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This repository was archived by the owner on Sep 24, 2019. It is now read-only.
This repository was archived by the owner on Sep 24, 2019. It is now read-only.

Use cell structure as a namespace for Cellular Location encoding in Statements. #73

@abargnesi

Description

@abargnesi

Currently we have a CellStructure annotation and GOCC that pull cell structure terms. With BEL 2.0 we can specify cellular location terms with the location, fromLocation, and toLocation terms.


For existing GOCC namespace:

Incorporate location terms that are children of cellular_component (e.g. plasma membrane). The new terms should use the Location (L) encoding. These should be able to mix with the existing complex-encodings (C) terms in the same file/ConceptScheme.

For MESH namespace:

Create MESH Cellular structure also as a namespace with Location (L) encodings. These should be equivalenced to GOCC Location terms.


Minimally we can get away with adding Location terms to the GOCC namespace.

@ncatlett Does this make sense?

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