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@portugueslab

Portugues lab

Portugues Lab | Sensorimotor control | Cornell University

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  1. stytra stytra Public

    A modular package to control stimulation and track behaviour

    Python 47 30

  2. bouter bouter Public

    Python 1 2

  3. fimpy fimpy Public

    Python 1 1

  4. sashimi sashimi Public

    Lightsheet control

    Python 1 5

  5. arrayqueues arrayqueues Public

    Multiprocessing queues for numpy arrays using shared memory

    Python 60 8

  6. split_dataset split_dataset Public

    A minimal package for saving and reading large HDF5-based chunked arrays.

    Python 15

Repositories

Showing 10 of 52 repositories
  • Tanaka_2025_landmark Public

    Code to reproduce the analysis in the landmark anchoring paper

    portugueslab/Tanaka_2025_landmark’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 3, 2025
  • Tanaka_2025_hysteresis Public

    Code to replicate the analyses presented in the manuscript Tanaka & Portugues (2025) Algorithmic dissection of optic flow memory in larval zebrafish.

    portugueslab/Tanaka_2025_hysteresis’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 28, 2025
  • Lavian_et_al_2025 Public

    Analysis of zebrafish calcium imaging data for representation of visual information for navigation

    portugueslab/Lavian_et_al_2025’s past year of commit activity
    Jupyter Notebook 1 MIT 1 0 0 Updated Jul 4, 2025
  • Paoli_et_al_2025 Public
    portugueslab/Paoli_et_al_2025’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 27, 2025
  • Koetter-et-al-fin Public

    Code for Data Processing and Figure Generation for Koetter et al. 2025

    portugueslab/Koetter-et-al-fin’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 9, 2025
  • sashimi Public

    Lightsheet control

    portugueslab/sashimi’s past year of commit activity
    Python 1 GPL-3.0 5 30 (1 issue needs help) 8 Updated Mar 5, 2025
  • fimpy Public
    portugueslab/fimpy’s past year of commit activity
    Python 1 1 6 2 Updated Dec 24, 2024
  • flammkuchen Public Forked from uchicago-cs/deepdish

    Flexible HDF5 saving/loading library forked from deepdish (University of Chicago) and maintained by the Portugues lab

    portugueslab/flammkuchen’s past year of commit activity
    Python 16 BSD-3-Clause 66 2 0 Updated Dec 6, 2024
  • stytra Public

    A modular package to control stimulation and track behaviour

    portugueslab/stytra’s past year of commit activity
    Python 47 GPL-3.0 30 32 5 Updated Nov 8, 2024
  • brunoise Public

    2-photon scanning software in Python

    portugueslab/brunoise’s past year of commit activity
    Python 5 GPL-3.0 2 22 4 Updated Sep 13, 2024
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