From 9836f580754ff12c854c69854d555f2ec012b679 Mon Sep 17 00:00:00 2001
From: Katharine Chen <43553196+kychen37@users.noreply.github.com>
Date: Thu, 31 Aug 2023 14:27:33 -0700
Subject: [PATCH] add htseq and scipy

for publication code snakemakes
---
 Dockerfile | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index 9ef30a7..373d221 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -22,7 +22,9 @@ RUN mamba install -y -c conda-forge -c bioconda \
     plotnine \
     seaborn \
     regex \
-    snakemake-minimal
+    snakemake-minimal \
+    htseq
 
-RUN mamba install -y -c conda-forge altair
+RUN mamba install -y -c conda-forge altair \
+    scipy
 RUN pip install skimpy