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samtools/depth process generate a huge tsv file > 40Gb for a 30X cram file.
The only infos we need is the mean depth, that is already obtained with samtools/coverage.
We should avoid this module.
Description of feature
samtools/depthprocess generate a huge tsv file > 40Gb for a 30X cram file.The only infos we need is the mean depth, that is already obtained with
samtools/coverage.We should avoid this module.