add loading of an example dataset with image and seed layers #7
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Pull Request Overview
This PR adds functionality to load sample datasets (image and seed layers) for the CoTracker plugin, accessible via File > Open Sample > CoTracker sample menu in napari.
Key changes:
- Implements
load_sample_data()function that loads a chicken GIF from GitHub and corresponding seed points from a local CSV file - Updates napari.yaml to register the new sample data command and removes unused reader/writer plugin contributions
- Removes boilerplate reader and writer modules that were not being used
Reviewed Changes
Copilot reviewed 5 out of 5 changed files in this pull request and generated 8 comments.
Show a summary per file
| File | Description |
|---|---|
| src/napari_cotcotcot/napari.yaml | Updates command registration from make_sample_data to load_sample_data and removes unused reader/writer plugin registrations |
| src/napari_cotcotcot/_sample_data.py | Replaces placeholder implementation with functional code that downloads a GIF and loads seed points from CSV |
| src/napari_cotcotcot/data/Gallus_gallus_domesticus/seed_Chicken1.csv | Adds sample seed point data with time and spatial coordinates |
| src/napari_cotcotcot/_reader.py | Removes unused boilerplate reader module |
| src/napari_cotcotcot/_writer.py | Removes unused boilerplate writer module |
Comments suppressed due to low confidence (1)
src/napari_cotcotcot/_sample_data.py:11
- Import of 'urlretrieve' is not used.
from urllib.request import urlretrieve
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remove unnecessary import Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
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References and relevant issues
(#4)
Description
File > Open Sample > CoTracker sample (cotcotcot)
