Retrain CpGNet methylation models on new pseudobulk data

[adamklie]

Context

First pass at igvf-data/igvf_sc-islet_snm3c/bin/7_cpgnet. A postgrad student has been working on this.

Tasks

• Integrate postgrad student's work
• Train models on new pseudobulk methylation data

[adamklie]

Dependencies

• Blocked by Reprocess snm3C-seq with new samples #11 (needs reprocessed snm3C-seq pseudobulk data)
• Feeds into Repeat and expand variant effect predictions #15 (variant effect predictions)

[adamklie]

Status Update (2026-04-09)

Blocked on #11 (snm3C reprocessing). Deferred.