Search results

Speed up path-graph association using the new mapping of node names to objects

performance

Status: Open.

#305 In marbl/MetagenomeScope;

· fedarko opened on Jan 7, 2026

Allow frayed rope and bipartite patterns inside bubbles?

decompositionRelated to the pattern decomposition procedureRelated to the pattern decomposition procedure

lowpriorityfeature

Status: Open.

#303 In marbl/MetagenomeScope;

· fedarko opened on Jan 6, 2026

Put on bioconda

administrativeUsually non-code-related issues we need to take care ofUsually non-code-related issues we need to take care of

Status: Open.

#302 In marbl/MetagenomeScope;

· fedarko opened on Jan 6, 2026

Adjust selected node/edge/pattern tables to halve/ignore split node and fake edge counts

lowpriorityfeature

refactoring

Status: Open.

#301 In marbl/MetagenomeScope;

· fedarko opened on Jan 4, 2026

Selectively downgrade edge curve-styles based on the layout

layoutgraph drawing / layoutgraph drawing / layout

performance

Status: Open.

#300 In marbl/MetagenomeScope;

· fedarko opened on Jan 4, 2026

While focused on the cc size rank input (or the distance input), make pressing up/down on the keyboard increase/decrease the number

lowpriorityfeature

Status: Open.

#299 In marbl/MetagenomeScope;

· fedarko opened on Jan 3, 2026

Support copying node names, etc. from selected element info tables

accessibilityIssues pertaining to accessibility (e.g. colorblindness, epilepsy)Issues pertaining to accessibility (e.g. colorblindness, epilepsy)

lowpriorityfeature

Status: Open.

#298 In marbl/MetagenomeScope;

· fedarko opened on Jan 2, 2026

Make drawing around nodes ignore hops between split nodes

layoutgraph drawing / layoutgraph drawing / layout

lowpriorityfeature

Status: Open.

#296 In marbl/MetagenomeScope;

· fedarko opened on Jan 2, 2026

Add ability to click on a node / edge / pattern in the "selected" tables and zoom in on it

lowpriorityfeature

Status: Open.

#295 In marbl/MetagenomeScope;

· fedarko opened on Jan 2, 2026

Adjust loop edge control point step size based on node width

externalBugs / issues with other libraries/dependenciesBugs / issues with other libraries/dependencies

highpriorityfeature

layoutgraph drawing / layoutgraph drawing / layout

Status: Open.

#294 In marbl/MetagenomeScope;

· fedarko opened on Jan 2, 2026

Support filtering nodes / edges by coverage

assemblersMaintaining compatibility with certain assemblers, showing unique information, etcMaintaining compatibility with certain assemblers, showing unique information, etc

highpriorityfeature

refactoring

Status: Open.

#293 In marbl/MetagenomeScope;

· fedarko opened on Jan 1, 2026

Show information about length units somewhere?

assemblersMaintaining compatibility with certain assemblers, showing unique information, etcMaintaining compatibility with certain assemblers, showing unique information, etc

documentation

question

Status: Open.

#292 In marbl/MetagenomeScope;

· fedarko opened on Dec 31, 2025