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MAINT: upgrade lock files #35

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08aa9db
MAINT: upgrade lock files
pre-commit-ci[bot] Jan 5, 2026
18115fe
MAINT: implement pre-commit autofixes
pre-commit-ci[bot] Jan 5, 2026
f1d97e9
MAINT: upgrade lock files and dev config
redeboer Jan 28, 2026
f191944
MAINT: update lock files
web-flow Feb 1, 2026
fff11ca
DX: suppress `myst.directive_unknown`
redeboer Feb 1, 2026
6a4bd09
FIX: remove PWA pages intersphinx
redeboer Feb 1, 2026
0ef1cbe
MAINT: upgrade lock files
redeboer Feb 1, 2026
71a6f37
MAINT: update link to Chung spin formalisms
redeboer Feb 1, 2026
dc5628f
FIX: downgrade polarimetry
redeboer Feb 1, 2026
3655a6c
MAINT: upgrade lock files
redeboer Feb 1, 2026
40f51da
FIX: update link to Kutschke
redeboer Feb 1, 2026
2c1dd18
FIX: update link to `sph_harm`
redeboer Feb 1, 2026
384f8ea
MAINT: update lock files
web-flow Feb 1, 2026
0301cd6
MAINT: upgrade lock files
redeboer Feb 4, 2026
22cac47
MAINT: update lock files
web-flow Feb 4, 2026
54f99d0
FIX: remove Varenna slides citation
redeboer Feb 4, 2026
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1 change: 1 addition & 0 deletions .cspell.json
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Expand Up @@ -28,6 +28,7 @@
".editorconfig",
".envrc",
".gitattributes",
".github/dependabot.yml",
".gitignore",
".pre-commit-config.yaml",
".prettierignore",
Expand Down
24 changes: 24 additions & 0 deletions .github/dependabot.yml
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@@ -0,0 +1,24 @@
version: 2

multi-ecosystem-groups:
lock:
assignees: [redeboer]
commit-message: { prefix: MAINT }
schedule: { interval: quarterly }

updates:
- package-ecosystem: github-actions
directory: "/"
labels: [⬆️ Lock]
multi-ecosystem-group: lock
patterns: ["*"]
- package-ecosystem: julia
directory: "/"
labels: [⬆️ Lock]
multi-ecosystem-group: lock
patterns: ["*"]
- package-ecosystem: uv
directory: "/"
labels: [⬆️ Lock]
multi-ecosystem-group: lock
patterns: ["*"]
11 changes: 2 additions & 9 deletions .github/workflows/ci.yml
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Expand Up @@ -17,23 +17,16 @@ on:
- epic/*
- "[0-9]+.[0-9]+.x"
workflow_dispatch:
inputs:
specific-pip-packages:
description: Run CI with specific pip packages
required: false
type: string

jobs:
doc:
uses: ComPWA/actions/.github/workflows/ci-docs.yml@v3.0
uses: ComPWA/actions/.github/workflows/ci-docs.yml@v4.0
permissions:
pages: write
id-token: write
with:
gh-pages: true
specific-pip-packages: ${{ inputs.specific-pip-packages }}
style:
if: inputs.specific-pip-packages == ''
secrets:
token: ${{ secrets.PAT }}
uses: ComPWA/actions/.github/workflows/pre-commit.yml@v3.0
uses: ComPWA/actions/.github/workflows/pre-commit.yml@v4.0
4 changes: 2 additions & 2 deletions .github/workflows/clean-caches.yml
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Expand Up @@ -14,9 +14,9 @@ on:
jobs:
cleanup:
name: Remove caches
runs-on: ubuntu-24.04
runs-on: ubuntu-slim
steps:
- uses: ComPWA/actions/clean-caches@v3
- uses: ComPWA/actions/clean-caches@v4
with:
GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
ref: ${{ inputs.ref }}
2 changes: 1 addition & 1 deletion .github/workflows/lock.yml
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Expand Up @@ -19,6 +19,6 @@ on:

jobs:
lock:
uses: ComPWA/actions/.github/workflows/lock.yml@v3
uses: ComPWA/actions/.github/workflows/lock.yml@v4
secrets:
token: ${{ secrets.PAT }}
2 changes: 1 addition & 1 deletion .github/workflows/pr-linting.yml
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Expand Up @@ -11,4 +11,4 @@ on:

jobs:
lint-pr:
uses: ComPWA/actions/.github/workflows/pr-linting.yml@v3
uses: ComPWA/actions/.github/workflows/pr-linting.yml@v4
2 changes: 0 additions & 2 deletions .gitignore
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Expand Up @@ -25,7 +25,6 @@ version.py
.coverage.*
.ipynb_checkpoints/
.jupyter_ystore.db
.mypy*/
.pytest_cache/
.virtual_documents/
__pycache__/
Expand All @@ -50,5 +49,4 @@ pyvenv*/
!.readthedocs.yml
!.vscode/*.json
!codecov.yml
!pyrightconfig.json
.jupyter_ystore.db
31 changes: 19 additions & 12 deletions .pre-commit-config.yaml
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@@ -1,9 +1,8 @@
ci:
autofix_commit_msg: "MAINT: implement pre-commit autofixes"
autoupdate_commit_msg: "MAINT: upgrade lock files"
autoupdate_schedule: quarterly
skip:
- pyright
- ty
- uv-lock

repos:
Expand All @@ -13,7 +12,7 @@ repos:
- id: check-useless-excludes

- repo: https://github.com/ComPWA/policy
rev: 0.7.3
rev: 0.8.2rc15
hooks:
- id: check-dev-files
args:
Expand All @@ -24,13 +23,15 @@ repos:
- --package-manager=pixi+uv
- --repo-name=report
- --repo-title=ComPWA Technical Reports
- --type-checker=ty
- id: colab-toc-visible
- id: fix-nbformat-version
- id: remove-empty-tags
- id: set-nb-display-name
- id: strip-nb-whitespace

- repo: https://github.com/kynan/nbstripout
rev: 0.8.1
rev: 0.9.0
hooks:
- id: nbstripout
args:
Expand Down Expand Up @@ -77,7 +78,7 @@ repos:
)$

- repo: https://github.com/astral-sh/ruff-pre-commit
rev: v0.14.0
rev: v0.15.0
hooks:
- id: ruff-check
args: [--fix]
Expand Down Expand Up @@ -106,7 +107,7 @@ repos:
- id: trailing-whitespace

- repo: https://github.com/ComPWA/prettier-pre-commit
rev: v3.4.2
rev: v3.8.1
hooks:
- id: prettier

Expand All @@ -123,12 +124,12 @@ repos:
exclude: (?x)^(.*/Manifest\.toml|.*/Project\.toml)$

- repo: https://github.com/streetsidesoftware/cspell-cli
rev: v9.2.0
rev: v9.6.0
hooks:
- id: cspell

- repo: https://github.com/editorconfig-checker/editorconfig-checker.python
rev: 3.4.0
rev: 3.6.0
hooks:
- id: editorconfig-checker
name: editorconfig
Expand All @@ -148,12 +149,18 @@ repos:
docs/_static/favicon.ico
)$

- repo: https://github.com/ComPWA/pyright-pre-commit
rev: v1.1.406
- repo: local
hooks:
- id: pyright
- id: ty
name: ty
entry: ty check
args: [--no-progress, --output-format=concise]
pass_filenames: false
require_serial: true
language: system
types_or: [python, pyi, jupyter]

- repo: https://github.com/astral-sh/uv-pre-commit
rev: 0.9.2
rev: 0.9.29
hooks:
- id: uv-lock
1 change: 1 addition & 0 deletions .prettierignore
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@@ -1,2 +1,3 @@
*.ipynb
LICENSE
pixi.lock
3 changes: 2 additions & 1 deletion .vscode/extensions.json
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@@ -1,5 +1,6 @@
{
"recommendations": [
"astral-sh.ty",
"charliermarsh.ruff",
"christian-kohler.path-intellisense",
"eamodio.gitlens",
Expand All @@ -11,7 +12,6 @@
"julialang.language-julia",
"mhutchie.git-graph",
"ms-python.python",
"ms-python.vscode-pylance",
"ms-toolsai.jupyter",
"ms-toolsai.vscode-jupyter-cell-tags",
"ms-vscode.live-server",
Expand All @@ -33,6 +33,7 @@
"ms-python.isort",
"ms-python.mypy-type-checker",
"ms-python.pylint",
"ms-python.vscode-pylance",
"ms-toolsai.vscode-jupyter-slideshow",
"travisillig.vscode-json-stable-stringify",
"tyriar.sort-lines"
Expand Down
12 changes: 8 additions & 4 deletions .vscode/settings.json
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Expand Up @@ -27,23 +27,24 @@
"diffEditor.experimental.showMoves": true,
"editor.formatOnSave": true,
"editor.unicodeHighlight.allowedCharacters": {
"\u03bd": true,
"\u03c3": true
"ν": true,
"σ": true
},
"files.associations": {
"**/pixi.lock": "yaml"
},
"git.rebaseWhenSync": true,
"github-actions.workflows.pinned.workflows": [".github/workflows/ci.yml"],
"gitlens.telemetry.enabled": false,
"julia.environmentPath": "${workspaceFolder}/docs/019",
"julia.executablePath": "${workspaceFolder}/.pixi/envs/default/bin/julia",
"livePreview.defaultPreviewPath": "docs/_build/html",
"multiDiffEditor.experimental.enabled": true,
"notebook.codeActionsOnSave": {
"notebook.source.organizeImports": "explicit"
},
"notebook.formatOnSave.enabled": true,
"notebook.gotoSymbols.showAllSymbols": true,
"python.analysis.autoImportCompletions": false,
"python.defaultInterpreterPath": ".venv/bin/python",
"python.terminal.activateEnvironment": false,
"python.testing.pytestEnabled": true,
Expand All @@ -58,5 +59,8 @@
"**/tests/**/__init__.py": true,
"**/uv.lock": true
},
"telemetry.telemetryLevel": "off"
"telemetry.telemetryLevel": "off",
"ty.completions.autoImport": false,
"ty.diagnosticMode": "workspace",
"ty.importStrategy": "fromEnvironment"
}
2 changes: 1 addition & 1 deletion CONTRIBUTING.md
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Expand Up @@ -22,7 +22,7 @@ source .venv/bin/activate
Formatting and linting checks are automatically performed when committing changes. This is done with [pre-commit](https://pre-commit.com). To install the hooks in your local repository, run install `pre-commit` with `uv`:

```shell
uv tool install pre-commit --with pre-commit-uv --force-reinstall
uv tool install pre-commit --with pre-commit-uv --force-reinstall --python=3.13
```

and [`pre-commit install`](https://pre-commit.com/#3-install-the-git-hook-scripts) **once**:
Expand Down
3 changes: 2 additions & 1 deletion README.md
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Expand Up @@ -10,8 +10,9 @@
[![uv](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/uv/main/assets/badge/v0.json)](https://github.com/astral-sh/uv)
[![Pixi Badge](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/prefix-dev/pixi/main/assets/badge/v0.json)](https://pixi.sh)
[![pre-commit.ci status](https://results.pre-commit.ci/badge/github/ComPWA/report/main.svg)](https://results.pre-commit.ci/latest/github/ComPWA/report/main)
[![Spelling checked](https://img.shields.io/badge/cspell-checked-brightgreen.svg)](https://github.com/streetsidesoftware/cspell/tree/master/packages/cspell)
[![Spelling checked](https://img.shields.io/badge/cspell-checked-brightgreen.svg)](https://github.com/streetsidesoftware/cspell/tree/main/packages/cspell)
[![code style: prettier](https://img.shields.io/badge/code_style-prettier-ff69b4.svg?style=flat-square)](https://github.com/prettier/prettier)
[![Ruff](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/charliermarsh/ruff/main/assets/badge/v2.json)](https://github.com/astral-sh/ruff)
[![ty](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/ty/main/assets/badge/v0.json)](https://github.com/astral-sh/ty)

This repository contains the source code for [compwa.github.io/report](https://compwa.github.io/report).
24 changes: 9 additions & 15 deletions docs/000/index.ipynb
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Expand Up @@ -128,8 +128,7 @@
"output_type": "stream",
"text": [
"def _lambdifygenerated(x):\n",
" return (sqrt(x))\n",
"\n"
" return (sqrt(x))\n"
]
}
],
Expand All @@ -156,7 +155,7 @@
"output_type": "stream",
"text": [
"<lambdifygenerated-1>:2: RuntimeWarning: invalid value encountered in sqrt\n",
" return (sqrt(x))\n"
" return (sqrt(x))"
]
},
{
Expand Down Expand Up @@ -222,8 +221,7 @@
"output_type": "stream",
"text": [
"def _lambdifygenerated(x):\n",
" return (sqrt(x))\n",
"\n"
" return (sqrt(x))\n"
]
}
],
Expand All @@ -242,7 +240,7 @@
"name": "stderr",
"output_type": "stream",
"text": [
"WARNING:absl:No GPU/TPU found, falling back to CPU. (Set TF_CPP_MIN_LOG_LEVEL=0 and rerun for more info.)\n"
"WARNING:absl:No GPU/TPU found, falling back to CPU. (Set TF_CPP_MIN_LOG_LEVEL=0 and rerun for more info.)"
]
},
{
Expand Down Expand Up @@ -440,7 +438,7 @@
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
"\u001b[0;31mValueError\u001b[0m Traceback (most recent call last)",
"Input \u001b[0;32mIn [15]\u001b[0m, in \u001b[0;36m<cell line: 1>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> 1\u001b[0m \u001b[43mjax_csqrt\u001b[49m\u001b[43m(\u001b[49m\u001b[43msample\u001b[49m\u001b[43m)\u001b[49m\n",
"\u001b[0;31mValueError\u001b[0m: Non-hashable static arguments are not supported. An error occured while trying to hash an object of type <class 'numpy.ndarray'>, [-1. -0.5 0. 0.5 1. ]. The error was:\nTypeError: unhashable type: 'numpy.ndarray'\n"
"\u001b[0;31mValueError\u001b[0m: Non-hashable static arguments are not supported. An error occured while trying to hash an object of type <class 'numpy.ndarray'>, [-1. -0.5 0. 0.5 1. ]. The error was:\nTypeError: unhashable type: 'numpy.ndarray'"
]
}
],
Expand Down Expand Up @@ -557,8 +555,7 @@
"output_type": "stream",
"text": [
"def _lambdifygenerated(x):\n",
" return (((1j*sqrt(-x)) if (x < 0) else (sqrt(x))))\n",
"\n"
" return (((1j*sqrt(-x)) if (x < 0) else (sqrt(x))))\n"
]
}
],
Expand Down Expand Up @@ -692,8 +689,7 @@
" [less(x, 0), True],\n",
" [1j * sqrt(-x), sqrt(x)],\n",
" default=nan,\n",
" )\n",
"\n"
" )\n"
]
}
],
Expand All @@ -718,8 +714,7 @@
"output_type": "stream",
"text": [
"def _lambdifygenerated(x):\n",
" return (((1j*sqrt(-x)) if (x < 0) else (sqrt(x))))\n",
"\n"
" return (((1j*sqrt(-x)) if (x < 0) else (sqrt(x))))\n"
]
}
],
Expand Down Expand Up @@ -767,8 +762,7 @@
" [less(x, 0), True],\n",
" [1j * sqrt(-x), sqrt(x)],\n",
" default=nan,\n",
" )\n",
"\n"
" )\n"
]
}
],
Expand Down
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