first draft diagram

[rugeli]

BEFORE: Original Server Workflow

graph TD
    A[Client Request] --> B[POST /start-packing]
    B --> C{Check recipe param}
    C -->|Missing| D[Return 400 Error]
    C -->|Present| E[Generate UUID for job_id]
    E --> F[Create Background Task]
    F --> G[Return job_id immediately]
    F --> H[run_packing with recipe path]
    H --> I[pack with docker enabled]
    I --> J[Load recipe from file path]
    J --> K[Execute packing]
    K --> L{Packing succeeds?}
    L -->|Success| M[S3: Upload outputs to S3]
    L -->|Failure| N[Firebase: Update job status to FAILED]
    
    style A fill:#e1f5fe
    style G fill:#c8e6c9
    style M fill:#fff3e0
    style N fill:#ffcdd2

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AFTER: Enhanced Server Workflow with JSON Recipe Support

graph TD
    A[Client Request] --> B[POST /start-packing]
    B --> C{Check inputs}
    C -->|No recipe param + No body| D[Return 400 Error]
    C -->|Has recipe param + config| E[Generate UUID for job_id]
    C -->|Has JSON body + config| F[Generate hash from JSON]
    F --> G{Job exists?}
    G -->|Yes| H[Return existing job_id]
    G -->|No| I[Use hash as job_id]
    E --> J[Create Background Task]
    I --> J
    J --> K[Return job_id immediately]
    J --> L[pack with docker enabled and hash]
    L --> M{Input type?}
    M -->|Recipe path| N[Load recipe from file path]
    M -->|JSON body| O[Load recipe from JSON dict]
    N --> P[Execute packing in pack function]
    O --> P
    P --> Q{Packing succeeds?}
    Q -->|Success| R[S3: Upload outputs to S3]
    Q -->|Failure| S[Firebase: Update job status to FAILED]
    
    style A fill:#e1f5fe
    style K fill:#c8e6c9
    style R fill:#fff3e0
    style S fill:#ffcdd2
    style G fill:#ffeb3b
    style H fill:#4caf50

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[github-actions]

Packing analysis report

Analysis for packing results located at cellpack/tests/outputs/test_spheres/spheresSST

Ingredient name	Encapsulating radius	Average number packed
ext_A	25	236.0

Packing image

Distance analysis

Expected minimum distance: 50.00
Actual minimum distance: 50.01

Ingredient key	Pairwise distance distribution
ext_A