Skip to content

Reorganise and rename tests#292

Merged
LouisLeNezet merged 4 commits into
nf-core:devfrom
LouisLeNezet:test_names
May 25, 2026
Merged

Reorganise and rename tests#292
LouisLeNezet merged 4 commits into
nf-core:devfrom
LouisLeNezet:test_names

Conversation

@LouisLeNezet
Copy link
Copy Markdown
Collaborator

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • If necessary, also make a PR on the nf-core/phaseimpute branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@LouisLeNezet LouisLeNezet self-assigned this May 20, 2026
@LouisLeNezet LouisLeNezet changed the base branch from main to dev May 20, 2026 19:49
@LouisLeNezet LouisLeNezet requested a review from atrigila May 21, 2026 07:33
Copy link
Copy Markdown
Collaborator

@atrigila atrigila left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I don't understand the changes very well. They seem to be the same but the order of the things has been changed?

Image

@LouisLeNezet
Copy link
Copy Markdown
Collaborator Author

They seem to be the same but the order of the things has been changed?

This is indeed the aim.
I wanted standardise and alphabetically ordered nf-test names so that nf-test stop reorder them when you launch it with --update-snapshot.

@LouisLeNezet LouisLeNezet merged commit 0b54a87 into nf-core:dev May 25, 2026
22 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants