text-query

A FastMCP server.

Setup

Install dependencies using uv:

uv sync

Development

Run the server in development mode:

uv run src/server.py

Usage

Add to your Claude Desktop configuration file at ~/Library/Application Support/Claude/claude_desktop_config.json:

{
  "mcpServers": {
    "microbiome-query": {
      "command": "/Users/YOUR_USERNAME/.local/bin/uv",
      "args": [
        "--directory",
        "/path/to/text-query",
        "run",
        "src/server.py"
      ]
    }
  }
}

Replace:

• YOUR_USERNAME with your actual username
• /path/to/text-query with the full path to this repository

Find the full path to uv with:

which uv

After updating the config, restart Claude Desktop.