There are three versions, include MACOS,LIUNX，Windows，please choose the one that suits you.
1.Download source code from github by running:
git clone https://github.com/LiuLab-CSRC/SSBONDPredict.git
2.Enter the directory where predict is located ,then run predict by:
predict 'pdbfile' 'the position of SSBONDPredict' 'the path of outpath'
For example,if you choose MACOS version and you download the SSBONDPredict in your Desktop, after enter the directory of macpredict you can run macpredict like this:
macpredict /root/Desktop/3irq.pdb /root/Desktop ./
If you want choose liunx version,you need to install docker first,you can do like this:
docker pull ubuntu
then Using the ubuntu image to start a container,and enter the container in command line mode:
docker run -it ubuntu /bin/bash
then run liunxpredict in the container as above Usage. For example:
liunxpredict /root/users/test/Desktop/3irq.pdb /root/users/test/Desktop ./