Fix CIF parsing failures for structures with numeric values and relative paths#39

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adobles96 wants to merge 8 commits intosteineggerlab:masterfrom

genesistherapeutics:master

Commits on Mar 25, 2026

fix: handle numeric values in CIF text fields (e.g. ligand code 919)

adobles96
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claude
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fix: parse '.' and '?' as text when followed by non-whitespace (pdbtbx-cif)

adobles96
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claude
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test: add unit tests for numeric CIF value handling and lexer edge cases

adobles96
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claude
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Commits on Mar 26, 2026

fix: don't truncate multi-char chain IDs in get_one_char

adobles96
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claude
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Commits on Mar 27, 2026

Commits on Mar 30, 2026