build(deps): bump linkml from 1.10.0 to 1.11.1

[dependabot]

Bumps linkml from 1.10.0 to 1.11.1.

Release notes

Sourced from linkml's releases.

v1.11.1

Note: This is a re-release of the v1.11.0-rc3 contents under the version 1.11.1. The previously published 1.11.0 was inadvertently built from main rather than the rc3 commit, and has been yanked from PyPI. 1.11.1 is byte-identical to v1.11.0-rc3.

Breaking changes

• For your documentation to render correctly, you need to now add attr_list and md_in_html to your mkdocs.yml, see for example here.

What's Changed

• Update Schedule on the Community-Meetings.md by @​sagehrke in linkml/linkml#3452
• Update Linkml docs with new Slack signup form by @​sagehrke in linkml/linkml#3455
• Fix enum.md.jinja2 so that it can correctly expand/render dynamic enum elements by @​sujaypatil96 in linkml/linkml#3469
• Update Community-Meetings.md with Guidelines for presenting by @​sagehrke in linkml/linkml#3460
• Trigger CI on merge_group events to unblock the merge queue by @​kevinschaper in linkml/linkml#3472
• build(deps): bump the github-actions group across 1 directory with 5 updates by @​dependabot[bot] in linkml/linkml#3470
• Use linkml.validator in linkml.utils.converter by @​sneakers-the-rat in linkml/linkml#2385
• terminusdb: updates to the modern schema format by @​philocalyst in linkml/linkml#3258
• feat(generators): add --xsd-anyuri-as-iri flag for cross-generator IRI consistency by @​jdsika in linkml/linkml#3292
• fix(jsonldcontextgen): emit scoped contexts for class-level range overrides by @​amc-corey-cox in linkml/linkml#3336
• fix(excelgen): move workbook.save outside loop by @​noelmcloughlin in linkml/linkml#3420
• Adding test for any_of at the class level. by @​cmungall in linkml/linkml#2292
• Update Metamodel files for 1.11.0-rc2 by @​matentzn in linkml/linkml#3484

New Contributors

• @​philocalyst made their first contribution in linkml/linkml#3258

Full Changelog: linkml/linkml@v1.11.0-rc2...v1.11.0-rc3

v1.11.0

linkml-lint note

• linkml-lint is now more strict about type validation in schema files. The Python runtime still coerces many shorthand forms at load time, but schemas that previously passed linkml-lint may now fail type checks. Some specific patterns:
  • Multivalued slots must be YAML lists. Bare scalar shorthands under comments, notes, in_subset, see_also, aliases, the *_mappings family, and other multivalued metamodel slots are no longer accepted — you'll need to wrap them in a list.
  • deprecated is a string, not a boolean. The slot is defined to carry a human-readable reason for deprecation. To mark an element deprecated without a reason, it works to use a quoted string (e.g. deprecated: "true") — a bare value that yaml coerces to a boolean will fail the type check.
  • examples.value must be a string. Use examples.value for the canonical textual representation of an example. Non-string examples (mappings, numbers, booleans, nested objects) belong under examples.object.

What's Changed

• Fix induced_slot setting alias equal to slot name by @​kevinschaper in linkml/linkml#3135
• fix: skip subproperty_of Literal expansion when range is class or enum by @​vladistan in linkml/linkml#3185
• Feature: Improve YARRRML generator object semantics & inline handling by @​lapkinvladimir in linkml/linkml#3131
• feat(plantumlgen): enum rendering, --all flag, format fix, mixin improvements by @​mgskjaeveland in linkml/linkml#3201
• mark more tests that use the metamodel as slow by @​sneakers-the-rat in linkml/linkml#3210
• Emit URIRef for xsd:anyURI values in RDF serialization by @​amc-corey-cox in linkml/linkml#3221
• Use vendored JSON-LD context in generators by @​amc-corey-cox in linkml/linkml#3224
• fix(owlgen): implement children_are_mutually_disjoint by @​mgskjaeveland in linkml/linkml#3187
• Submit releases to the LinkML Zenodo community by @​dalito in linkml/linkml#3206
• Add configurable list formatting for CSV/TSV serialization by @​turbomam in linkml/linkml#3134
• dont leave files open by @​sneakers-the-rat in linkml/linkml#3207
• build(deps): bump the github-actions group with 5 updates by @​dependabot[bot] in linkml/linkml#3232
• Add alumni section with contributors by @​matentzn in linkml/linkml#3195
• javagen: Represent boolean slots as Boolean-typed fields by default. by @​gouttegd in linkml/linkml#3178

... (truncated)

Commits

• a7ed3e4 Merge pull request #3484 from linkml/linkml-model-1.11.0rc2
• 6340cb0 Merge branch 'main' into linkml-model-1.11.0rc2
• 64f6a21 Adding test for any_of at the class level
• b6fdeca Source linkml model from raw github rather than PURL
• 2a10bb5 Update snapshots
• 79b2382 Update fixtures / tests
• 5e33f58 Update Metamodel files for 1.11.0-rc2
• 373cba1 Merge pull request #3420 from noelmcloughlin/excel
• 21cec18 Merge branch 'main' into excel
• 6285fa3 fix(jsonldcontextgen): emit scoped contexts for class-level range overrides
• Additional commits viewable in compare view

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