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Endless loop in perform_reactome_analysis

Status: Open.

#95 In reactome/ReactomeGSA;

· jan-joh opened on Jun 19, 2026

Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘analyse_sc_clusters’ for signature ‘"missing"’

Status: Open.

#91 In reactome/ReactomeGSA;

· D201881403 opened on Mar 1, 2025

Timeout was reached: [gsa.reactome.org] SSL/TLS connection timeout

Status: Open.

#89 In reactome/ReactomeGSA;

· cdkodira opened on Oct 15, 2024

R Client for Ribo Seq data

Status: Open.

#87 In reactome/ReactomeGSA;

· alexgrent opened on Sep 6, 2024

How to solve this "sparse->dense coercion: allocating vector of size 17.3 GiB"

Status: Open.

#85 In reactome/ReactomeGSA;

· XjtuZhangKun-lab opened on Aug 30, 2024

sparse->dense coercion: allocating vector of size 17.3 GiB

Status: Open.

#84 In reactome/ReactomeGSA;

· XjtuZhangKun-lab opened on Aug 30, 2024

Add scRNA seq using pseudo bulk

Status: Open.

#81 In reactome/ReactomeGSA;

· alexgrent opened on Jun 24, 2024

Prepare for upcoming Seurat v5 release

Status: Open.

#80 In reactome/ReactomeGSA;

· Gesmira opened on Oct 3, 2023

ssGSEA FDR?

Status: Open.

#79 In reactome/ReactomeGSA;

· domi84 opened on Aug 10, 2023

plot_gsva_pathway label squished and how to assign specific color

Status: Open.

#78 In reactome/ReactomeGSA;

· camilla0801 opened on Jul 26, 2023

Create function for cluster-level pathway enrichment for scRNA-seq data

enhancementNew feature or requestNew feature or request

Status: Open.

#73 In reactome/ReactomeGSA;

· jgriss opened on Feb 22, 2023

Add support for group-wise comparison of scRNA-seq data

enhancementNew feature or requestNew feature or request

Status: Open.

#67 In reactome/ReactomeGSA;

· jgriss opened on Oct 2, 2022