The Atkinson Lab at Baylor College of Medicine
Pinned Loading
Repositories
- Tractor-tutorial Public
A tutorial for running Tractor and Tractor-Mix on toy datasets, including step-by-step instructions for preparing data, estimating PCs and GRMs, and performing mixed-model association tests.
Atkinson-Lab/Tractor-tutorial’s past year of commit activity - Nextflow_GWAS_pipeline Public Forked from chrisrob3312/Nextflow_GWAS_pipeline
a nextflow pipeline to allow optional selection of various GWAS tools using a population-stratified approach followed by MR-MEGA or MR-MEGA-env meta-analysis
Atkinson-Lab/Nextflow_GWAS_pipeline’s past year of commit activity - TractorWorkflow Public
Nextflow pipeline for Tractor GWAS with customizable phasing, local ancestry inference (RFMix2, GNomix, FLARE), and regression modules.
Atkinson-Lab/TractorWorkflow’s past year of commit activity - Tractor-Mix-manuscript Public
Scripts for running simulations, and Tractor-Mix analysis for UKBB, and Yale-Penn cohort
Atkinson-Lab/Tractor-Mix-manuscript’s past year of commit activity - Post-QC Public
Post variant-calling QC pipeline for orienting cohort data with a reference file. Additional steps for merging and phasing with a reference panel.
Atkinson-Lab/Post-QC’s past year of commit activity
People
This organization has no public members. You must be a member to see who’s a part of this organization.
Top languages
Loading…
Most used topics
Loading…