Updated: 04/23/18
This directory contains four sub-directories which contain scripts used for dataset processing. Descriptions for each sub-directory can be found below.
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/pdb_extract/ : This sub-directory contains scripts used to extract Protein Data Bank (PDB) files from Rosetta silent files, a commonly used method of compressing PDB data.
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/scoring/ : This sub-directory contains scripts used to calculate the GDT-TS scores for a given decoy dataset. Documentation on how to use these scripts can be found within the directory.
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/pairwise_generation/ : This sub-directory contains scripts used for generating pairwise distance feature maps. Documentation on how to use these scripts can be found within the directory.
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/torsion_generation/ : This sub-directory contains scripts used for generating torsion angle feature maps decoy structures.