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fix baseline migration script #2515

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p-hoffmann merged 1 commit into from
May 18, 2026
Merged

fix baseline migration script #2515

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138 changes: 71 additions & 67 deletions src/main/resources/db/migration/postgresql/B3.0.0__webapi_baseline.sql
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Original file line number Diff line number Diff line change
Expand Up @@ -1130,73 +1130,9 @@ CREATE TABLE ${ohdsiSchema}.sec_source

-- END sec_{entity} tables

-- FK constraints for sec_{entity} tables: role and entity references.
-- Both FKs use ON DELETE CASCADE: deleting a role or a parent entity automatically
-- removes its permission grants in the corresponding sec_* table.

ALTER TABLE ${ohdsiSchema}.sec_cohort_characterization
ADD CONSTRAINT fk_scc_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_scc_cohort_characterization_id
FOREIGN KEY (cohort_characterization_id) REFERENCES ${ohdsiSchema}.cohort_characterization(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_cohort_definition
ADD CONSTRAINT fk_scd_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_scd_cohort_definition_id
FOREIGN KEY (cohort_definition_id) REFERENCES ${ohdsiSchema}.cohort_definition(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_concept_set
ADD CONSTRAINT fk_scs_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_scs_concept_set_id
FOREIGN KEY (concept_set_id) REFERENCES ${ohdsiSchema}.concept_set(concept_set_id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_fe_analysis
ADD CONSTRAINT fk_sfa_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_sfa_fe_analysis_id
FOREIGN KEY (fe_analysis_id) REFERENCES ${ohdsiSchema}.fe_analysis(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_ir_analysis
ADD CONSTRAINT fk_sia_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_sia_ir_analysis_id
FOREIGN KEY (ir_id) REFERENCES ${ohdsiSchema}.ir_analysis(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_pathway_analysis
ADD CONSTRAINT fk_spa_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_spa_pathway_analysis_id
FOREIGN KEY (pathway_analysis_id) REFERENCES ${ohdsiSchema}.pathway_analysis(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_reusable
ADD CONSTRAINT fk_sr_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_sr_reusable_id
FOREIGN KEY (reusable_id) REFERENCES ${ohdsiSchema}.reusable(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_source
ADD CONSTRAINT fk_ss_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_ss_source_id
FOREIGN KEY (source_id) REFERENCES ${ohdsiSchema}.source(source_id)
ON DELETE CASCADE;
-- NOTE: FK constraints for the sec_{entity} tables above are declared further
-- down (search for "fk_scc_sec_role_id") because they reference primary keys
-- on sec_role and other tables that are not added until later in this script.
Comment on lines +1134 to +1135

CREATE TABLE ${ohdsiSchema}.sec_session
(
Expand Down Expand Up @@ -1790,6 +1726,74 @@ ALTER TABLE ONLY ${ohdsiSchema}.sec_user_role
ALTER TABLE ONLY ${ohdsiSchema}.sec_user_role
ADD CONSTRAINT fk_user_role_to_user FOREIGN KEY (user_id) REFERENCES ${ohdsiSchema}.sec_user(id);

-- FK constraints for sec_{entity} tables: role and entity references.
-- Both FKs use ON DELETE CASCADE: deleting a role or a parent entity automatically
-- removes its permission grants in the corresponding sec_* table.

ALTER TABLE ${ohdsiSchema}.sec_cohort_characterization
ADD CONSTRAINT fk_scc_sec_role_id
Comment on lines +1733 to +1734
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_scc_cohort_characterization_id
FOREIGN KEY (cohort_characterization_id) REFERENCES ${ohdsiSchema}.cohort_characterization(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_cohort_definition
ADD CONSTRAINT fk_scd_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_scd_cohort_definition_id
FOREIGN KEY (cohort_definition_id) REFERENCES ${ohdsiSchema}.cohort_definition(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_concept_set
ADD CONSTRAINT fk_scs_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_scs_concept_set_id
FOREIGN KEY (concept_set_id) REFERENCES ${ohdsiSchema}.concept_set(concept_set_id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_fe_analysis
ADD CONSTRAINT fk_sfa_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_sfa_fe_analysis_id
FOREIGN KEY (fe_analysis_id) REFERENCES ${ohdsiSchema}.fe_analysis(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_ir_analysis
ADD CONSTRAINT fk_sia_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_sia_ir_analysis_id
FOREIGN KEY (ir_id) REFERENCES ${ohdsiSchema}.ir_analysis(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_pathway_analysis
ADD CONSTRAINT fk_spa_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_spa_pathway_analysis_id
FOREIGN KEY (pathway_analysis_id) REFERENCES ${ohdsiSchema}.pathway_analysis(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_reusable
ADD CONSTRAINT fk_sr_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_sr_reusable_id
FOREIGN KEY (reusable_id) REFERENCES ${ohdsiSchema}.reusable(id)
ON DELETE CASCADE;

ALTER TABLE ${ohdsiSchema}.sec_source
ADD CONSTRAINT fk_ss_sec_role_id
FOREIGN KEY (role_id) REFERENCES ${ohdsiSchema}.sec_role(id)
ON DELETE CASCADE,
ADD CONSTRAINT fk_ss_source_id
FOREIGN KEY (source_id) REFERENCES ${ohdsiSchema}.source(source_id)
ON DELETE CASCADE;

ALTER TABLE ONLY ${ohdsiSchema}.source
ADD CONSTRAINT source_created_by_id_fkey FOREIGN KEY (created_by_id) REFERENCES ${ohdsiSchema}.sec_user(id);

Expand Down
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