Major feature: Experiment viewer

[Harrison-Oatman]

Objective:

Create an interactive GUI to view in-progress or completed multi-experiments

Short term - this should be a minimal interface without advanced features

Features:

• The GUI should be a standalone interface that can load data whether or not PyCLM is running
  • Consequently, the PyCLM directories must contain sufficient information
• Select experiments, pick a channel, and choose whether to overlay the pattern/segmentation at the timepoint
  • Should also be able to normalize intensity by a set minimum and maximum
• View details about acquisition as contained in hdf5
• Updates as acquisitions are saved to disk
• Export image sequence as .tif

Constraints:

• Limit memory usage: the GUI should not have all imaging data in memory.
• PyCLM processes should not depend on the state of the GUI
• The GUI should not interfere with PyCLM data-writing