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5 repositories

pathweb
Public
0•0•0•0•Updated Dec 12, 2025Dec 12, 2025
Thor
Public
Cell level integrated analysis of tissue histology and spatial transcriptomics
Jupyter Notebook
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BSD 3-Clause "New" or "Revised" License
•6•32•2•0•Updated Oct 6, 2025Oct 6, 2025
Loki
Public
A visual–omics foundation model to bridge histopathology with spatial transcriptomics
Python
•13•136•3•0•Updated Jun 3, 2025Jun 3, 2025
cellDancer
Public
Predict RNA velocity through deep learning
transcriptomics single-cell-genomics single-cell-rna-seq
transcriptomics single-cell-genomics single-cell-rna-seq rna-velocity-estimation rna-velocity cell-fate rna-splicing rna-splicing-analysis
Jupyter Notebook
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BSD 3-Clause "New" or "Revised" License
•12•73•20•0•Updated Dec 12, 2023Dec 12, 2023
cellDancer_website
Public
Python
•
BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated May 22, 2023May 22, 2023

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