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22 changes: 22 additions & 0 deletions Schaefer2018-12m/README.md
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# Schaefer2018-12m Data Directory

This directory contains structural connectome data using the Schaefer 2018 atlas with 400 parcels (12 months).

## Expected File Format

This directory should contain TSV (tab-separated values) files in the format:
- `sub-{ID}_Schaefer2018-12m.tsv`

Each file should be a 400x400 matrix representing structural connectivity between brain regions for individual subjects.

## Usage

This data directory is used by the following scripts:
1. `1) Merge_All_Shaeffler.py` - Merges all subject data
2. `2) Indivudual visualization of binarized shaeffler.py` - Visualizes individual patient connectomes
3. `3) Create Group_Sum_Binarized_Schaefer400.py` - Creates group-level summaries
4. `5) Check_ROI_Regions.py` - Checks ROI region mappings

## Data Source

Place your Schaefer atlas connectivity matrices here before running the analysis scripts.