The pipeline needs a specific kind of dataset to produce results: 2D, focused (single cells should be resolvable), dual-channel (one for cells, one for EPS), and time series. Pre-stacking only, so roughly the first 24 hours of biofilm growth.
This runs in parallel with tool development. Nona handles the experimental side, we handle the computational requirements. If we run a 48-hour experiment, we keep the post-24h stacking data for Partaker 3 next year.
The pipeline needs a specific kind of dataset to produce results: 2D, focused (single cells should be resolvable), dual-channel (one for cells, one for EPS), and time series. Pre-stacking only, so roughly the first 24 hours of biofilm growth.
This runs in parallel with tool development. Nona handles the experimental side, we handle the computational requirements. If we run a 48-hour experiment, we keep the post-24h stacking data for Partaker 3 next year.