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igvwebConfig.js
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36 lines (34 loc) · 1.35 KB
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var igvwebConfig = {
genomes: "resources/genomes.json",
trackRegistryFile: "resources/tracks/trackRegistry.json",
//clientId: "848618608589-8s3dkha1lhh2gh5isgf7d2376e0ngkp3.apps.googleusercontent.com",
igvConfig:
{
genomeList: "resources/genomes.json",
queryParametersSupported: true,
showChromosomeWidget: true,
genome: "hg19",
showSVGButton: false,
search: {
url: "https://seqview.psu.edu/api/v1/suggest/?genome=$GENOME$&name=$FEATURE$&browser=IGV",
chromosomeField: "chr",
startField: "txStart",
endField: "txEnd",
},
//apiKey: "AIzaSyCQvcYRP0cWogQQA28iGX3mQMvpZPN5VQM",
tracks: [
// TODO -- add default tracks here. See github.com/igvteam/igv.js/wiki for details
// {
// name: "CTCF - string url",
// type: "wig",
// format: "bigwig",
// url: "https://www.encodeproject.org/files/ENCFF563PAW/@@download/ENCFF563PAW.bigWig"
// }
]
},
// Provide a URL shorterner function or object. This is optional. If not supplied
// sharable URLs will not be shortened .
urlShortener: {
provider: "tinyURL"
}
};