Skip to content

Pull requests: StamLab/stampipes

New pull request New
11 Open 67 Closed
11 Open 67 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

feat: write bcl2fastq output directly to /flowcells/, eliminating 3TB cross-filesystem rsync
#82 opened Mar 26, 2026 by jemma-nelson Loading…
5
Feat/containerize dnase
#81 opened Oct 17, 2025 by jemma-nelson • Draft
Bump cryptography from 2.1.4 to 41.0.3 dependencies Pull requests that update a dependency file
#70 opened Aug 1, 2023 by dependabot bot Loading…
Bump scipy from 1.1.0 to 1.10.0 dependencies Pull requests that update a dependency file
#67 opened Jul 6, 2023 by dependabot bot Loading…
Bump pyxdg from 0.25 to 0.26 dependencies Pull requests that update a dependency file
#64 opened May 9, 2023 by dependabot bot Loading…
Bump numpy from 1.14.5 to 1.22.0 dependencies Pull requests that update a dependency file
#63 opened May 9, 2023 by dependabot bot Loading…
Create README.md
#60 opened May 8, 2023 by gsc-altius Loading…
Remove Anaquin from RNA-seq processing
#59 opened Mar 21, 2023 by jemma-nelson Loading…
1
Draft: Update feat/dnase-2.7 with changes from main
#58 opened Nov 28, 2022 by jemma-nelson • Draft
1
DRAFT: Feat/workdir cleanup and locking
#50 opened Oct 3, 2021 by fwip Loading…
2 of 4 tasks
ATAC focused process
#39 opened Jul 3, 2019 by akjohnson Loading…
ProTip! Filter pull requests by the default branch with base:main.