Fixes Contribution from Justin#1

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YccYeung wants to merge 2 commits intoScioShield:masterfrom

YccYeung:small_fixes

Commits on Feb 28, 2026

Made some small changes in encoder.py to make it more verbose
YccYeung
committed

Commits on Mar 1, 2026

Redirect output files to directories for better file management, add simple step mode for viewing decode process one step at a time
YccYeung
committed