Search results

Failed installation in Linux (Ubuntu 24.04.1 LTS)

Status: Open.

#206 In fatipardo/PDBCleanV2;

· mpalo110 opened on May 8, 2026

Add Q-score to summary dataframe

enhancementNew feature or requestNew feature or request

Status: Open.

#203 In fatipardo/PDBCleanV2;

· fatipardo opened on May 5, 2026

Structures don't display correctly in ChimeraX

Status: Open.

#202 In fatipardo/PDBCleanV2;

· gdkwxn opened on May 5, 2026

Residue renumbering: gap tracker > len(gap_letter)

Status: Open.

#201 In fatipardo/PDBCleanV2;

· fatipardo opened on Mar 20, 2026

Add MMSEQS2 to INTEL environment

enhancementNew feature or requestNew feature or request

Status: Open.

#187 In fatipardo/PDBCleanV2;

· fatipardo opened on Sep 12, 2025

chain ID assignment issue in scr/pdbcleanmolidcifutils.py

bugSomething isn't workingSomething isn't working

Status: Open.

#136 In fatipardo/PDBCleanV2;

· gdkwxn opened on Aug 25, 2024

Notebook 2.1 Menu Options

Status: Open.

#98 In fatipardo/PDBCleanV2;

· Liv-Weiner opened on Jul 18, 2024

cleanutils simplify step fails when structure hasn't been published

bugSomething isn't workingSomething isn't working

Status: Open.

#86 In fatipardo/PDBCleanV2;

· fatipardo opened on Aug 17, 2023

Step 2 Tutorial TSV

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#80 In fatipardo/PDBCleanV2;

· Liv-Weiner opened on Jun 22, 2023

2.2 Notebook

bugSomething isn't workingSomething isn't working

Status: Open.

#68 In fatipardo/PDBCleanV2;

· Liv-Weiner opened on Apr 14, 2023

Update Step2.2.AssignMolIDToEntitiesFoindInCIFfiles2.ipynb for new code version

bugSomething isn't workingSomething isn't working

Status: Open.

#66 In fatipardo/PDBCleanV2;

· fatipardo opened on Apr 6, 2023

Running Step 4

bugSomething isn't workingSomething isn't working

Status: Open.

#65 In fatipardo/PDBCleanV2;

· Liv-Weiner opened on Apr 1, 2023