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Update notebooks#148

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JoYvBa wants to merge 45 commits intomainfrom
update_notebooks
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Update notebooks#148
JoYvBa wants to merge 45 commits intomainfrom
update_notebooks

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@JoYvBa JoYvBa commented Mar 9, 2026

Finalize mibitrans examples for documentation

@JoYvBa JoYvBa added this to the Version 1.0 milestone Mar 9, 2026
@JoYvBa JoYvBa added this to MIBIREM Mar 9, 2026
@AlrauneZ AlrauneZ self-assigned this Mar 16, 2026
@AlrauneZ AlrauneZ linked an issue Mar 16, 2026 that may be closed by this pull request
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JoYvBa commented Mar 20, 2026

@AlrauneZ Great work on the notebooks! I have fixed the linting issues and merged your work with mine. If you pull from this branch you should get the updated version without any issues. Also, example_mibitrans_anatrans now contains the diversity model comparison figure we discussed last Monday.

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Add standard visualization for source depletion

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