- Add star application
- Add vsearch application
- Add rseqc application
- Separate qualimap pe and se output (#12)
- Add mapdamage2 (#11)
- Fix mapdamage2 missing output (#18)
- Use realpath to determine download url (#17)
- Rename download_ngsfixtures_data.py to pytest_ngsfixtures_download_data.py
- Add picard output data
- Add functions for dealing with application fixtures
- Move docs to gh-pages
- Add pytest_ngsfixtures_add_application.py for templating new applications
- Application outputs now implemented as dictionaries for multiple-output applications
Defer download to script, minor bug fixes
- Add application_fixtures to config module
- Fix sample_alias bug (#4)
- Add script download_ngsfixtures_data.py for manual download of data (#5)
Add application data, pool data, and functions for downloading data
- Add application data for cutadapt, fastqc, qualimap and samtools
- Add pooled sequencing data
- Add functionality for downloading large data sets
- Improve make targets for easier releases
- Minor bug fixes
Add new reference files, test files, and factory functions.
- Use snakemake instead of make to generate data files
- Add separate test file for factory functions
- Add scaffold file with randomly inserted N's
- Improve safe_symlink
- Add threads options for running tests
- Add Snakefile and rules for generating application files
- Add fileset, filetype factory functions
- First release on PyPI.