Discussions

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  Using MS2rescore after Comet

  medardus333 asked Jan 14, 2026 in Q&A · Unanswered

  

  

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  problem SAGE result reprocessing

  wraff asked Apr 4, 2025 in Q&A · Closed · Unanswered

  

  

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  Downstream analysis of MaxQuant phospho PSMs

  dh2305 asked Mar 5, 2025 in Q&A · Unanswered

  

  

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  Error rescoring sage and ddaPASEF file

  bsphinney asked Jan 17, 2025 in Q&A · Unanswered

  

  

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  which column to use for mokapot generated rescoring results?

  frankligy asked Sep 24, 2024 in Q&A · Closed · Answered

  

  

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  Default parameters in MS2 Rescore

  TheB1307 asked Aug 1, 2024 in Q&A · Answered

  

  

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  FlashLFQ output file

  TheB1307 started Aug 14, 2024 in General

  

  

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  Compatibility between MS²Rescore v3.1 and Sage >=v0.14.4, <v0.14.7 for direct Bruker raw file support

  RalfG started Aug 7, 2024 in General

  

  

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  Parameters for rescoring peptidomics data

  Dmorgen asked May 6, 2024 in Q&A · Answered

  

  

  

  

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  Tims2Rescore documentation

  pkohvaei asked Jul 15, 2024 in Q&A · Unanswered

  

  

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  MS2rescore for PeptideShaker ouput

  trinhxt asked Jun 2, 2023 in Q&A · Closed · Answered

  

  

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  Welcome to MS²Rescore Discussions!

  RalfG announced Feb 25, 2022 in Announcements

  

  

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