BioMC Postprocessor API

Project Overview

The BioMC Postprocessor API is a Rust API designed to interact with and perform post-processing on simulation results obtained with the BioMC code.
It also includes PyO3 bindings to provide a high-level Python API for end users.

Structure

• Core
  • datamodel: Implementation to read HDF5 results files
  • process: for data manipulations and computations, enabling transformation of datasets.
  • lib: End-User API: Simplified methods for data extraction, processing, and visualization.
• Python Wrap
  • Rust bindings to be used in Python applications via PyO3, integrating Rust functionality with Python.
• biomc_pp
  • Python wrapper around Rust bindings, providing access to data processing and plotting functions.
• examples
  • Practical examples for integrating core functionality, bindings, and wrappers.

Features

• Retrieve pre-processed simulation results and parameters.
• Rust and Python integration for versatile usage.

Authors

• CASALE Benjamin

LICENSE

This code is under MIT license