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create new script to run napari and load detected PMCs

Status: Open.

#9 In BradhamLab/pmc_detection;

· dakota-hawkins opened on Feb 10, 2023

modify workflow to run directly after user input

Status: Open.

#8 In BradhamLab/pmc_detection;

· dakota-hawkins opened on Feb 10, 2023

modify run_napari.py to get required user parameters

Status: Open.

#7 In BradhamLab/pmc_detection;

· dakota-hawkins opened on Feb 10, 2023

get familiar with typer

Status: Open.

#6 In BradhamLab/pmc_detection;

· dakota-hawkins opened on Feb 10, 2023

get familiar with rich

Status: Open.

#5 In BradhamLab/pmc_detection;

· dakota-hawkins opened on Feb 10, 2023

get example embryo to practice with

Status: Open.

#4 In BradhamLab/pmc_detection;

· dakota-hawkins opened on Feb 10, 2023

clone repo on local computer

Status: Open.

#3 In BradhamLab/pmc_detection;

· dakota-hawkins opened on Feb 10, 2023

download vscode

Status: Open.

#2 In BradhamLab/pmc_detection;

· dakota-hawkins opened on Feb 10, 2023

get familiar with snakemake

Status: Open.

#1 In BradhamLab/pmc_detection;

· dakota-hawkins opened on Feb 10, 2023