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NAMESPACE
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44 lines (43 loc) · 1.16 KB
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# Generated by roxygen2: do not edit by hand
export(limmaDEA)
export(limmaFit)
export(muscle_ora)
export(normalize_data)
importFrom(Biobase,"fData<-")
importFrom(Biobase,exprs)
importFrom(Biobase,fData)
importFrom(Biobase,featureNames)
importFrom(Biobase,pData)
importFrom(data.table,":=")
importFrom(data.table,rbindlist)
importFrom(dplyr,"%>%")
importFrom(dplyr,across)
importFrom(dplyr,arrange)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,mutate)
importFrom(edgeR,DGEList)
importFrom(edgeR,filterByExpr)
importFrom(edgeR,normLibSizes)
importFrom(edgeR,voomLmFit)
importFrom(graphics,abline)
importFrom(graphics,barplot)
importFrom(graphics,par)
importFrom(limma,arrayWeights)
importFrom(limma,contrasts.fit)
importFrom(limma,duplicateCorrelation)
importFrom(limma,eBayes)
importFrom(limma,is.fullrank)
importFrom(limma,lmFit)
importFrom(limma,makeContrasts)
importFrom(limma,nonEstimable)
importFrom(limma,plotMDS)
importFrom(limma,plotSA)
importFrom(limma,topTable)
importFrom(stats,mad)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,p.adjust)
importFrom(stats,p.adjust.methods)
importFrom(stats,phyper)
importFrom(stats,terms)