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Improve adapter content warning documentation#189

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s-andrews merged 1 commit into
s-andrews:masterfrom
ehsanestaji:docs/improve-adapter-warning
May 20, 2026
Merged

Improve adapter content warning documentation#189
s-andrews merged 1 commit into
s-andrews:masterfrom
ehsanestaji:docs/improve-adapter-warning

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@ehsanestaji
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Clarifies the Adapter Content help page so the documented warning conditions match the implementation.

Changes:

  • Explain that warnings are raised when adapter, polyA, or polyG content exceeds 5% at any read position.
  • Document that a warning is also raised when reads are shorter than the longest configured adapter sequence.
  • Fix the Failure section wording so it says the module fails at the 10% threshold.

Validation:

  • xmllint --html --noout 'Help/3 Analysis Modules/10 Adapter Content.html'\n- git diff --check

@s-andrews s-andrews marked this pull request as ready for review May 20, 2026 14:41
@s-andrews s-andrews merged commit b6a82ec into s-andrews:master May 20, 2026
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