From 79604b143b13f58c73a5261a486bb31a0f5b3176 Mon Sep 17 00:00:00 2001 From: ChrisRackauckas-Claude Date: Sun, 14 Jun 2026 09:20:57 -0400 Subject: [PATCH] Use SciMLTesting v1.2 folder-based run_tests Convert the test suite to SciMLTesting v1.2. JumpProcesses has GPU-only groups (CUDA, Correctness) that are not declared in test_groups.toml and are run by a separate GPU.yml workflow against the gpu/ sub-environment, so the bare folder-discovery mode cannot express them. This uses the explicit-args run_tests form over a folder layout instead. Folder layout: - test/InterfaceI/ : the 21 files GROUP=InterfaceI ran (top-level moves). - test/InterfaceII/ : the 18 files GROUP=InterfaceII ran, including the former test/spatial/*.jl (flattened; each is self-contained). - test/qa/qa.jl : the QA body (runs in the root test env; Aqua + ExplicitImports live in the root [extras]). - test/gpu/ : unchanged (CUDA env). - test/shared/run_spatial_tests.jl : the unused manual spatial driver, parked out of the group folders (never run by runtests.jl). runtests.jl becomes a single run_tests(...) call: - groups = InterfaceI / InterfaceII / CUDA / Correctness thunks. The CUDA and Correctness thunks keep activate_gpu_env() verbatim. - qa = test/qa/qa.jl. - all = ["InterfaceI", "InterfaceII"] (curated; matches the old All = InterfaceI + InterfaceII, with QA/CUDA/Correctness excluded). Each Interface thunk keeps the original @safetestset labels and run order, only updating the include paths to the new folders. The set of tests run under each GROUP value (All, InterfaceI, InterfaceII, QA, CUDA, Correctness) is unchanged. test/test_groups.toml is untouched. Deps: add SciMLTesting to root [extras]/[targets].test and [compat]. Pkg is retained (activate_gpu_env still uses it). SafeTestsets/Test already present. Co-Authored-By: Chris Rackauckas Co-Authored-By: Claude Opus 4.8 (1M context) --- Project.toml | 4 +- test/{ => InterfaceI}/allocations.jl | 0 test/{ => InterfaceI}/bimolerx_test.jl | 0 test/{ => InterfaceI}/bracketing.jl | 0 test/{ => InterfaceI}/callbacks.jl | 0 test/{ => InterfaceI}/constant_rate.jl | 0 test/{ => InterfaceI}/degenerate_rx_cases.jl | 0 test/{ => InterfaceI}/extended_jump_array.jl | 0 test/{ => InterfaceI}/extinction_test.jl | 0 test/{ => InterfaceI}/fp_unknowns.jl | 0 test/{ => InterfaceI}/functionwrappers.jl | 0 test/{ => InterfaceI}/geneexpr_test.jl | 0 test/{ => InterfaceI}/linearreaction_test.jl | 0 test/{ => InterfaceI}/monte_carlo_test.jl | 0 test/{ => InterfaceI}/regular_jumps.jl | 0 .../scale_rates_field_test.jl | 0 test/{ => InterfaceI}/sir_model.jl | 0 test/{ => InterfaceI}/splitcoupled.jl | 0 test/{ => InterfaceI}/ssa_callback_test.jl | 0 test/{ => InterfaceI}/ssa_tests.jl | 0 test/{ => InterfaceI}/table_test.jl | 0 test/{ => InterfaceI}/variable_rate.jl | 0 test/{spatial => InterfaceII}/ABC.jl | 0 test/{spatial => InterfaceII}/bracketing.jl | 0 test/{spatial => InterfaceII}/diffusion.jl | 0 test/{ => InterfaceII}/ensemble_problems.jl | 0 test/{ => InterfaceII}/ensemble_uniqueness.jl | 0 .../extended_jump_array_remake.jl | 0 test/{ => InterfaceII}/hawkes_test.jl | 0 test/{spatial => InterfaceII}/hop_rates.jl | 0 .../jprob_symbol_indexing.jl | 0 test/{ => InterfaceII}/longtimes_test.jl | 0 .../reaction_rates.jl | 0 test/{ => InterfaceII}/remake_test.jl | 0 test/{ => InterfaceII}/reversible_binding.jl | 0 test/{ => InterfaceII}/save_positions.jl | 0 test/{ => InterfaceII}/saveat_regression.jl | 0 .../spatial_majump.jl | 0 test/{ => InterfaceII}/thread_safety.jl | 0 test/{spatial => InterfaceII}/topology.jl | 0 test/{ => qa}/qa.jl | 0 test/runtests.jl | 124 +++++++++--------- test/{spatial => shared}/run_spatial_tests.jl | 0 43 files changed, 67 insertions(+), 61 deletions(-) rename test/{ => InterfaceI}/allocations.jl (100%) rename test/{ => InterfaceI}/bimolerx_test.jl (100%) rename test/{ => InterfaceI}/bracketing.jl (100%) rename test/{ => InterfaceI}/callbacks.jl (100%) rename test/{ => InterfaceI}/constant_rate.jl (100%) rename test/{ => InterfaceI}/degenerate_rx_cases.jl (100%) rename test/{ => InterfaceI}/extended_jump_array.jl (100%) rename test/{ => InterfaceI}/extinction_test.jl (100%) rename test/{ => InterfaceI}/fp_unknowns.jl (100%) rename test/{ => InterfaceI}/functionwrappers.jl (100%) rename test/{ => InterfaceI}/geneexpr_test.jl (100%) rename test/{ => InterfaceI}/linearreaction_test.jl (100%) rename test/{ => InterfaceI}/monte_carlo_test.jl (100%) rename test/{ => InterfaceI}/regular_jumps.jl (100%) rename test/{ => InterfaceI}/scale_rates_field_test.jl (100%) rename test/{ => InterfaceI}/sir_model.jl (100%) rename test/{ => InterfaceI}/splitcoupled.jl (100%) rename test/{ => InterfaceI}/ssa_callback_test.jl (100%) rename test/{ => InterfaceI}/ssa_tests.jl (100%) rename test/{ => InterfaceI}/table_test.jl (100%) rename test/{ => InterfaceI}/variable_rate.jl (100%) rename test/{spatial => InterfaceII}/ABC.jl (100%) rename test/{spatial => InterfaceII}/bracketing.jl (100%) rename test/{spatial => InterfaceII}/diffusion.jl (100%) rename test/{ => InterfaceII}/ensemble_problems.jl (100%) rename test/{ => InterfaceII}/ensemble_uniqueness.jl (100%) rename test/{ => InterfaceII}/extended_jump_array_remake.jl (100%) rename test/{ => InterfaceII}/hawkes_test.jl (100%) rename test/{spatial => InterfaceII}/hop_rates.jl (100%) rename test/{ => InterfaceII}/jprob_symbol_indexing.jl (100%) rename test/{ => InterfaceII}/longtimes_test.jl (100%) rename test/{spatial => InterfaceII}/reaction_rates.jl (100%) rename test/{ => InterfaceII}/remake_test.jl (100%) rename test/{ => InterfaceII}/reversible_binding.jl (100%) rename test/{ => InterfaceII}/save_positions.jl (100%) rename test/{ => InterfaceII}/saveat_regression.jl (100%) rename test/{spatial => InterfaceII}/spatial_majump.jl (100%) rename test/{ => InterfaceII}/thread_safety.jl (100%) rename test/{spatial => InterfaceII}/topology.jl (100%) rename test/{ => qa}/qa.jl (100%) rename test/{spatial => shared}/run_spatial_tests.jl (100%) diff --git a/Project.toml b/Project.toml index 2689a8214..d90a03754 100644 --- a/Project.toml +++ b/Project.toml @@ -55,6 +55,7 @@ RecursiveArrayTools = "4.3.0, 4" Reexport = "1.2.2" SafeTestsets = "0.1" SciMLBase = "3.18.0, 3.1" +SciMLTesting = "1" StableRNGs = "1" StaticArrays = "1.9.18" Statistics = "1" @@ -74,10 +75,11 @@ OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" OrdinaryDiffEqFunctionMap = "d3585ca7-f5d3-4ba6-8057-292ed1abd90f" Pkg = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" SafeTestsets = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f" +SciMLTesting = "09d9d899-5365-40a9-917a-5f67fddea283" StableRNGs = "860ef19b-820b-49d6-a774-d7a799459cd3" Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" StochasticDiffEq = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [targets] -test = ["ADTypes", "Aqua", "ExplicitImports", "FastBroadcast", "LinearAlgebra", "LinearSolve", "OrdinaryDiffEq", "OrdinaryDiffEqFunctionMap", "Pkg", "SafeTestsets", "StableRNGs", "Statistics", "StochasticDiffEq", "Test"] +test = ["ADTypes", "Aqua", "ExplicitImports", "FastBroadcast", "LinearAlgebra", "LinearSolve", "OrdinaryDiffEq", "OrdinaryDiffEqFunctionMap", "Pkg", "SafeTestsets", "SciMLTesting", "StableRNGs", "Statistics", "StochasticDiffEq", "Test"] diff --git a/test/allocations.jl b/test/InterfaceI/allocations.jl similarity index 100% rename from test/allocations.jl rename to test/InterfaceI/allocations.jl diff --git a/test/bimolerx_test.jl b/test/InterfaceI/bimolerx_test.jl similarity index 100% rename from test/bimolerx_test.jl rename to test/InterfaceI/bimolerx_test.jl diff --git a/test/bracketing.jl b/test/InterfaceI/bracketing.jl similarity index 100% rename from test/bracketing.jl rename to test/InterfaceI/bracketing.jl diff --git a/test/callbacks.jl b/test/InterfaceI/callbacks.jl similarity index 100% rename from test/callbacks.jl rename to test/InterfaceI/callbacks.jl diff --git a/test/constant_rate.jl b/test/InterfaceI/constant_rate.jl similarity index 100% rename from test/constant_rate.jl rename to test/InterfaceI/constant_rate.jl diff --git a/test/degenerate_rx_cases.jl b/test/InterfaceI/degenerate_rx_cases.jl similarity index 100% rename from test/degenerate_rx_cases.jl rename to test/InterfaceI/degenerate_rx_cases.jl diff --git a/test/extended_jump_array.jl b/test/InterfaceI/extended_jump_array.jl similarity index 100% rename from test/extended_jump_array.jl rename to test/InterfaceI/extended_jump_array.jl diff --git a/test/extinction_test.jl b/test/InterfaceI/extinction_test.jl similarity index 100% rename from test/extinction_test.jl rename to test/InterfaceI/extinction_test.jl diff --git a/test/fp_unknowns.jl b/test/InterfaceI/fp_unknowns.jl similarity index 100% rename from test/fp_unknowns.jl rename to test/InterfaceI/fp_unknowns.jl diff --git a/test/functionwrappers.jl b/test/InterfaceI/functionwrappers.jl similarity index 100% rename from test/functionwrappers.jl rename to test/InterfaceI/functionwrappers.jl diff --git a/test/geneexpr_test.jl b/test/InterfaceI/geneexpr_test.jl similarity index 100% rename from test/geneexpr_test.jl rename to test/InterfaceI/geneexpr_test.jl diff --git a/test/linearreaction_test.jl b/test/InterfaceI/linearreaction_test.jl similarity index 100% rename from test/linearreaction_test.jl rename to test/InterfaceI/linearreaction_test.jl diff --git a/test/monte_carlo_test.jl b/test/InterfaceI/monte_carlo_test.jl similarity index 100% rename from test/monte_carlo_test.jl rename to test/InterfaceI/monte_carlo_test.jl diff --git a/test/regular_jumps.jl b/test/InterfaceI/regular_jumps.jl similarity index 100% rename from test/regular_jumps.jl rename to test/InterfaceI/regular_jumps.jl diff --git a/test/scale_rates_field_test.jl b/test/InterfaceI/scale_rates_field_test.jl similarity index 100% rename from test/scale_rates_field_test.jl rename to test/InterfaceI/scale_rates_field_test.jl diff --git a/test/sir_model.jl b/test/InterfaceI/sir_model.jl similarity index 100% rename from test/sir_model.jl rename to test/InterfaceI/sir_model.jl diff --git a/test/splitcoupled.jl b/test/InterfaceI/splitcoupled.jl similarity index 100% rename from test/splitcoupled.jl rename to test/InterfaceI/splitcoupled.jl diff --git a/test/ssa_callback_test.jl b/test/InterfaceI/ssa_callback_test.jl similarity index 100% rename from test/ssa_callback_test.jl rename to test/InterfaceI/ssa_callback_test.jl diff --git a/test/ssa_tests.jl b/test/InterfaceI/ssa_tests.jl similarity index 100% rename from test/ssa_tests.jl rename to test/InterfaceI/ssa_tests.jl diff --git a/test/table_test.jl b/test/InterfaceI/table_test.jl similarity index 100% rename from test/table_test.jl rename to test/InterfaceI/table_test.jl diff --git a/test/variable_rate.jl b/test/InterfaceI/variable_rate.jl similarity index 100% rename from test/variable_rate.jl rename to test/InterfaceI/variable_rate.jl diff --git a/test/spatial/ABC.jl b/test/InterfaceII/ABC.jl similarity index 100% rename from test/spatial/ABC.jl rename to test/InterfaceII/ABC.jl diff --git a/test/spatial/bracketing.jl b/test/InterfaceII/bracketing.jl similarity index 100% rename from test/spatial/bracketing.jl rename to test/InterfaceII/bracketing.jl diff --git a/test/spatial/diffusion.jl b/test/InterfaceII/diffusion.jl similarity index 100% rename from test/spatial/diffusion.jl rename to test/InterfaceII/diffusion.jl diff --git a/test/ensemble_problems.jl b/test/InterfaceII/ensemble_problems.jl similarity index 100% rename from test/ensemble_problems.jl rename to test/InterfaceII/ensemble_problems.jl diff --git a/test/ensemble_uniqueness.jl b/test/InterfaceII/ensemble_uniqueness.jl similarity index 100% rename from test/ensemble_uniqueness.jl rename to test/InterfaceII/ensemble_uniqueness.jl diff --git a/test/extended_jump_array_remake.jl b/test/InterfaceII/extended_jump_array_remake.jl similarity index 100% rename from test/extended_jump_array_remake.jl rename to test/InterfaceII/extended_jump_array_remake.jl diff --git a/test/hawkes_test.jl b/test/InterfaceII/hawkes_test.jl similarity index 100% rename from test/hawkes_test.jl rename to test/InterfaceII/hawkes_test.jl diff --git a/test/spatial/hop_rates.jl b/test/InterfaceII/hop_rates.jl similarity index 100% rename from test/spatial/hop_rates.jl rename to test/InterfaceII/hop_rates.jl diff --git a/test/jprob_symbol_indexing.jl b/test/InterfaceII/jprob_symbol_indexing.jl similarity index 100% rename from test/jprob_symbol_indexing.jl rename to test/InterfaceII/jprob_symbol_indexing.jl diff --git a/test/longtimes_test.jl b/test/InterfaceII/longtimes_test.jl similarity index 100% rename from test/longtimes_test.jl rename to test/InterfaceII/longtimes_test.jl diff --git a/test/spatial/reaction_rates.jl b/test/InterfaceII/reaction_rates.jl similarity index 100% rename from test/spatial/reaction_rates.jl rename to test/InterfaceII/reaction_rates.jl diff --git a/test/remake_test.jl b/test/InterfaceII/remake_test.jl similarity index 100% rename from test/remake_test.jl rename to test/InterfaceII/remake_test.jl diff --git a/test/reversible_binding.jl b/test/InterfaceII/reversible_binding.jl similarity index 100% rename from test/reversible_binding.jl rename to test/InterfaceII/reversible_binding.jl diff --git a/test/save_positions.jl b/test/InterfaceII/save_positions.jl similarity index 100% rename from test/save_positions.jl rename to test/InterfaceII/save_positions.jl diff --git a/test/saveat_regression.jl b/test/InterfaceII/saveat_regression.jl similarity index 100% rename from test/saveat_regression.jl rename to test/InterfaceII/saveat_regression.jl diff --git a/test/spatial/spatial_majump.jl b/test/InterfaceII/spatial_majump.jl similarity index 100% rename from test/spatial/spatial_majump.jl rename to test/InterfaceII/spatial_majump.jl diff --git a/test/thread_safety.jl b/test/InterfaceII/thread_safety.jl similarity index 100% rename from test/thread_safety.jl rename to test/InterfaceII/thread_safety.jl diff --git a/test/spatial/topology.jl b/test/InterfaceII/topology.jl similarity index 100% rename from test/spatial/topology.jl rename to test/InterfaceII/topology.jl diff --git a/test/qa.jl b/test/qa/qa.jl similarity index 100% rename from test/qa.jl rename to test/qa/qa.jl diff --git a/test/runtests.jl b/test/runtests.jl index 9a2dfc246..746382dda 100644 --- a/test/runtests.jl +++ b/test/runtests.jl @@ -1,7 +1,6 @@ #! format: off using JumpProcesses, SafeTestsets, Pkg - -const GROUP = get(ENV, "GROUP", "All") +using SciMLTesting function activate_gpu_env() Pkg.activate("gpu") @@ -9,61 +8,66 @@ function activate_gpu_env() Pkg.instantiate() end -@time begin - if GROUP == "QA" - @time @safetestset "QA Tests" begin include("qa.jl") end - end - - if GROUP == "All" || GROUP == "InterfaceI" - @time @safetestset "Constant Rate Tests" begin include("constant_rate.jl") end - @time @safetestset "Variable Rate Tests" begin include("variable_rate.jl") end - @time @safetestset "ExtendedJumpArray Tests" begin include("extended_jump_array.jl") end - @time @safetestset "FunctionWrapper Tests" begin include("functionwrappers.jl") end - @time @safetestset "Monte Carlo Tests" begin include("monte_carlo_test.jl") end - @time @safetestset "Split Coupled Tests" begin include("splitcoupled.jl") end - @time @safetestset "SSA Tests" begin include("ssa_tests.jl") end - @time @safetestset "Tau Leaping Tests" begin include("regular_jumps.jl") end - @time @safetestset "Simple SSA Callback Test" begin include("ssa_callback_test.jl") end - @time @safetestset "SIR Discrete Callback Test" begin include("sir_model.jl") end - @time @safetestset "Callback Merging Tests" begin include("callbacks.jl") end - @time @safetestset "Linear Reaction SSA Test" begin include("linearreaction_test.jl") end - @time @safetestset "Mass Action Jump Tests; Gene Expr Model" begin include("geneexpr_test.jl") end - @time @safetestset "Mass Action Jump Tests; Nonlinear Rx Model" begin include("bimolerx_test.jl") end - @time @safetestset "Mass Action Jump Tests; Special Cases" begin include("degenerate_rx_cases.jl") end - @time @safetestset "Mass Action Jump Tests; Floating Point Inputs" begin include("fp_unknowns.jl") end - @time @safetestset "scale_rates Field Tests" begin include("scale_rates_field_test.jl") end - @time @safetestset "Direct allocations test" begin include("allocations.jl") end - @time @safetestset "Bracketing Tests" begin include("bracketing.jl") end - @time @safetestset "Composition-Rejection Table Tests" begin include("table_test.jl") end - @time @safetestset "Extinction test" begin include("extinction_test.jl") end - end - if GROUP == "All" || GROUP == "InterfaceII" - @time @safetestset "Saveat Regression test" begin include("saveat_regression.jl") end - @time @safetestset "Save_positions test" begin include("save_positions.jl") end - @time @safetestset "Ensemble Uniqueness test" begin include("ensemble_uniqueness.jl") end - @time @safetestset "Thread Safety test" begin include("thread_safety.jl") end - @time @safetestset "Ensemble Problem Tests" begin include("ensemble_problems.jl") end - @time @safetestset "A + B <--> C" begin include("reversible_binding.jl") end - @time @safetestset "Remake tests" begin include("remake_test.jl") end - @time @safetestset "ExtendedJumpArray remake tests" begin include("extended_jump_array_remake.jl") end - @time @safetestset "Symbol based problem indexing" begin include("jprob_symbol_indexing.jl") end - @time @safetestset "Long time accuracy test" begin include("longtimes_test.jl") end - @time @safetestset "Hawkes process" begin include("hawkes_test.jl") end - @time @safetestset "Reaction rates" begin include("spatial/reaction_rates.jl") end - @time @safetestset "Hop rates" begin include("spatial/hop_rates.jl") end - @time @safetestset "Topology" begin include("spatial/topology.jl") end - @time @safetestset "Spatial bracketing Tests" begin include("spatial/bracketing.jl") end - @time @safetestset "Spatial A + B <--> C" begin include("spatial/ABC.jl") end - @time @safetestset "Spatially Varying Reaction Rates" begin include("spatial/spatial_majump.jl") end - @time @safetestset "Pure diffusion" begin include("spatial/diffusion.jl") end - end - - if GROUP == "CUDA" - activate_gpu_env() - @time @safetestset "GPU Tau Leaping test" begin include("gpu/regular_jumps.jl") end - end - - if GROUP == "Correctness" - activate_gpu_env() - end -end +run_tests(; + core = function () + return nothing + end, + groups = Dict( + "InterfaceI" => function () + @time @safetestset "Constant Rate Tests" begin include("InterfaceI/constant_rate.jl") end + @time @safetestset "Variable Rate Tests" begin include("InterfaceI/variable_rate.jl") end + @time @safetestset "ExtendedJumpArray Tests" begin include("InterfaceI/extended_jump_array.jl") end + @time @safetestset "FunctionWrapper Tests" begin include("InterfaceI/functionwrappers.jl") end + @time @safetestset "Monte Carlo Tests" begin include("InterfaceI/monte_carlo_test.jl") end + @time @safetestset "Split Coupled Tests" begin include("InterfaceI/splitcoupled.jl") end + @time @safetestset "SSA Tests" begin include("InterfaceI/ssa_tests.jl") end + @time @safetestset "Tau Leaping Tests" begin include("InterfaceI/regular_jumps.jl") end + @time @safetestset "Simple SSA Callback Test" begin include("InterfaceI/ssa_callback_test.jl") end + @time @safetestset "SIR Discrete Callback Test" begin include("InterfaceI/sir_model.jl") end + @time @safetestset "Callback Merging Tests" begin include("InterfaceI/callbacks.jl") end + @time @safetestset "Linear Reaction SSA Test" begin include("InterfaceI/linearreaction_test.jl") end + @time @safetestset "Mass Action Jump Tests; Gene Expr Model" begin include("InterfaceI/geneexpr_test.jl") end + @time @safetestset "Mass Action Jump Tests; Nonlinear Rx Model" begin include("InterfaceI/bimolerx_test.jl") end + @time @safetestset "Mass Action Jump Tests; Special Cases" begin include("InterfaceI/degenerate_rx_cases.jl") end + @time @safetestset "Mass Action Jump Tests; Floating Point Inputs" begin include("InterfaceI/fp_unknowns.jl") end + @time @safetestset "scale_rates Field Tests" begin include("InterfaceI/scale_rates_field_test.jl") end + @time @safetestset "Direct allocations test" begin include("InterfaceI/allocations.jl") end + @time @safetestset "Bracketing Tests" begin include("InterfaceI/bracketing.jl") end + @time @safetestset "Composition-Rejection Table Tests" begin include("InterfaceI/table_test.jl") end + @time @safetestset "Extinction test" begin include("InterfaceI/extinction_test.jl") end + return nothing + end, + "InterfaceII" => function () + @time @safetestset "Saveat Regression test" begin include("InterfaceII/saveat_regression.jl") end + @time @safetestset "Save_positions test" begin include("InterfaceII/save_positions.jl") end + @time @safetestset "Ensemble Uniqueness test" begin include("InterfaceII/ensemble_uniqueness.jl") end + @time @safetestset "Thread Safety test" begin include("InterfaceII/thread_safety.jl") end + @time @safetestset "Ensemble Problem Tests" begin include("InterfaceII/ensemble_problems.jl") end + @time @safetestset "A + B <--> C" begin include("InterfaceII/reversible_binding.jl") end + @time @safetestset "Remake tests" begin include("InterfaceII/remake_test.jl") end + @time @safetestset "ExtendedJumpArray remake tests" begin include("InterfaceII/extended_jump_array_remake.jl") end + @time @safetestset "Symbol based problem indexing" begin include("InterfaceII/jprob_symbol_indexing.jl") end + @time @safetestset "Long time accuracy test" begin include("InterfaceII/longtimes_test.jl") end + @time @safetestset "Hawkes process" begin include("InterfaceII/hawkes_test.jl") end + @time @safetestset "Reaction rates" begin include("InterfaceII/reaction_rates.jl") end + @time @safetestset "Hop rates" begin include("InterfaceII/hop_rates.jl") end + @time @safetestset "Topology" begin include("InterfaceII/topology.jl") end + @time @safetestset "Spatial bracketing Tests" begin include("InterfaceII/bracketing.jl") end + @time @safetestset "Spatial A + B <--> C" begin include("InterfaceII/ABC.jl") end + @time @safetestset "Spatially Varying Reaction Rates" begin include("InterfaceII/spatial_majump.jl") end + @time @safetestset "Pure diffusion" begin include("InterfaceII/diffusion.jl") end + return nothing + end, + "CUDA" => function () + activate_gpu_env() + @time @safetestset "GPU Tau Leaping test" begin include("gpu/regular_jumps.jl") end + return nothing + end, + "Correctness" => function () + activate_gpu_env() + return nothing + end, + ), + qa = joinpath(@__DIR__, "qa", "qa.jl"), + all = ["InterfaceI", "InterfaceII"], +) diff --git a/test/spatial/run_spatial_tests.jl b/test/shared/run_spatial_tests.jl similarity index 100% rename from test/spatial/run_spatial_tests.jl rename to test/shared/run_spatial_tests.jl