The current spec for mixins doesn't support dashboards folders, which need to be specified in the dashboard provisioning YAML: http://docs.grafana.org/administration/provisioning/#dashboards
I suggest we add a new top-level field, dashboardFolders, which is of type map[folder name]map[dashboard filename]dashboard if you get what I mean.
Integrations can then take care of provisioning the yamls etc to put these into folders. Existing integrations can make this backwards compatible by lifting this all back into the dashboards key.
WDYT @metalmatze @brancz