Releases: mcvickerlab/GenVarLoader
Releases · mcvickerlab/GenVarLoader
0.21.2
17 Mar 17:33
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0.21.2 (2026-03-17)
Fix
repeated subset_to
bump genoray
[main b8cd5fe ] bump: version 0.21.1 → 0.21.2
2 files changed, 8 insertions(+), 1 deletion(-)
0.21.1
09 Mar 16:45
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0.21.1 (2026-03-09)
Fix
[main 3f05c5a ] bump: version 0.21.0 → 0.21.1
2 files changed, 7 insertions(+), 1 deletion(-)
0.21.0
26 Feb 01:25
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0.21.0 (2026-02-26)
Feat
add option to extend lengths or not for gvl.write() fix: contig normalization
Fix
add cli as optional dependency
[main b22275b ] bump: version 0.20.0 → 0.21.0
2 files changed, 11 insertions(+), 1 deletion(-)
0.20.0
05 Feb 04:14
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0.20.0 (2026-02-05)
Feat
support python 3.13
upgrade to genoray 2
Fix
[main 7df3090 ] bump: version 0.19.1 → 0.20.0
2 files changed, 12 insertions(+), 1 deletion(-)
0.19.1
20 Dec 18:55
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0.19.1 (2025-12-20)
Fix
perf : upgrade genoray for (much) faster writes. test: idempotent fixutres in test_ds_haps
[main e41f7f7 ] bump: version 0.19.0 → 0.19.1
2 files changed, 7 insertions(+), 1 deletion(-)
0.19.0
03 Dec 03:05
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0.19.0 (2025-12-03)
Feat
allow subsetting by region name. fix: convert eligible ak.Array to sp.rag.Ragged for gvl.RaggedVariants whenever possible
[main babe777 ] bump: version 0.18.3 → 0.19.0
2 files changed, 7 insertions(+), 1 deletion(-)
0.18.3
09 Nov 04:27
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0.18.3 (2025-11-09)
Fix
perf : faster reverse complementing
[main 0690647 ] bump: version 0.18.2 → 0.18.3
2 files changed, 7 insertions(+), 1 deletion(-)
0.18.2
03 Nov 04:28
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0.18.2 (2025-11-03)
Fix
correctly parse and load variant fields (skip duplicates)
use ak.str.length instead of ak.num to get ref and alt lengths. docs: shape docstring
[main c1900e9 ] bump: version 0.18.1 → 0.18.2
2 files changed, 8 insertions(+), 1 deletion(-)
0.18.1
23 Oct 06:21
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0.18.1 (2025-10-23)
Fix
track file format version
[main 877b6d4 ] bump: version 0.18.0 → 0.18.1
2 files changed, 7 insertions(+), 1 deletion(-)
0.18.0
22 Oct 05:19
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0.18.0 (2025-10-22)
Feat
make RaggedVariants an Awkward Array subclass supporting arbitrary additional fields.
[main 27420c0 ] bump: version 0.17.0 → 0.18.0
2 files changed, 7 insertions(+), 1 deletion(-)