expr: PoolSum = sp.Expr.__new__(cls, *args, **hints) + expr: PoolSum = sp.Expr.__new__(cls, *args, **hints) # ty:ignore[not-iterable] if evaluate: - return expr.evaluate() # type: ignore[return-value] + return expr.evaluate() return expr @property def expression(self) -> sp.Expr: - return self.args[0] # type: ignore[return-value] + return self.args[0] # ty:ignore[invalid-return-type] @property def indices(self) -> list[tuple[sp.Symbol, tuple[sp.Float, ...]]]: - return self.args[1:] # type: ignore[return-value] + return self.args[1:] @property def free_symbols(self) -> set[sp.Basic]: return super().free_symbols - {s for s, _ in self.indices} @override - def doit(self, deep: bool = True) -> sp.Expr: # type: ignore[misc] + def doit(self, deep: bool = True) -> sp.Expr: # ty:ignore[invalid-method-override] expr = self.evaluate() if deep: return expr.doit() @@ -319,6 +313,45 @@ def determine_indices(symbol: sp.Basic) -> list[int]: return list(indices) +def rename_symbols( + expression: sp.Expr, renames: Callable[[str], str] | dict[str, str] +) -> sp.Expr: + r"""Rename symbols in an expression. + + >>> a, b, x = sp.symbols(R"a \beta x") + >>> expr = a + b * x + >>> rename_symbols(expr, renames={"a": "A", R"\beta": "B"}) + A + B*x + >>> rename_symbols(expr, renames=lambda s: s.replace("\\", "")) + a + beta*x + >>> rename_symbols(expr, renames={"non-existent": "c"}) + Traceback (most recent call last): + ... + KeyError: "No symbol with name 'non-existent' in expression" + """ + substitutions: dict[sp.Symbol, sp.Symbol] = {} + free_symbols = cast("set[sp.Symbol]", expression.free_symbols) + if callable(renames): + for old_symbol in free_symbols: + new_name = renames(old_symbol.name) + new_symbol = sp.Symbol(new_name, **old_symbol.assumptions0) + substitutions[old_symbol] = new_symbol + elif isinstance(renames, dict): + for old_name, new_name in renames.items(): + matches = (s for s in free_symbols if s.name == old_name) + try: + old_symbol = next(matches) + except StopIteration as e: + msg = f"No symbol with name '{old_name}' in expression" + raise KeyError(msg) from e + new_symbol = sp.Symbol(new_name, **old_symbol.assumptions0) + substitutions[old_symbol] = new_symbol + else: + msg = f"Cannot rename from type {type(renames).__name__}" + raise TypeError(msg) + return expression.xreplace(substitutions) + + class UnevaluatableIntegral(sp.Integral): """See :ref:`usage/sympy:Numerical integrals`. @@ -336,7 +369,7 @@ def doit(self, **hints): return self.func(*args) @override - def _numpycode(self, printer, *args) -> str: # type:ignore[misc] + def _numpycode(self, printer, *args) -> str: # ty:ignore[invalid-explicit-override] _warn_if_scipy_not_installed() integration_vars, limits = _unpack_integral_limits(self) if len(limits) != 1 or len(integration_vars) != 1: @@ -361,7 +394,7 @@ def _numpycode(self, printer, *args) -> str: # type:ignore[misc] def _warn_if_scipy_not_installed() -> None: try: - import scipy # noqa: F401, PLC0415 # pyright: ignore[reportUnusedImport, reportMissingImports] + import scipy # noqa: F401, PLC0415 except ImportError: warnings.warn( "Scipy is not installed. Install with 'pip install scipy' or with 'pip" diff --git a/src/ampform/sympy/_array_expressions.py b/src/ampform/sympy/_array_expressions.py index f2be4427..60b598d0 100644 --- a/src/ampform/sympy/_array_expressions.py +++ b/src/ampform/sympy/_array_expressions.py @@ -71,15 +71,15 @@ def __new__(cls, parent: sp.Expr, indices: Iterable) -> Self: @property def parent(self) -> sp.Expr: - return self._args[0] # type: ignore[return-value] + return self._args[0] # ty:ignore[invalid-return-type] @property def indices(self) -> sp.Tuple: - return self._args[1] # type: ignore[return-value] + return self._args[1] # ty:ignore[invalid-return-type] # required for lambdify -_ArrayExpr._iterable = False # type: ignore[attr-defined] # noqa: SLF001 +_ArrayExpr._iterable = False # noqa: SLF001 @overload @@ -93,7 +93,7 @@ def _array_symbol_getitem(self: type[ArraySymbol], key: slice) -> ArraySlice: .. @overload -def _array_symbol_getitem( # type: ignore[misc] +def _array_symbol_getitem( self: type[ArraySymbol], key: tuple[sp.Basic | int, ...] ) -> ArrayElement: ... @@ -114,7 +114,7 @@ def _array_symbol_getitem(self, key): return ArrayElement(self, indices) -ArraySymbol.__getitem__ = _array_symbol_getitem # type: ignore[assignment] +ArraySymbol.__getitem__ = _array_symbol_getitem # ty:ignore[invalid-assignment] def _normalize_index(idx, axis_size: sp.Expr | None): @@ -129,8 +129,8 @@ def _normalize_index(idx, axis_size: sp.Expr | None): class ArraySlice(_ArrayExpr): - parent: sp.Basic = property(lambda self: self.args[0]) # type: ignore[assignment] - indices: tuple[sp.Tuple, ...] = property(lambda self: tuple(self.args[1])) # type: ignore[assignment] + parent: sp.Basic = property(lambda self: self.args[0]) # ty:ignore[invalid-assignment] + indices: tuple[sp.Tuple, ...] = property(lambda self: tuple(self.args[1])) # ty:ignore[invalid-assignment] is_commutative = True @override @@ -152,7 +152,7 @@ def __new__( return sp.Expr.__new__(cls, parent, sp.Tuple(*normalized_indices)) @property - def shape(self) -> tuple[sp.Basic | int, ...]: # type: ignore[override] + def shape(self) -> tuple[sp.Basic | int, ...]: parent_shape = get_shape(self.parent) shape = [ _compute_slice_size(idx, axis_size) @@ -201,7 +201,7 @@ def normalize(i, parentsize) -> tuple[sp.Basic, sp.Basic, sp.Basic]: raise IndexError start, stop, step = tuple(none if i is None else i for i in (start, stop, step)) - return start, stop, step + return start, stop, step # ty:ignore[invalid-return-type] def _print_latex_ArrayElement( # noqa: N802 @@ -255,10 +255,10 @@ def _slice_to_str(self: Printer, x, dim) -> str: return ":".join("" if xi in {none, None} else self._print(xi) for xi in x) -LatexPrinter._print_ArrayElement = _print_latex_ArrayElement # type: ignore[assignment] # noqa: SLF001 -LatexPrinter._print_ArraySlice = _print_latex_ArraySlice # type: ignore[attr-defined] # noqa: SLF001 -StrPrinter._print_ArrayElement = _print_str_ArrayElement # type: ignore[assignment] # noqa: SLF001 -StrPrinter._print_ArraySlice = _print_str_ArraySlice # type: ignore[attr-defined] # noqa: SLF001 +LatexPrinter._print_ArrayElement = _print_latex_ArrayElement # noqa: SLF001 # ty:ignore[invalid-assignment] +LatexPrinter._print_ArraySlice = _print_latex_ArraySlice # noqa: SLF001 +StrPrinter._print_ArrayElement = _print_str_ArrayElement # noqa: SLF001 # ty:ignore[invalid-assignment] +StrPrinter._print_ArraySlice = _print_str_ArraySlice # noqa: SLF001 class ArraySum(sp.Expr): @@ -266,7 +266,7 @@ class ArraySum(sp.Expr): @override def __new__(cls, *terms: sp.Basic, **hints) -> Self: - terms = sp.sympify(terms) + terms = sp.sympify(terms) # ty:ignore[invalid-assignment] return sp.Expr.__new__(cls, *terms, **hints) @property @@ -280,7 +280,7 @@ def _latex(self, printer: LatexPrinter, *args) -> str: name = next(iter(names)) subscript = "".join(map(_get_subscript, self.terms)) return f"{{{name}}}_{{{subscript}}}" - return printer._print_ArraySum(self) # type: ignore[attr-defined] # noqa: SLF001 + return printer._print_ArraySum(self) # noqa: SLF001 def _print_array_sum(self: Printer, expr: ArraySum) -> str: @@ -288,7 +288,7 @@ def _print_array_sum(self: Printer, expr: ArraySum) -> str: return " + ".join(terms) -Printer._print_ArraySum = _print_array_sum # type: ignore[attr-defined] # noqa: SLF001 +Printer._print_ArraySum = _print_array_sum # noqa: SLF001 def _get_subscript(symbol: sp.Basic) -> str: @@ -327,15 +327,15 @@ def __new__(cls, array: sp.Expr, axis: int | None = None, **hints) -> Self: msg = "Only single digits allowed for axis" raise TypeError(msg) args = sp.sympify((array, axis)) - return sp.Expr.__new__(cls, *args, **hints) + return sp.Expr.__new__(cls, *args, **hints) # ty:ignore[not-iterable] @property def array(self) -> sp.Expr: - return self.args[0] # type: ignore[return-value] + return self.args[0] # ty:ignore[invalid-return-type] @property def axis(self) -> sp.Integer | None: - return self.args[1] # type: ignore[return-value] + return self.args[1] # ty:ignore[invalid-return-type] def _latex(self, printer: LatexPrinter, *args) -> str: array = printer._print(self.array) @@ -363,12 +363,12 @@ class ArrayMultiplication(sp.Expr): @override def __new__(cls, *tensors: sp.Basic, **hints) -> Self: - tensors = sp.sympify(tensors) + tensors = sp.sympify(tensors) # ty:ignore[invalid-assignment] return sp.Expr.__new__(cls, *tensors, **hints) @property def tensors(self) -> list[sp.Expr]: - return self.args # type: ignore[return-value] + return self.args # ty:ignore[invalid-return-type] def _latex(self, printer: LatexPrinter, *args) -> str: tensors = map(printer._print, self.tensors) @@ -418,7 +418,7 @@ class MatrixMultiplication(sp.Expr): @override def __new__(cls, *tensors: sp.Basic, **hints) -> Self: - tensors = sp.sympify(tensors) + tensors = sp.sympify(tensors) # ty:ignore[invalid-assignment] return sp.Expr.__new__(cls, *tensors, **hints) @property diff --git a/src/ampform/sympy/_decorator.py b/src/ampform/sympy/_decorator.py index 7adebd70..b572ad66 100644 --- a/src/ampform/sympy/_decorator.py +++ b/src/ampform/sympy/_decorator.py @@ -72,11 +72,11 @@ class SymPyAssumptions(TypedDict, total=False): @overload -def argument(*, default: T = MISSING, sympify: bool = True) -> T: ... # type: ignore[assignment] +def argument(*, default: T = MISSING, sympify: bool = True) -> T: ... # ty:ignore[invalid-parameter-default] @overload def argument( *, - default_factory: Callable[[], T] = MISSING, # type: ignore[assignment] + default_factory: Callable[[], T] = MISSING, # ty:ignore[invalid-parameter-default] sympify: bool = True, ) -> T: ... def argument( @@ -204,16 +204,16 @@ def unevaluated( assumptions["commutative"] = True def decorator(cls: type[ExprClass]) -> type[ExprClass]: - cls = _implement_new_method(cls) + cls = _implement_new_method(cls) # ty:ignore[invalid-assignment] if implement_doit: - cls = _implement_doit(cls) + cls = _implement_doit(cls) # ty:ignore[invalid-assignment] typos = ["_latex_repr"] for typo in typos: if hasattr(cls, typo): msg = f"Class defines a {typo} attribute, but it should be _latex_repr_" warnings.warn(msg, category=UserWarning, stacklevel=1) if hasattr(cls, "_latex_repr_"): - cls = _implement_latex_repr(cls) + cls = _implement_latex_repr(cls) # ty:ignore[invalid-assignment] _set_assumptions(**assumptions)(cls) return cls @@ -248,11 +248,11 @@ def _implement_new_method(cls: type[ExprClass]) -> type[ExprClass]: frozen=False, )(cls) cls = _update_field_metadata(cls) - non_sympy_fields = tuple(f for f in _get_fields(cls) if not _is_sympify(f)) # type: ignore[arg-type] - cls.__slots__ = tuple(f.name for f in non_sympy_fields) # type: ignore[arg-type] + non_sympy_fields = tuple(f for f in _get_fields(cls) if not _is_sympify(f)) + cls.__slots__ = tuple(f.name for f in non_sympy_fields) @functools.wraps(cls.__new__) - @_insert_args_in_signature([f.name for f in _get_fields(cls)], idx=1) # type:ignore[arg-type] + @_insert_args_in_signature([f.name for f in _get_fields(cls)], idx=1) def new_method(cls, *args, evaluate: bool = False, **kwargs) -> type[ExprClass]: fields_with_values, hints = _extract_field_values(cls, *args, **kwargs) fields_with_sympified_values = { @@ -271,18 +271,18 @@ def new_method(cls, *args, evaluate: bool = False, **kwargs) -> type[ExprClass]: return expr.evaluate() return expr - cls.__new__ = new_method # type: ignore[assignment] - cls.__getnewargs__ = _get_arguments # type: ignore[assignment,method-assign] - cls._hashable_content = _hashable_content_method # type: ignore[method-assign] + cls.__new__ = new_method + cls.__getnewargs__ = _get_arguments + cls._hashable_content = _hashable_content_method if non_sympy_fields: - cls._eval_subs = _eval_subs_method # type: ignore[method-assign] - cls._xreplace = _xreplace_method # type: ignore[method-assign] + cls._eval_subs = _eval_subs_method + cls._xreplace = _xreplace_method return cls def _update_field_metadata(cls: T) -> T: """Set the :code:`sympify` metadata for all fields of a dataclass-like class.""" - for field in _get_fields(cls): # type: ignore[arg-type] + for field in _get_fields(cls): new_metadata = dict(field.metadata) if "sympify" not in new_metadata: new_metadata["sympify"] = True @@ -291,7 +291,7 @@ def _update_field_metadata(cls: T) -> T: @overload -def _get_hashable_object(obj: type) -> str: ... # type: ignore[overload-overlap] +def _get_hashable_object(obj: type) -> str: ... @overload def _get_hashable_object(obj: H) -> H: ... @overload @@ -351,7 +351,7 @@ def _extract_field_values( def _safe_sympify(field: Field, value: dict[Field, Any]) -> dict[Field, Any]: if _is_sympify(field): try: - return sp.sympify(value) + return sp.sympify(value) # ty:ignore[invalid-return-type] except (sp.SympifyError, TypeError, SymPyDeprecationWarning) as exc: msg = ( f"Attribute {field.name} could not be sympified. Did you forget to mark" @@ -376,7 +376,7 @@ def _implement_latex_repr(cls: type[T]) -> type[T]: ) raise NotImplementedError(msg) if callable(_latex_repr_): - cls._latex = _latex_repr_ # type: ignore[attr-defined] + cls._latex = _latex_repr_ else: attr_names = _get_attribute_names(cls) @@ -384,9 +384,9 @@ def latex_method(self, printer: LatexPrinter, *args) -> str: format_kwargs = { name: printer._print(getattr(self, name), *args) for name in attr_names } - return _latex_repr_.format(**format_kwargs) # type: ignore[union-attr] + return _latex_repr_.format(**format_kwargs) - cls._latex = latex_method # type: ignore[attr-defined] + cls._latex = latex_method return cls @@ -401,7 +401,7 @@ def doit_method(self, deep: bool = True) -> sp.Expr: return expr.doit() return expr - cls.doit = doit_method # type: ignore[assignment] + cls.doit = doit_method # ty:ignore[invalid-assignment] return cls diff --git a/src/ampform/sympy/cached.py b/src/ampform/sympy/cached.py index ca0ead56..e8bfb79c 100644 --- a/src/ampform/sympy/cached.py +++ b/src/ampform/sympy/cached.py @@ -6,7 +6,7 @@ from __future__ import annotations from functools import cache -from typing import TYPE_CHECKING, Protocol, overload, runtime_checkable +from typing import TYPE_CHECKING, Any, Protocol, overload, runtime_checkable import sympy as sp from frozendict import frozendict @@ -58,36 +58,34 @@ def trigsimp(expr: sp.Expr, *args, **kwargs) -> sp.Expr: return sp.trigsimp(expr, *args, **kwargs) -def subs(expr: sp.Expr, substitutions: Mapping[sp.Basic, sp.Basic]) -> sp.Expr: +def subs(expr: sp.Expr, substitutions: Mapping[sp.Basic, Any]) -> sp.Expr: """Call :meth:`~sympy.core.basic.Basic.subs` and cache the result to disk.""" return _subs_impl(expr, frozendict(substitutions)) @cache @cache_to_disk(function_name="subs", dependencies=["sympy"]) -def _subs_impl(expr: sp.Expr, substitutions: frozendict[sp.Basic, sp.Basic]) -> sp.Expr: +def _subs_impl(expr: sp.Expr, substitutions: frozendict[sp.Basic, Any]) -> sp.Expr: return expr.xreplace(substitutions) -def xreplace(expr: sp.Expr, substitutions: Mapping[sp.Basic, sp.Basic]) -> sp.Expr: +def xreplace(expr: sp.Expr, substitutions: Mapping[sp.Basic, Any]) -> sp.Expr: """Call :meth:`~sympy.core.basic.Basic.xreplace` and cache the result to disk.""" return _xreplace_impl(expr, frozendict(substitutions)) @cache @cache_to_disk(function_name="xreplace", dependencies=["sympy"]) -def _xreplace_impl( - expr: sp.Expr, substitutions: frozendict[sp.Basic, sp.Basic] -) -> sp.Expr: +def _xreplace_impl(expr: sp.Expr, substitutions: frozendict[sp.Basic, Any]) -> sp.Expr: return expr.xreplace(substitutions) @overload def unfold(obj: Model) -> sp.Expr: ... @overload -def unfold(obj: sp.Expr, substitutions: Mapping[sp.Basic, sp.Basic]) -> sp.Expr: ... +def unfold(obj: sp.Expr, substitutions: Mapping[sp.Basic, Any]) -> sp.Expr: ... def unfold( - obj: sp.Expr | Model, substitutions: Mapping[sp.Basic, sp.Basic] | None = None + obj: sp.Expr | Model, substitutions: Mapping[sp.Basic, Any] | None = None ) -> sp.Expr: """Efficiently perform both substitutions and :code:`doit()`.""" if isinstance(obj, Model): @@ -105,7 +103,7 @@ def intensity(self) -> sp.Expr: ... def amplitudes(self) -> Mapping[sp.Basic, sp.Basic]: ... -def _unfold_impl(expr: sp.Expr, substitutions: Mapping[sp.Basic, sp.Basic]) -> sp.Expr: +def _unfold_impl(expr: sp.Expr, substitutions: Mapping[sp.Basic, Any]) -> sp.Expr: substitutions = _unfold_substitutions(frozendict(substitutions)) expr = doit(expr) return xreplace(expr, substitutions) @@ -113,6 +111,6 @@ def _unfold_impl(expr: sp.Expr, substitutions: Mapping[sp.Basic, sp.Basic]) -> s @cache def _unfold_substitutions( - substitutions: frozendict[sp.Basic, sp.Basic], -) -> frozendict[sp.Basic, sp.Basic]: + substitutions: frozendict[sp.Basic, Any], +) -> frozendict[sp.Basic, Any]: return frozendict({k: doit(v) for k, v in substitutions.items()}) diff --git a/src/ampform/sympy/deprecated.py b/src/ampform/sympy/deprecated.py index 47484fae..80fb019b 100644 --- a/src/ampform/sympy/deprecated.py +++ b/src/ampform/sympy/deprecated.py @@ -98,7 +98,7 @@ def __new__(cls, *args, name: str | None = None, **hints) -> Self: # https://github.com/sympy/sympy/blob/1.8/sympy/core/basic.py#L113-L119 obj = object.__new__(cls) obj._args = args # noqa: SLF001 - obj._assumptions = cls.default_assumptions # type: ignore[attr-defined] # noqa: SLF001 + obj._assumptions = cls.default_assumptions # noqa: SLF001 obj._mhash = None # cspell:ignore mhash # noqa: SLF001 obj._name = name # noqa: SLF001 return obj @@ -111,7 +111,7 @@ def __getnewargs_ex__(self) -> tuple[tuple, dict]: return args, kwargs @override - def _hashable_content(self) -> tuple: # type:ignore[misc] + def _hashable_content(self) -> tuple: # https://github.com/sympy/sympy/blob/1.10/sympy/core/basic.py#L157-L165 # name is converted to string because unstable hash for None return (*super()._hashable_content(), str(self._name)) @@ -208,13 +208,13 @@ def new_method( if len(args) != n_args: msg = f"{n_args} parameters expected, got {len(args)}" raise ValueError(msg) - args = sp.sympify(args) + args = sp.sympify(args) # ty:ignore[invalid-assignment] expr = UnevaluatedExpression.__new__(cls, *args) if evaluate: - return expr.evaluate() # type: ignore[return-value] + return expr.evaluate() return expr - decorated_class.__new__ = new_method # type: ignore[assignment] + decorated_class.__new__ = new_method # ty:ignore[invalid-assignment] return decorated_class return decorator @@ -238,14 +238,14 @@ def implement_doit_method( stacklevel=1, ) - @functools.wraps(decorated_class.doit) # type: ignore[attr-defined] + @functools.wraps(decorated_class.doit) def doit_method(self: UnevaluatedExpression, deep: bool = True) -> sp.Expr: expr = self.evaluate() if deep: return expr.doit() return expr - decorated_class.doit = doit_method # type: ignore[assignment] + decorated_class.doit = doit_method # ty:ignore[invalid-assignment] return decorated_class @@ -266,8 +266,8 @@ def make_commutative( category=DeprecationWarning, stacklevel=1, ) - decorated_class.is_commutative = True # type: ignore[attr-defined] - decorated_class.is_extended_real = True # type: ignore[attr-defined] + decorated_class.is_commutative = True + decorated_class.is_extended_real = True return decorated_class @@ -287,8 +287,8 @@ def create_expression( ) args = sp.sympify(args) if issubclass(cls, UnevaluatedExpression): - expr = UnevaluatedExpression.__new__(cls, *args, name=name, **kwargs) + expr = UnevaluatedExpression.__new__(cls, *args, name=name, **kwargs) # ty:ignore[not-iterable] if evaluate: - return expr.evaluate() # type: ignore[return-value] - return expr # type: ignore[return-value] - return sp.Expr.__new__(cls, *args, **kwargs) # type: ignore[return-value] + return expr.evaluate() + return expr + return sp.Expr.__new__(cls, *args, **kwargs) # ty:ignore[not-iterable] diff --git a/src/ampform/sympy/math.py b/src/ampform/sympy/math.py index dc04fb90..59bd639c 100644 --- a/src/ampform/sympy/math.py +++ b/src/ampform/sympy/math.py @@ -4,7 +4,7 @@ from __future__ import annotations import sys -from typing import TYPE_CHECKING, overload +from typing import TYPE_CHECKING, cast, overload import sympy as sp from sympy.plotting.experimental_lambdify import Lambdifier @@ -35,14 +35,14 @@ class ComplexSqrt(NumPyPrintable): is_extended_real = True @overload - def __new__(cls, x: sp.Number, *args, **kwargs) -> sp.Expr: ... # type: ignore[misc] + def __new__(cls, x: sp.Number, *args, **kwargs) -> sp.Expr: ... @overload - def __new__(cls, x: sp.Expr, *args, **kwargs) -> ComplexSqrt: ... # type:ignore[misc] + def __new__(cls, x: sp.Expr, *args, **kwargs) -> ComplexSqrt: ... @override def __new__(cls, x, *args, **kwargs): x = sp.sympify(x) args = sp.sympify((x, *args)) - expr: ComplexSqrt = sp.Expr.__new__(cls, *args, **kwargs) # type: ignore[annotation-unchecked] + expr: ComplexSqrt = sp.Expr.__new__(cls, *args, **kwargs) # ty:ignore[not-iterable] if isinstance(x, sp.Number): return expr.get_definition() return expr @@ -70,7 +70,7 @@ def __print_complex(self, printer: Printer) -> str: def get_definition(self) -> sp.Piecewise: """Get a symbolic definition for this expression class.""" - x: sp.Expr = self.args[0] # type: ignore[assignment] + x = cast("sp.Expr", self.args[0]) return sp.Piecewise( (sp.I * sp.sqrt(-x), x < 0), (sp.sqrt(x), True), diff --git a/src/ampform/sympy/slider.py b/src/ampform/sympy/slider.py new file mode 100644 index 00000000..fbb52a21 --- /dev/null +++ b/src/ampform/sympy/slider.py @@ -0,0 +1,63 @@ +"""Helper functions for working with `sympy` expressions and `ipywidgets`.""" + +from __future__ import annotations + +from typing import TYPE_CHECKING + +import sympy as sp +from sympy.printing.latex import translate + +if TYPE_CHECKING: # pragma: no cover + import ipywidgets as w + + Slider = w.FloatSlider | w.IntSlider + """Allowed :doc:`ipywidgets ` slider types.""" + + +def create_slider(symbol: sp.Symbol, **kwargs) -> Slider: + r"""Create an `int` or `float` slider, depending on Symbol assumptions. + + The description for the slider is rendered as LaTeX from the + `~sympy.core.symbol.Symbol` name. + + >>> create_slider(sp.Symbol("a")) + FloatSlider(value=0.0, description='\\(a\\)') + >>> create_slider(sp.Symbol("n0", integer=True)) + IntSlider(value=0, description='\\(n_{0}\\)') + """ + _assert_ipywidgets_installed() + import ipywidgets as w # noqa: PLC0415 + + description = Rf"\({sp.latex(symbol)}\)" + if symbol.is_integer: + return w.IntSlider(description=description, **kwargs) + return w.FloatSlider(description=description, **kwargs) + + +def _assert_ipywidgets_installed() -> None: + try: + import ipywidgets # noqa: F401, PLC0415 + except ImportError as exc: + msg = "Please install ipywidgets to use the ampform.sympy.slider module" + raise ImportError(msg) from exc + + +def substitute_indexed_symbols(expression: sp.Expr) -> sp.Expr: + """Substitute `~sympy.tensor.indexed.IndexedBase` with symbols. + + See :doc:`compwa-report:008/index` for more info. + """ + return expression.xreplace({ + s: _indexed_to_symbol(s) + for s in expression.free_symbols + if isinstance(s, sp.Indexed) + }) + + +def _indexed_to_symbol(idx: sp.Indexed) -> sp.Symbol: + base_name, _, _ = str(idx).rpartition("[") + subscript = ",".join(map(str, idx.indices)) + if len(idx.indices) > 1: + base_name = translate(base_name) + subscript = "_{" + subscript + "}" + return sp.Symbol(f"{base_name}{subscript}", **idx.assumptions0) diff --git a/src/symplot/__init__.py b/src/symplot/__init__.py deleted file mode 100644 index b6bb08fa..00000000 --- a/src/symplot/__init__.py +++ /dev/null @@ -1,367 +0,0 @@ -"""Create interactive plots for `sympy` expressions. - -The procedure to create interactive plots with for :mod:`sympy` expressions with -:doc:`mpl-interactions ` has been extracted to this module. - -The module is only available here, under the documentation. If this feature turns out to -be popular, it can be published as an independent package. - -The package also provides other helpful functions, like -:func:`substitute_indexed_symbols`, that are useful when visualizing `sympy` -expressions. -""" - -from __future__ import annotations - -import inspect -import logging -from collections import abc -from typing import TYPE_CHECKING, TypeAlias, TypeVar - -import sympy as sp -from ipywidgets.widgets import FloatSlider, IntSlider -from sympy.printing.latex import translate - -from ampform.sympy import ( - partial_doit, # noqa: F401 # pyright: ignore[reportUnusedImport] -) - -if TYPE_CHECKING: # pragma: no cover - from collections.abc import Callable, Iterator, Mapping, Sequence - from typing import TypeGuard - - from IPython.lib.pretty import PrettyPrinter - -_LOGGER = logging.getLogger(__name__) - -Slider: TypeAlias = FloatSlider | IntSlider -"""Allowed :doc:`ipywidgets ` slider types.""" -RangeDefinition = tuple[float, float] | tuple[float, float, float | int] -"""Types of range definitions used in :meth:`.set_ranges`.""" - - -class SliderKwargs(abc.Mapping): - """Wrapper around a `dict` of sliders that can serve as keyword arguments. - - Sliders can be defined in :func:`~mpl_interactions.pyplot.interactive_plot` through - :term:`kwargs `. This wrapper class can be used for that. - - .. automethod:: __getitem__ - """ - - def __init__( - self, - sliders: Mapping[str, Slider], - arg_to_symbol: Mapping[str, str], - ) -> None: - self._verify_arguments(sliders, arg_to_symbol) - self._sliders = dict(sliders) - self._arg_to_symbol = { - arg: symbol - for arg, symbol in arg_to_symbol.items() - if symbol in self._sliders - } - - @property - def arg_to_symbol(self) -> dict[str, str]: - """**Copy** of the internal translation `dict` for argument names.""" - return dict(self._arg_to_symbol) - - @property - def symbol_to_arg(self) -> dict[str, str]: - """Inverted `dict` of `arg_to_symbol`.""" - return {symbol: arg for arg, symbol in self._arg_to_symbol.items()} - - @staticmethod - def _verify_arguments( - sliders: Mapping[str, Slider], arg_to_symbol: Mapping[str, str] - ) -> None: - symbol_names = set(arg_to_symbol.values()) - for arg_name in arg_to_symbol: - if not arg_name.isidentifier(): - msg = ( - f'Argument "{arg_name}" in arg_to_symbol is not a valid identifier' - " for a Python variable" - ) - raise ValueError(msg) - for slider_name in sliders: - if not isinstance(slider_name, str): - msg = f'Slider name "{slider_name}" is not of type str' - raise TypeError(msg) - if slider_name not in symbol_names: - msg = ( - f'Slider with name "{slider_name}" is not covered by arg_to_symbol' - ) - raise ValueError(msg) - for name, slider in sliders.items(): - if not isinstance(slider, Slider.__args__): # type: ignore[attr-defined] - msg = f'Slider "{name}" is not a valid ipywidgets slider' - raise TypeError(msg) - - def __getitem__(self, key: str | sp.Symbol) -> Slider: - """Get slider by symbol, symbol name, or argument name.""" - if isinstance(key, sp.Symbol): - key = key.name - slider_name = self._arg_to_symbol.get(key, key) - if slider_name not in self._sliders: - msg = f'"{key}" is neither an argument nor a symbol name' - raise KeyError(msg) - return self._sliders[slider_name] - - def __iter__(self) -> Iterator[str]: - """Iterate over the arguments of the `.LambdifiedExpression`. - - This is useful for unpacking an instance of `SliderKwargs` as :term:`kwargs - `. - """ - return self._arg_to_symbol.__iter__() - - def __len__(self) -> int: - return len(self._sliders) - - def __repr__(self) -> str: - return ( - f"{type(self).__name__}(" - f"sliders={self._sliders}, " - f"arg_to_symbol={self._arg_to_symbol})" - ) - - def _repr_pretty_(self, p: PrettyPrinter, cycle: bool) -> None: - class_name = type(self).__name__ - if cycle: - p.text(f"{class_name}(...)") - else: - with p.group(indent=2, open=f"{class_name}("): - p.breakable() - p.text("sliders=") - p.pretty(self._sliders) # type: ignore[attr-defined] - p.text(",") - p.breakable() - p.text("arg_to_symbol=") - p.pretty(self._arg_to_symbol) # type: ignore[attr-defined] - p.text(",") - p.breakable() - p.text(")") - - def set_values(self, *args: dict[str, float], **kwargs: float) -> None: - """Set initial values for the sliders. - - Either use a `dict` as input, or use :term:`kwargs ` - with slider names as the keywords (see `.SliderKwargs.__getitem__`). This façade - method exists in particular for `.parameter_defaults`. - """ - value_mapping = _merge_args_kwargs(*args, **kwargs) - for keyword, value in value_mapping.items(): - try: - self[keyword].value = value - except KeyError: # noqa: PERF203 - _LOGGER.warning(f'There is no slider with name or symbol "{keyword}"') - continue - - def set_ranges( - self, *args: dict[str, RangeDefinition], **kwargs: RangeDefinition - ) -> None: - """Set min, max and (optionally) the nr of steps for each slider. - - .. tip:: :code:`n_steps` becomes the step **size** if its value is `float`. - """ - range_definitions = _merge_args_kwargs(*args, **kwargs) - for slider_name, range_def in range_definitions.items(): - if not isinstance(range_def, tuple): - msg = f'Range definition for slider "{slider_name}" is not a tuple' - raise TypeError(msg) - slider = self[slider_name] - if _is_min_max(range_def): - min_, max_ = range_def - step_size = slider.step - elif _is_min_max_step(range_def): - min_, max_, n_steps = range_def - if n_steps <= 0: - msg = "Number of steps has to be positive" - raise ValueError(msg) - if isinstance(n_steps, float): - step_size = n_steps - else: - step_size = (max_ - min_) / n_steps - else: - msg = ( - f'Range definition {range_def} for slider "{slider_name}" is' - " neither of shape (min, max) nor (min, max, n_steps)" - ) - raise ValueError(msg) - if min_ > slider.max: - slider.max = max_ - slider.min = min_ - else: - slider.min = min_ - slider.max = max_ - if isinstance(slider, FloatSlider): - slider.step = step_size - - -def _is_min_max( - range_def: RangeDefinition, -) -> TypeGuard[tuple[float, float]]: - return len(range_def) == 2 # noqa: PLR2004 - - -def _is_min_max_step( - range_def: RangeDefinition, -) -> TypeGuard[tuple[float, float, float]]: - return len(range_def) == 3 # noqa: PLR2004 - - -ValueType = TypeVar("ValueType") - - -def _merge_args_kwargs( - *args: dict[str, ValueType], **kwargs: ValueType -) -> dict[str, ValueType]: - r"""Merge positional `dict` arguments and keyword arguments into one `dict`. - - >>> _merge_args_kwargs(x="X", y="Y") - {'x': 'X', 'y': 'Y'} - >>> _merge_args_kwargs({R"\theta": 0}, a=1, b=2) - {'\\theta': 0, 'a': 1, 'b': 2} - """ - output_dict = {} - for arg in args: - if not isinstance(arg, abc.Mapping): - msg = "Positional arguments have to be of type dict" - raise TypeError(msg) - output_dict.update(arg) - output_dict.update(kwargs) - return output_dict - - -def prepare_sliders( - expression: sp.Expr, plot_symbol: sp.Symbol | tuple[sp.Symbol, ...] -) -> tuple[Callable, SliderKwargs]: - # cspell:ignore lambdifygenerated - """Lambdify a `sympy` expression and create sliders for its arguments. - - >>> n = sp.Symbol("n", integer=True) - >>> x = sp.Symbol("x") - >>> expression, sliders = prepare_sliders(x**n, plot_symbol=x) - >>> expression - - >>> sliders - SliderKwargs(...) - """ - plot_symbols = __safe_wrap_symbols(plot_symbol) - slider_symbols = _extract_slider_symbols(expression, plot_symbols) - lambdified_expression = sp.lambdify( - (*plot_symbols, *slider_symbols), - expression, - modules="numpy", - ) - sliders_mapping = {symbol.name: create_slider(symbol) for symbol in slider_symbols} - symbols_names = (s.name for s in (*plot_symbols, *slider_symbols)) - arg_names = inspect.signature(lambdified_expression).parameters - arg_to_symbol = dict(zip(arg_names, symbols_names, strict=True)) - sliders = SliderKwargs(sliders_mapping, arg_to_symbol) - return lambdified_expression, sliders - - -def create_slider(symbol: sp.Symbol) -> Slider: - r"""Create an `int` or `float` slider, depending on Symbol assumptions. - - The description for the slider is rendered as LaTeX from the - `~sympy.core.symbol.Symbol` name. - - >>> create_slider(sp.Symbol("a")) - FloatSlider(value=0.0, description='\\(a\\)') - >>> create_slider(sp.Symbol("n0", integer=True)) - IntSlider(value=0, description='\\(n_{0}\\)') - """ - description = Rf"\({sp.latex(symbol)}\)" - if symbol.is_integer: # type: ignore[attr-defined] - return IntSlider(description=description) - return FloatSlider(description=description) - - -def _extract_slider_symbols( - expression: sp.Expr, - plot_symbol: sp.Symbol | Sequence[sp.Symbol], -) -> tuple[sp.Symbol, ...]: - """Extract sorted, remaining free symbols of a `sympy` expression.""" - plot_symbols = __safe_wrap_symbols(plot_symbol) - free_symbols: set[sp.Symbol] = expression.free_symbols # type: ignore[assignment] - for symbol in plot_symbols: - if symbol not in free_symbols: - msg = f"Expression does not contain a free symbol named {symbol}" - raise ValueError(msg) - free_symbols.remove(symbol) - ordered_symbols = sorted(free_symbols, key=lambda s: s.name) - return tuple(ordered_symbols) - - -def __safe_wrap_symbols( - plot_symbol: sp.Symbol | Sequence[sp.Symbol], -) -> tuple[sp.Symbol, ...]: - if isinstance(plot_symbol, abc.Sequence): - return tuple(plot_symbol) - if isinstance(plot_symbol, sp.Symbol): - return (plot_symbol,) - msg = f"Wrong plot_symbol input type {type(plot_symbol).__name__}" - raise TypeError(msg) - - -def _indexed_to_symbol(idx: sp.Indexed) -> sp.Symbol: - base_name, _, _ = str(idx).rpartition("[") - subscript = ",".join(map(str, idx.indices)) - if len(idx.indices) > 1: - base_name = translate(base_name) - subscript = "_{" + subscript + "}" - return sp.Symbol(f"{base_name}{subscript}", **idx.assumptions0) - - -def rename_symbols( - expression: sp.Expr, renames: Callable[[str], str] | dict[str, str] -) -> sp.Expr: - r"""Rename symbols in an expression. - - >>> a, b, x = sp.symbols(R"a \beta x") - >>> expr = a + b * x - >>> rename_symbols(expr, renames={"a": "A", R"\beta": "B"}) - A + B*x - >>> rename_symbols(expr, renames=lambda s: s.replace("\\", "")) - a + beta*x - >>> rename_symbols(expr, renames={"non-existent": "c"}) - Traceback (most recent call last): - ... - KeyError: "No symbol with name 'non-existent' in expression" - """ - substitutions: dict[sp.Symbol, sp.Symbol] = {} - free_symbols: set[sp.Symbol] = expression.free_symbols # type: ignore[assignment] - if callable(renames): - for old_symbol in free_symbols: - new_name = renames(old_symbol.name) - new_symbol = sp.Symbol(new_name, **old_symbol.assumptions0) - substitutions[old_symbol] = new_symbol - elif isinstance(renames, dict): - for old_name, new_name in renames.items(): - matches = (s for s in free_symbols if s.name == old_name) - try: - old_symbol = next(matches) - except StopIteration as e: - msg = f"No symbol with name '{old_name}' in expression" - raise KeyError(msg) from e - new_symbol = sp.Symbol(new_name, **old_symbol.assumptions0) - substitutions[old_symbol] = new_symbol - else: - msg = f"Cannot rename from type {type(renames).__name__}" - raise TypeError(msg) - return expression.xreplace(substitutions) - - -def substitute_indexed_symbols(expression: sp.Expr) -> sp.Expr: - """Substitute `~sympy.tensor.indexed.IndexedBase` with symbols. - - See :doc:`compwa-report:008/index` for more info. - """ - return expression.xreplace({ - s: _indexed_to_symbol(s) - for s in expression.free_symbols - if isinstance(s, sp.Indexed) - }) diff --git a/src/symplot/py.typed b/src/symplot/py.typed deleted file mode 100644 index e69de29b..00000000 diff --git a/tests/__init__.py b/tests/__init__.py deleted file mode 100644 index 948df262..00000000 --- a/tests/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Required to set mypy options for the tests folder.""" diff --git a/tests/dynamics/__init__.py b/tests/dynamics/__init__.py deleted file mode 100644 index 948df262..00000000 --- a/tests/dynamics/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Required to set mypy options for the tests folder.""" diff --git a/tests/dynamics/test_builder.py b/tests/dynamics/test_builder.py index a12a4f73..a7a717af 100644 --- a/tests/dynamics/test_builder.py +++ b/tests/dynamics/test_builder.py @@ -29,7 +29,7 @@ def variable_set(self) -> TwoBodyKinematicVariableSet: outgoing_state_mass2=sp.Symbol("m2"), helicity_phi=sp.Symbol("phi"), helicity_theta=sp.Symbol("theta"), - angular_momentum=sp.Symbol("L", integer=True, negative=False), # type: ignore[arg-type] + angular_momentum=sp.Symbol("L", integer=True, negative=False), ) def test_simple_breit_wigner( diff --git a/tests/dynamics/test_deprecated.py b/tests/dynamics/test_deprecated.py index 3bc2c364..e61f8bf6 100644 --- a/tests/dynamics/test_deprecated.py +++ b/tests/dynamics/test_deprecated.py @@ -19,7 +19,7 @@ def test_pickle(): assert expr == imported_expr # Pickle UnevaluatedExpression - expr = UnevaluatedExpression() # type: ignore[abstract] + expr = UnevaluatedExpression() pickled_obj = pickle.dumps(expr) imported_expr = pickle.loads(pickled_obj) # noqa: S301 assert expr == imported_expr @@ -38,7 +38,7 @@ def test_pickle(): m_b=m_a, angular_momentum=0, meson_radius=1, - phsp_factor=EqualMassPhaseSpaceFactor, # type:ignore[arg-type] + phsp_factor=EqualMassPhaseSpaceFactor, name="Gamma_1", ) pickled_obj = pickle.dumps(expr) diff --git a/tests/dynamics/test_dynamics.py b/tests/dynamics/test_dynamics.py index d0c300a1..f38db61a 100644 --- a/tests/dynamics/test_dynamics.py +++ b/tests/dynamics/test_dynamics.py @@ -48,7 +48,7 @@ def test_init(): m_b=m2, angular_momentum=angular_momentum, meson_radius=d, - phsp_factor=EqualMassPhaseSpaceFactor, # type:ignore[arg-type] + phsp_factor=EqualMassPhaseSpaceFactor, name="Gamma_1", ) assert width.phsp_factor is EqualMassPhaseSpaceFactor @@ -71,7 +71,7 @@ def test_doit_and_subs(self, method: str): m_b=m_a, angular_momentum=0, meson_radius=1, - phsp_factor=PhaseSpaceFactorSWave, # type:ignore[arg-type] + phsp_factor=PhaseSpaceFactorSWave, ) subs_first = round_nested(_subs(width, parameters, method).doit(), n_decimals=3) doit_first = round_nested(_subs(width.doit(), parameters, method), n_decimals=3) @@ -104,7 +104,7 @@ def test_generate( assert len(total_intensity.free_symbols) == 5 angle_value = 0 - free_symbols: set[sp.Symbol] = total_intensity.free_symbols # type: ignore[assignment] + free_symbols: set[sp.Symbol] = total_intensity.free_symbols angle_substitutions = { s: angle_value for s in free_symbols diff --git a/tests/dynamics/test_kmatrix.py b/tests/dynamics/test_kmatrix.py index bd37c3ba..b21130e0 100644 --- a/tests/dynamics/test_kmatrix.py +++ b/tests/dynamics/test_kmatrix.py @@ -1,12 +1,14 @@ from __future__ import annotations import re +from typing import cast import pytest import sympy as sp from ampform.dynamics.kmatrix import NonRelativisticKMatrix -from symplot import rename_symbols, substitute_indexed_symbols +from ampform.sympy import rename_symbols +from ampform.sympy.slider import substitute_indexed_symbols class TestNonRelativisticKMatrix: @@ -39,7 +41,7 @@ def test_interference_single_channel(self): def _remove_residue_constants(expression: sp.Expr) -> sp.Expr: - free_symbols: set[sp.Symbol] = expression.free_symbols # type: ignore[assignment] + free_symbols = cast("set[sp.Symbol]", expression.free_symbols) residue_constants = filter(lambda s: s.name.startswith(R"\gamma_"), free_symbols) return expression.xreplace(dict.fromkeys(residue_constants, 1)) diff --git a/tests/external/__init__.py b/tests/external/__init__.py deleted file mode 100644 index 948df262..00000000 --- a/tests/external/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Required to set mypy options for the tests folder.""" diff --git a/tests/external/test_sympy.py b/tests/external/test_sympy.py index 21f60979..246bd3a3 100644 --- a/tests/external/test_sympy.py +++ b/tests/external/test_sympy.py @@ -35,7 +35,7 @@ def test_name(self): assert x.name == "x; weird-spacing .," # cspell:ignore srepr assert sp.srepr(x) == "Symbol('x; weird-spacing\\t.,')" - assert f.name == " f.^" + assert f.name == " f.^" # ty:ignore[unresolved-attribute] assert g.name == "g" x.name = "x" assert x.name == "x" diff --git a/tests/helicity/__init__.py b/tests/helicity/__init__.py deleted file mode 100644 index 948df262..00000000 --- a/tests/helicity/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Required to set mypy options for the tests folder.""" diff --git a/tests/helicity/align/__init__.py b/tests/helicity/align/__init__.py deleted file mode 100644 index 948df262..00000000 --- a/tests/helicity/align/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Required to set mypy options for the tests folder.""" diff --git a/tests/helicity/test_angular_distributions.py b/tests/helicity/test_angular_distributions.py index 5bcbbce9..e8350acd 100644 --- a/tests/helicity/test_angular_distributions.py +++ b/tests/helicity/test_angular_distributions.py @@ -1,6 +1,6 @@ from __future__ import annotations -from typing import TYPE_CHECKING +from typing import TYPE_CHECKING, cast import pytest import qrules @@ -73,7 +73,8 @@ def sympy_model(self, particle_database: ParticleCollection) -> sp.Expr: amplitude_model = get_builder(reaction).formulate() full_model = sp.simplify( - amplitude_model.expression.subs(amplitude_model.parameter_defaults) + amplitude_model.expression + .subs(amplitude_model.parameter_defaults) .doit() .expand(complex=True) ) @@ -113,7 +114,7 @@ def test_angular_distributions( expected_distribution_function: sp.Expr, sympy_model: sp.Expr, ) -> None: - free_symbols: set[sp.Symbol] = sympy_model.free_symbols # type: ignore[assignment] + free_symbols = cast("set[sp.Symbol]", sympy_model.free_symbols) assert {s.name for s in free_symbols} == { "phi_0^02", "theta_02", @@ -167,7 +168,8 @@ def sympy_model(self) -> sp.Expr: amplitude_model.parameter_defaults[coefficient] = 0.5 full_model = sp.simplify( - amplitude_model.expression.subs(amplitude_model.parameter_defaults) + amplitude_model.expression + .subs(amplitude_model.parameter_defaults) .doit() .expand(complex=True) ) @@ -198,7 +200,7 @@ def test_angular_distributions( expected_distribution_function: sp.Expr, sympy_model: sp.Expr, ) -> None: - free_symbols: set[sp.Symbol] = sympy_model.free_symbols # type: ignore[assignment] + free_symbols = cast("set[sp.Symbol]", sympy_model.free_symbols) assert {s.name for s in free_symbols} == { "phi_0^02", "theta_02", diff --git a/tests/helicity/test_helicity.py b/tests/helicity/test_helicity.py index 9865c102..5eee587f 100644 --- a/tests/helicity/test_helicity.py +++ b/tests/helicity/test_helicity.py @@ -100,7 +100,7 @@ def test_formulate( def test_stable_final_state_ids(self, reaction: ReactionInfo): builder: HelicityAmplitudeBuilder = get_builder(reaction) assert builder.config.stable_final_state_ids is None - builder.config.stable_final_state_ids = (1, 2) # type: ignore[assignment] + builder.config.stable_final_state_ids = (1, 2) # ty:ignore[invalid-assignment] assert builder.config.stable_final_state_ids == {1, 2} def test_scalar_initial_state(self, reaction: ReactionInfo): @@ -130,14 +130,10 @@ def test_use_helicity_couplings(self, reaction: ReactionInfo): if reaction.formalism == "canonical-helicity": assert len(coefficient_names) == 4 assert coefficient_names == { - R"C_{J/\psi(1S) \xrightarrow[S=1]{L=0} f_{0}(980) \gamma;" - R" f_{0}(980) \xrightarrow[S=0]{L=0} \pi^{0} \pi^{0}}", - R"C_{J/\psi(1S) \xrightarrow[S=1]{L=2} f_{0}(1500) \gamma;" - R" f_{0}(1500) \xrightarrow[S=0]{L=0} \pi^{0} \pi^{0}}", - R"C_{J/\psi(1S) \xrightarrow[S=1]{L=0} f_{0}(1500) \gamma;" - R" f_{0}(1500) \xrightarrow[S=0]{L=0} \pi^{0} \pi^{0}}", - R"C_{J/\psi(1S) \xrightarrow[S=1]{L=2} f_{0}(980) \gamma;" - R" f_{0}(980) \xrightarrow[S=0]{L=0} \pi^{0} \pi^{0}}", + R"C_{J/\psi(1S) \xrightarrow[S=1]{L=0} f_{0}(980) \gamma; f_{0}(980) \xrightarrow[S=0]{L=0} \pi^{0} \pi^{0}}", + R"C_{J/\psi(1S) \xrightarrow[S=1]{L=2} f_{0}(1500) \gamma; f_{0}(1500) \xrightarrow[S=0]{L=0} \pi^{0} \pi^{0}}", + R"C_{J/\psi(1S) \xrightarrow[S=1]{L=0} f_{0}(1500) \gamma; f_{0}(1500) \xrightarrow[S=0]{L=0} \pi^{0} \pi^{0}}", + R"C_{J/\psi(1S) \xrightarrow[S=1]{L=2} f_{0}(980) \gamma; f_{0}(980) \xrightarrow[S=0]{L=0} \pi^{0} \pi^{0}}", } assert len(coupling_names) == 6 assert coupling_names == { @@ -151,10 +147,8 @@ def test_use_helicity_couplings(self, reaction: ReactionInfo): else: assert len(coefficient_names) == 2 assert coefficient_names == { - R"C_{J/\psi(1S) \to {f_{0}(980)}_{0} \gamma_{+1}; f_{0}(980)" - R" \to \pi^{0}_{0} \pi^{0}_{0}}", - R"C_{J/\psi(1S) \to {f_{0}(1500)}_{0} \gamma_{+1};" - R" f_{0}(1500) \to \pi^{0}_{0} \pi^{0}_{0}}", + R"C_{J/\psi(1S) \to {f_{0}(980)}_{0} \gamma_{+1}; f_{0}(980) \to \pi^{0}_{0} \pi^{0}_{0}}", + R"C_{J/\psi(1S) \to {f_{0}(1500)}_{0} \gamma_{+1}; f_{0}(1500) \to \pi^{0}_{0} \pi^{0}_{0}}", } assert len(coupling_names) == 6 assert coupling_names == { @@ -174,7 +168,7 @@ def test_parameter_defaults_item_types( _, model = amplitude_model for symbol, value in model.parameter_defaults.items(): assert isinstance(symbol, sp.Symbol) - assert isinstance(value, ParameterValue.__args__) # type: ignore[attr-defined] + assert isinstance(value, ParameterValue.__args__) def test_rename_symbols_no_renames( self, amplitude_model: tuple[str, HelicityModel] @@ -303,7 +297,7 @@ class TestParameterValues: def test_subs_xreplace(self, subs_method: str): base = sp.IndexedBase("b") a, x, y = sp.symbols("a x y") - b: sp.Indexed = base[1, 2] # pyright:ignore[reportIndexIssue] + b: sp.Indexed = base[1, 2] expr: sp.Expr = a * x + b * y parameters = ParameterValues({a: 2, b: -3}) if subs_method == "subs": @@ -379,7 +373,7 @@ def test_symmetrization(d_to_pi_pi_pi: ReactionInfo): for name in reaction.get_intermediate_particles().names: model_builder.dynamics.assign(name, bw_builder) model = model_builder.formulate() - parameter_names = sorted(s.name for s in model.parameter_defaults) + parameter_names = sorted(s.name for s in model.parameter_defaults) # ty:ignore[unresolved-attribute] assert parameter_names == [ R"C_{D^{+} \to \pi^{+}_{0} \rho(770)^{0}_{0}; \rho(770)^{0} \to \pi^{+}_{0} \pi^{-}_{0}}", R"\Gamma_{\rho(770)^{0}}", @@ -390,7 +384,7 @@ def test_symmetrization(d_to_pi_pi_pi: ReactionInfo): assert len(model.amplitudes) == 1 (amplitude_expr,) = model.amplitudes.values() amplitude_expr = amplitude_expr.xreplace({ - s: sp.Symbol(s.name.split("_", maxsplit=1)[0].strip("\\").replace("Gamma", "Γ")) + s: sp.Symbol(s.name.split("_", maxsplit=1)[0].strip("\\").replace("Gamma", "Γ")) # ty:ignore[unresolved-attribute] for s in model.parameter_defaults }) amplitude_expr = sp.simplify(amplitude_expr, doit=False) diff --git a/tests/io/__init__.py b/tests/io/__init__.py deleted file mode 100644 index ee577dff..00000000 --- a/tests/io/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Required to set mypy options for the tests folder.""" # noqa: A005 diff --git a/tests/kinematics/test_angles.py b/tests/kinematics/test_angles.py index 67456211..4a75767b 100644 --- a/tests/kinematics/test_angles.py +++ b/tests/kinematics/test_angles.py @@ -1,6 +1,6 @@ from __future__ import annotations -from typing import TYPE_CHECKING +from typing import TYPE_CHECKING, cast import numpy as np import pytest @@ -24,9 +24,9 @@ from qrules.topology import Topology m0, m1, m2, m3 = sp.symbols("m_:4", nonnegative=True) -s1: sp.Pow = sp.Symbol("m_23", nonnegative=True) ** 2 # type: ignore[assignment] -s2: sp.Pow = sp.Symbol("m_13", nonnegative=True) ** 2 # type: ignore[assignment] -s3: sp.Pow = sp.Symbol("m_12", nonnegative=True) ** 2 # type: ignore[assignment] +s1 = cast("sp.Pow", sp.Symbol("m_23", nonnegative=True) ** 2) +s2 = cast("sp.Pow", sp.Symbol("m_13", nonnegative=True) ** 2) +s3 = cast("sp.Pow", sp.Symbol("m_12", nonnegative=True) ** 2) @pytest.fixture(scope="session") diff --git a/tests/kinematics/test_lorentz.py b/tests/kinematics/test_lorentz.py index 19a6d440..e494538e 100644 --- a/tests/kinematics/test_lorentz.py +++ b/tests/kinematics/test_lorentz.py @@ -416,7 +416,7 @@ def test_compute_invariant_masses( np_expr = sp.lambdify(momentum_symbols.values(), expr.doit(), cse=True) computed = np.average(np_expr(*momentum_values)) indices = map(int, mass_name[2:]) - masses = __compute_mass(sum(data_sample[i] for i in indices)) # type: ignore[arg-type] + masses = __compute_mass(sum(data_sample[i] for i in indices)) expected = np.average(masses) assert pytest.approx(computed, abs=1e-8) == expected diff --git a/tests/symplot/__init__.py b/tests/symplot/__init__.py deleted file mode 100644 index 948df262..00000000 --- a/tests/symplot/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Required to set mypy options for the tests folder.""" diff --git a/tests/symplot/test_ipywidgets.py b/tests/symplot/test_ipywidgets.py deleted file mode 100644 index 8d93113b..00000000 --- a/tests/symplot/test_ipywidgets.py +++ /dev/null @@ -1,25 +0,0 @@ -"""Behavior tests of `ipywidgets`.""" - -import os - -import pytest -from ipywidgets.widgets import FloatSlider - - -@pytest.mark.skipif("GITHUB_ACTION" in os.environ, reason="ipywidgets instable") -class TestFloatSlider: - def test_continuous_update(self) -> None: - slider = FloatSlider() - assert slider.continuous_update is True - slider.continuous_update = False - assert slider.continuous_update is False - - def test_step(self) -> None: - slider = FloatSlider(min=5, max=7) - assert slider.step == 0.1 - slider.min = 6 - assert slider.step == 0.1 - - def test_value(self) -> None: - slider = FloatSlider(min=5, max=7, step=0.1) - assert slider.value == slider.min diff --git a/tests/symplot/test_symplot.py b/tests/symplot/test_symplot.py deleted file mode 100644 index 41974d53..00000000 --- a/tests/symplot/test_symplot.py +++ /dev/null @@ -1,208 +0,0 @@ -from __future__ import annotations - -import logging -from copy import deepcopy -from typing import TYPE_CHECKING, Any, no_type_check - -import pytest -import sympy as sp -from IPython.lib.pretty import pretty -from ipywidgets.widgets.widget_float import FloatSlider -from ipywidgets.widgets.widget_int import IntSlider - -from symplot import RangeDefinition, Slider, SliderKwargs - -if TYPE_CHECKING: - from collections.abc import Callable - from re import Pattern - - -class TestSliderKwargs: - @pytest.fixture() - def slider_kwargs(self) -> SliderKwargs: - return SliderKwargs( - sliders={ - "n": IntSlider(value=2, min=0, max=5, description="$n$"), - "alpha": FloatSlider( - value=0.3, min=0.0, max=2.5, description=R"$\alpha$" - ), - R"\theta_12": FloatSlider( - value=1.5, min=0.0, max=3.12, description=R"$\theta_{12}$" - ), - }, - arg_to_symbol={ - "n": "n", - "alpha": "alpha", - "Dummy": R"\theta_12", - }, - ) - - def test_getitem(self, slider_kwargs: SliderKwargs) -> None: - n_slider = slider_kwargs["n"] - assert isinstance(n_slider, IntSlider) - assert n_slider.description == "$n$" - assert slider_kwargs[sp.Symbol("n")] == n_slider - - alpha_slider = slider_kwargs.get("alpha") - assert alpha_slider is not None - assert isinstance(alpha_slider, FloatSlider) - assert alpha_slider.value == 0.3 - assert alpha_slider.description == R"$\alpha$" - - theta_slider = slider_kwargs[sp.Symbol(R"\theta_12", real=True)] - assert theta_slider is not None - assert isinstance(theta_slider, FloatSlider) - assert theta_slider.max == 3.12 - assert theta_slider.description == R"$\theta_{12}$" - assert slider_kwargs["Dummy"] == theta_slider - - error_message_pattern = r"is neither an argument nor a symbol name" - with pytest.raises(KeyError, match=error_message_pattern): - assert slider_kwargs["non-existent"] - with pytest.raises(KeyError, match=error_message_pattern): - assert slider_kwargs[sp.Symbol("Gamma")] - - def test_iter(self, slider_kwargs: SliderKwargs) -> None: - assert set(slider_kwargs) == {"Dummy", "alpha", "n"} - - def test_kwargs(self, slider_kwargs: SliderKwargs) -> None: - def some_function(**kwargs: Slider) -> None: - assert set(kwargs) == {"Dummy", "alpha", "n"} - assert isinstance(kwargs["alpha"], FloatSlider) - assert isinstance(kwargs["n"], IntSlider) - assert kwargs["Dummy"].max == 3.12 - - some_function(**slider_kwargs) - - def test_len(self, slider_kwargs: SliderKwargs) -> None: - assert len(slider_kwargs) == 3 - - @pytest.mark.parametrize("repr_function", [repr, pretty]) - def test_repr( - self, repr_function: Callable[[Any], str], slider_kwargs: SliderKwargs - ) -> None: - from_repr: SliderKwargs = eval(repr_function(slider_kwargs)) - assert set(from_repr) == set(slider_kwargs) - for slider_name in slider_kwargs: - slider = slider_kwargs[slider_name] - slider_from_repr = from_repr[slider_name] - assert slider.description == slider_from_repr.description - assert slider.min == slider_from_repr.min - assert slider.max == slider_from_repr.max - assert slider.value == slider_from_repr.value - - @pytest.mark.skip(reason="ipywidgets cannot be copied anymore") - @pytest.mark.parametrize( - ("slider_name", "min_", "max_", "n_steps", "step_size"), - [ - ("n", 10, 20, None, 1), - ("n", 10, 20, 20, 1), - ("alpha", -1.5, 0.7, None, 0.1), - ("alpha", 8, 10, 4, 0.5), - ("alpha", 8, 10, 0.5, 0.5), - ], - ) - def test_set_ranges( - self, - slider_name: str, - min_: float, - max_: float, - n_steps: float | None, - step_size: float, - slider_kwargs: SliderKwargs, - ) -> None: - if n_steps is None: - range_def: RangeDefinition = (min_, max_) - else: - range_def = (min_, max_, n_steps) - - sliders = deepcopy(slider_kwargs) - sliders.set_ranges({slider_name: range_def}) - slider = sliders[slider_name] - assert slider.min == min_ - assert slider.max == max_ - assert slider.step == step_size - - @no_type_check - def test_set_ranges_exceptions(self, slider_kwargs: SliderKwargs) -> None: - with pytest.raises(TypeError, match=r"not a tuple"): - slider_kwargs.set_ranges({"n": {"min": 0, "max": 1}}) - with pytest.raises( - ValueError, match=r"shape \(min, max\) nor \(min, max, n_steps\)" - ): - slider_kwargs.set_ranges({"n": (1,)}) - with pytest.raises( - ValueError, match=r"shape \(min, max\) nor \(min, max, n_steps\)" - ): - slider_kwargs.set_ranges({"alpha": (0.0, 0.1, 100, 200)}) - with pytest.raises(ValueError, match=r"Number of steps has to be positive"): - slider_kwargs.set_ranges({"n": (0, 10, -1)}) - - @pytest.mark.skip(reason="ipywidgets cannot be copied anymore") - def test_set_values( - self, slider_kwargs: SliderKwargs, caplog: pytest.LogCaptureFixture - ) -> None: - sliders = deepcopy(slider_kwargs) - assert sliders["n"].value == 2 - assert sliders["alpha"].value == 0.3 - assert sliders["Dummy"].value == 1.5 - - # Using identifiers as kwargs - with caplog.at_level(logging.WARNING): - sliders.set_values(non_existent=0) - sliders.set_values(n=1, Dummy=2) - assert sliders["n"].value == 1 - assert sliders["Dummy"].value == 2 - - # Using a symbol mapping - n, alpha, theta = sp.symbols(R"n, alpha, \theta_12") - sliders.set_values({n: 5, alpha: 2.1, theta: 1.57}) - assert sliders["n"].value == 5 - assert sliders["alpha"].value == 2.1 - assert sliders["Dummy"].value == 1.57 - - @no_type_check - def test_set_values_exceptions(self, slider_kwargs: SliderKwargs) -> None: - with pytest.raises( - TypeError, match="Positional arguments have to be of type dict" - ): - slider_kwargs.set_values(0) - - @pytest.mark.parametrize( - ("sliders", "arg_to_symbol", "exception", "match"), - [ - ( - {"b": FloatSlider()}, - {R"\alpha": "b"}, - ValueError, - r'"\\alpha" in arg_to_symbol is not a valid identifier', - ), - ( - {sp.Symbol("b"): FloatSlider()}, - {"b": sp.Symbol("b")}, - TypeError, - r'Slider name "b" is not of type str', - ), - ( - {R"\alpha": FloatSlider()}, - {"Dummy": "not a symbol"}, - ValueError, - r'Slider with name "\\alpha" is not covered by arg_to_symbol', - ), - ( - {"one": None}, - {"one": "one"}, - TypeError, - r"is not a valid ipywidgets slider", - ), - ], - ) - def test_verify_arguments( - self, - sliders: dict[str, FloatSlider], - arg_to_symbol: dict[str, str], - exception: type[ValueError], - match: Pattern[str], - ) -> None: - with pytest.raises(exception, match=match): - SliderKwargs._verify_arguments(sliders, arg_to_symbol) diff --git a/tests/sympy/__init__.py b/tests/sympy/__init__.py deleted file mode 100644 index 948df262..00000000 --- a/tests/sympy/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Required to set mypy options for the tests folder.""" diff --git a/tests/sympy/decorator/__init__.py b/tests/sympy/decorator/__init__.py deleted file mode 100644 index 948df262..00000000 --- a/tests/sympy/decorator/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Required to set mypy options for the tests folder.""" diff --git a/tests/sympy/decorator/test_helpers.py b/tests/sympy/decorator/test_helpers.py index 576fb6f1..d73ab210 100644 --- a/tests/sympy/decorator/test_helpers.py +++ b/tests/sympy/decorator/test_helpers.py @@ -20,13 +20,13 @@ def test_check_has_implementation(): with pytest.raises(ValueError, match=r"must have an evaluate\(\) method"): @_check_has_implementation - class MyExpr1: # pyright: ignore[reportUnusedClass] + class MyExpr1: pass with pytest.raises(TypeError, match=r"evaluate\(\) must be a callable method"): @_check_has_implementation - class MyExpr2: # pyright: ignore[reportUnusedClass] + class MyExpr2: evaluate = "test" @@ -53,9 +53,9 @@ class MyExpr(sp.Expr): with pytest.raises( ValueError, match=r"^Expecting 3 positional arguments \(a, b, c\), but got 4$" ): - MyExpr(1, 2, 3, 4) # type: ignore[call-arg] + MyExpr(1, 2, 3, 4) # ty:ignore[too-many-positional-arguments] with pytest.raises(ValueError, match=r"^Missing constructor arguments: c$"): - MyExpr(1, 2) # type: ignore[call-arg] + MyExpr(1, 2) # ty:ignore[missing-argument] expr = MyExpr(1, 2, 3) assert expr.args == (1, 2, 3) expr = MyExpr(1, b=2, c=3) @@ -79,9 +79,9 @@ def test_set_assumptions(): class MySqrt: ... expr = MySqrt() - assert expr.is_commutative # type: ignore[attr-defined] - assert not expr.is_negative # type: ignore[attr-defined] - assert expr.is_real # type: ignore[attr-defined] + assert expr.is_commutative + assert not expr.is_negative + assert expr.is_real def test_update_field_metadata(): diff --git a/tests/sympy/decorator/test_unevaluated.py b/tests/sympy/decorator/test_unevaluated.py index 163e9e7e..93179cf8 100644 --- a/tests/sympy/decorator/test_unevaluated.py +++ b/tests/sympy/decorator/test_unevaluated.py @@ -17,7 +17,7 @@ class MyExpr(sp.Expr): class_name = "MyExpr" def evaluate(self) -> sp.Expr: - return self.x**self.m # type: ignore[return-value] + return self.x**self.m # ty:ignore[invalid-return-type] x_expr = MyExpr(4) assert x_expr.x is sp.Integer(4) @@ -99,7 +99,7 @@ def evaluate(self) -> sp.Expr: assert expr.default_return is None half = sp.Rational(1, 2) - FunkyPower.default_return = half + FunkyPower.default_return = half # ty:ignore[invalid-assignment] assert exprs[0].doit() == half assert exprs[1].doit() == half assert exprs[2].doit() == half @@ -132,7 +132,7 @@ def test_latex_repr_typo_warning(): ): @unevaluated(real=False) - class MyExpr(sp.Expr): # pyright: ignore[reportUnusedClass] + class MyExpr(sp.Expr): x: sp.Symbol _latex_repr = "" @@ -158,7 +158,7 @@ class MySqrt(sp.Expr): expr = MySqrt(-1) assert expr.is_commutative - assert expr.is_complex # type: ignore[attr-defined] + assert expr.is_complex def test_non_symbols_construction(): @@ -171,7 +171,7 @@ class BreakupMomentum(sp.Expr): def evaluate(self) -> sp.Expr: s, m1, m2 = self.args - return sp.sqrt((s - (m1 + m2) ** 2) * (s - (m1 - m2) ** 2)) # type: ignore[operator] + return sp.sqrt((s - (m1 + m2) ** 2) * (s - (m1 - m2) ** 2)) m0, ma, mb = sp.symbols("m0 m_a m_b") expr = BreakupMomentum(m0**2, ma, mb) diff --git a/tests/sympy/test_cache_helpers.py b/tests/sympy/test_cache_helpers.py index 6aa238d6..9d30681a 100644 --- a/tests/sympy/test_cache_helpers.py +++ b/tests/sympy/test_cache_helpers.py @@ -92,8 +92,8 @@ def test_reaction(self, expected_hash: str, formalism: SpinFormalism): @pytest.mark.parametrize( ("expected_hashes", "formalism"), [ - ({"2b77221", "dc1ee0e"}, "canonical-helicity"), - ({"1ba1704", "cbd5ff0", "ceecb32"}, "helicity"), + ({"2b77221", "8397450", "dc1ee0e"}, "canonical-helicity"), + ({"aced899", "cbd5ff0", "ceecb32"}, "helicity"), ], ids=["canonical-helicity", "helicity"], ) diff --git a/tests/sympy/test_cached.py b/tests/sympy/test_cached.py index e4ae9869..32be28d5 100644 --- a/tests/sympy/test_cached.py +++ b/tests/sympy/test_cached.py @@ -47,8 +47,7 @@ def test_simplify(): @pytest.mark.parametrize("amplitude_idx", list(range(4))) def test_simplify_model(amplitude_model: tuple[str, HelicityModel], amplitude_idx: int): _, model = amplitude_model - amplitudes = [model.amplitudes[k] for k in sorted(model.amplitudes, key=str)] - amplitude_expr = amplitudes[amplitude_idx] + _, amplitude_expr = min(model.amplitudes.items(), key=lambda item: str(item[0])) simplified = amplitude_expr.simplify() assert simplified != amplitude_expr diff --git a/uv.lock b/uv.lock index e7c6ebae..7cda0c7c 100644 --- a/uv.lock +++ b/uv.lock @@ -3,7 +3,8 @@ revision = 3 requires-python = ">=3.10" resolution-markers = [ "python_full_version >= '3.14'", - "python_full_version >= '3.11' and python_full_version < '3.14'", + "python_full_version >= '3.12' and python_full_version < '3.14'", + "python_full_version == '3.11.*'", "python_full_version < '3.11'", ] @@ -41,7 +42,7 @@ dependencies = [ [package.optional-dependencies] scipy = [ { name = "scipy", version = "1.15.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "scipy", version = "1.16.2", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "scipy", version = "1.17.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, ] viz = [ { name = "graphviz" }, @@ -52,109 +53,114 @@ dev = [ { name = "ampform", extra = ["scipy", "viz"] }, { name = "black" }, { name = "ipympl" }, - { name = "ipython", version = "8.37.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "ipython", version = "9.6.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "ipython", version = "8.38.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, + { name = "ipython", version = "9.10.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "ipywidgets" }, + { name = "jupyter-ruff" }, { name = "jupyterlab" }, - { name = "jupyterlab-code-formatter" }, { name = "jupyterlab-git" }, { name = "jupyterlab-lsp" }, { name = "jupyterlab-myst" }, { name = "jupyterlab-quickopen" }, { name = "matplotlib" }, - { name = "mpl-interactions" }, - { name = "mypy" }, { name = "myst-nb" }, - { name = "nbmake" }, { name = "numpy", version = "2.2.6", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "numpy", version = "2.3.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, - { name = "poethepoet" }, + { name = "numpy", version = "2.4.2", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "pytest" }, { name = "pytest-benchmark" }, { name = "pytest-cov" }, { name = "pytest-profiling" }, { name = "pytest-xdist" }, { name = "python-lsp-ruff" }, - { name = "python-lsp-server", extra = ["rope"] }, + { name = "python-lsp-server" }, { name = "rich" }, { name = "ruff" }, { name = "sphinx", version = "8.1.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "sphinx", version = "8.2.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "sphinx", version = "9.0.4", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version == '3.11.*'" }, + { name = "sphinx", version = "9.1.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.12'" }, { name = "sphinx-api-relink" }, - { name = "sphinx-autobuild", version = "2024.10.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "sphinx-autobuild", version = "2025.8.25", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "sphinx-book-theme" }, { name = "sphinx-codeautolink", extra = ["ipython"] }, { name = "sphinx-comments" }, { name = "sphinx-copybutton" }, - { name = "sphinx-design" }, + { name = "sphinx-design", version = "0.6.1", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, + { name = "sphinx-design", version = "0.7.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "sphinx-hep-pdgref" }, { name = "sphinx-pybtex-etal-style" }, { name = "sphinx-thebe" }, { name = "sphinx-togglebutton" }, { name = "sphinxcontrib-bibtex" }, + { name = "sympy-plot-backends" }, + { name = "ty" }, ] doc = [ { name = "ampform", extra = ["scipy", "viz"] }, { name = "black" }, { name = "ipympl" }, { name = "matplotlib" }, - { name = "mpl-interactions" }, { name = "myst-nb" }, { name = "numpy", version = "2.2.6", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "numpy", version = "2.3.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "numpy", version = "2.4.2", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "rich" }, { name = "sphinx", version = "8.1.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "sphinx", version = "8.2.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "sphinx", version = "9.0.4", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version == '3.11.*'" }, + { name = "sphinx", version = "9.1.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.12'" }, { name = "sphinx-api-relink" }, { name = "sphinx-book-theme" }, { name = "sphinx-codeautolink", extra = ["ipython"] }, { name = "sphinx-comments" }, { name = "sphinx-copybutton" }, - { name = "sphinx-design" }, + { name = "sphinx-design", version = "0.6.1", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, + { name = "sphinx-design", version = "0.7.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "sphinx-hep-pdgref" }, { name = "sphinx-pybtex-etal-style" }, { name = "sphinx-thebe" }, { name = "sphinx-togglebutton" }, { name = "sphinxcontrib-bibtex" }, + { name = "sympy-plot-backends" }, ] jupyter = [ + { name = "jupyter-ruff" }, { name = "jupyterlab" }, - { name = "jupyterlab-code-formatter" }, { name = "jupyterlab-git" }, { name = "jupyterlab-lsp" }, { name = "jupyterlab-myst" }, { name = "jupyterlab-quickopen" }, { name = "python-lsp-ruff" }, - { name = "python-lsp-server", extra = ["rope"] }, + { name = "python-lsp-server" }, ] notebooks = [ { name = "ampform", extra = ["scipy", "viz"] }, { name = "black" }, { name = "ipympl" }, { name = "matplotlib" }, - { name = "mpl-interactions" }, { name = "numpy", version = "2.2.6", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "numpy", version = "2.3.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "numpy", version = "2.4.2", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "rich" }, + { name = "sympy-plot-backends" }, ] style = [ - { name = "ipython", version = "8.37.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "ipython", version = "9.6.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "ampform", extra = ["scipy", "viz"] }, + { name = "black" }, + { name = "ipympl" }, + { name = "ipython", version = "8.38.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, + { name = "ipython", version = "9.10.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "ipywidgets" }, - { name = "mypy" }, + { name = "matplotlib" }, { name = "numpy", version = "2.2.6", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "numpy", version = "2.3.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "numpy", version = "2.4.2", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "pytest" }, { name = "pytest-benchmark" }, + { name = "rich" }, { name = "sphinx-api-relink" }, + { name = "sympy-plot-backends" }, + { name = "ty" }, ] test = [ { name = "ampform", extra = ["scipy"] }, { name = "ipywidgets" }, - { name = "nbmake" }, { name = "numpy", version = "2.2.6", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "numpy", version = "2.3.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "numpy", version = "2.4.2", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "pytest" }, { name = "pytest-benchmark" }, { name = "pytest-cov" }, @@ -162,14 +168,20 @@ test = [ { name = "pytest-xdist" }, ] types = [ - { name = "ipython", version = "8.37.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "ipython", version = "9.6.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "ampform", extra = ["scipy", "viz"] }, + { name = "black" }, + { name = "ipympl" }, + { name = "ipython", version = "8.38.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, + { name = "ipython", version = "9.10.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "ipywidgets" }, + { name = "matplotlib" }, { name = "numpy", version = "2.2.6", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version < '3.11'" }, - { name = "numpy", version = "2.3.3", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, + { name = "numpy", version = "2.4.2", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version >= '3.11'" }, { name = "pytest" }, { name = "pytest-benchmark" }, + { name = "rich" }, { name = "sphinx-api-relink" }, + { name = "sympy-plot-backends" }, ] [package.metadata] @@ -177,7 +189,7 @@ requires-dist = [ { name = "attrs", specifier = ">=20.1.0" }, { name = "frozendict" }, { name = "graphviz", marker = "extra == 'viz'" }, - { name = "qrules", specifier = ">=0.9.6" }, + { name = "qrules", git = "https://github.com/ComPWA/qrules?rev=75bc682a56ca07b1eadeafeca4fb1676de7281b4" }, { name = "scipy", marker = "extra == 'scipy'" }, { name = "sympy", specifier = ">=1.10" }, ] @@ -191,100 +203,98 @@ dev = [ { name = "ipympl" }, { name = "ipython" }, { name = "ipywidgets" }, + { name = "jupyter-ruff" }, { name = "jupyterlab" }, - { name = "jupyterlab-code-formatter" }, { name = "jupyterlab-git" }, { name = "jupyterlab-lsp" }, { name = "jupyterlab-myst" }, { name = "jupyterlab-quickopen" }, { name = "matplotlib" }, - { name = "matplotlib", specifier = "<3.9.0" }, - { name = "mpl-interactions" }, - { name = "mypy", specifier = ">=0.730" }, { name = "myst-nb" }, - { name = "nbmake" }, { name = "numpy" }, - { name = "poethepoet" }, { name = "pytest" }, { name = "pytest-benchmark" }, { name = "pytest-cov" }, { name = "pytest-profiling" }, { name = "pytest-xdist" }, { name = "python-lsp-ruff" }, - { name = "python-lsp-server", extras = ["rope"] }, + { name = "python-lsp-server" }, { name = "rich" }, { name = "ruff" }, { name = "sphinx" }, - { name = "sphinx-api-relink", specifier = ">=0.0.3" }, - { name = "sphinx-api-relink", specifier = ">=0.0.4" }, - { name = "sphinx-autobuild" }, + { name = "sphinx-api-relink", git = "https://github.com/ComPWA/sphinx-api-relink?rev=5e18cb0981eb31680926bdb6511078f4308f38e0" }, { name = "sphinx-book-theme" }, { name = "sphinx-codeautolink", extras = ["ipython"] }, { name = "sphinx-comments" }, { name = "sphinx-copybutton" }, { name = "sphinx-design" }, { name = "sphinx-hep-pdgref" }, - { name = "sphinx-pybtex-etal-style" }, + { name = "sphinx-pybtex-etal-style", git = "https://github.com/ComPWA/sphinx-pybtex-etal-style?rev=763f4d99a68a1789689c5a4f60ee86498f92ed31" }, { name = "sphinx-thebe" }, { name = "sphinx-togglebutton" }, { name = "sphinxcontrib-bibtex", specifier = ">=2" }, + { name = "sympy-plot-backends" }, + { name = "ty" }, ] doc = [ { name = "ampform", extras = ["scipy", "viz"] }, { name = "black" }, { name = "ipympl" }, { name = "matplotlib" }, - { name = "matplotlib", specifier = "<3.9.0" }, - { name = "mpl-interactions" }, { name = "myst-nb" }, { name = "numpy" }, { name = "rich" }, { name = "sphinx" }, - { name = "sphinx-api-relink", specifier = ">=0.0.4" }, + { name = "sphinx-api-relink", git = "https://github.com/ComPWA/sphinx-api-relink?rev=5e18cb0981eb31680926bdb6511078f4308f38e0" }, { name = "sphinx-book-theme" }, { name = "sphinx-codeautolink", extras = ["ipython"] }, { name = "sphinx-comments" }, { name = "sphinx-copybutton" }, { name = "sphinx-design" }, { name = "sphinx-hep-pdgref" }, - { name = "sphinx-pybtex-etal-style" }, + { name = "sphinx-pybtex-etal-style", git = "https://github.com/ComPWA/sphinx-pybtex-etal-style?rev=763f4d99a68a1789689c5a4f60ee86498f92ed31" }, { name = "sphinx-thebe" }, { name = "sphinx-togglebutton" }, { name = "sphinxcontrib-bibtex", specifier = ">=2" }, + { name = "sympy-plot-backends" }, ] jupyter = [ + { name = "jupyter-ruff" }, { name = "jupyterlab" }, - { name = "jupyterlab-code-formatter" }, { name = "jupyterlab-git" }, { name = "jupyterlab-lsp" }, { name = "jupyterlab-myst" }, { name = "jupyterlab-quickopen" }, { name = "python-lsp-ruff" }, - { name = "python-lsp-server", extras = ["rope"] }, + { name = "python-lsp-server" }, ] notebooks = [ { name = "ampform", extras = ["scipy", "viz"] }, { name = "black" }, { name = "ipympl" }, { name = "matplotlib" }, - { name = "matplotlib", specifier = "<3.9.0" }, - { name = "mpl-interactions" }, { name = "numpy" }, { name = "rich" }, + { name = "sympy-plot-backends" }, ] style = [ + { name = "ampform", extras = ["scipy", "viz"] }, + { name = "black" }, + { name = "ipympl" }, { name = "ipython" }, { name = "ipywidgets" }, - { name = "mypy", specifier = ">=0.730" }, + { name = "matplotlib" }, { name = "numpy" }, { name = "pytest" }, { name = "pytest-benchmark" }, - { name = "sphinx-api-relink", specifier = ">=0.0.3" }, + { name = "rich" }, + { name = "sphinx-api-relink", git = "https://github.com/ComPWA/sphinx-api-relink?rev=5e18cb0981eb31680926bdb6511078f4308f38e0" }, + { name = "sympy-plot-backends" }, + { name = "ty" }, ] test = [ { name = "ampform", extras = ["scipy"] }, { name = "ipywidgets" }, - { name = "nbmake" }, { name = "numpy" }, { name = "pytest" }, { name = "pytest-benchmark" }, @@ -293,27 +303,41 @@ test = [ { name = "pytest-xdist" }, ] types = [ + { name = "ampform", extras = ["scipy", "viz"] }, + { name = "black" }, + { name = "ipympl" }, { name = "ipython" }, { name = "ipywidgets" }, + { name = "matplotlib" }, { name = "numpy" }, { name = "pytest" }, { name = "pytest-benchmark" }, - { name = "sphinx-api-relink", specifier = ">=0.0.3" }, + { name = "rich" }, + { name = "sphinx-api-relink", git = 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