[Snyk] Security upgrade urllib3 from 2.0.7 to 2.6.0

[tomkat-cr]

Snyk has created this PR to fix 2 vulnerabilities in the pip dependencies of this project.

Snyk changed the following file(s):

• requirements.txt

⚠️ Warning

otebook 6.5.7 requires pyzmq, which is not installed.
jupyter-server 1.24.0 requires pyzmq, which is not installed.
jupyter-client 7.4.9 requires pyzmq, which is not installed.
ipykernel 6.16.2 requires pyzmq, which is not installed.

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• Some vulnerabilities couldn't be fully fixed and so Snyk will still find them when the project is tested again. This may be because the vulnerability existed within more than one direct dependency, but not all of the affected dependencies could be upgraded.

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[gemini-code-assist]

Summary of Changes

Hello @tomkat-cr, I'm Gemini Code Assist¹! I'm currently reviewing this pull request and will post my feedback shortly. In the meantime, here's a summary to help you and other reviewers quickly get up to speed!

This pull request, automatically created by Snyk, aims to enhance the project's security by upgrading the urllib3 dependency to version 2.6.0. This upgrade specifically targets and resolves two identified security vulnerabilities, ensuring a more secure and stable dependency chain for the project.

Highlights

• Security Fix: This pull request was automatically generated by Snyk to address and fix 2 identified security vulnerabilities.
• Dependency Upgrade: The urllib3 package has been upgraded from version 2.0.7 to 2.6.0 to mitigate the reported vulnerabilities.
• File Modified: The requirements.txt file was updated to reflect the new, pinned version of urllib3.
• Potential Warning: A warning is noted in the PR description regarding pyzmq not being installed, which is a dependency for several Jupyter components.

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[gemini-code-assist]

Code Review

This pull request from Snyk correctly upgrades urllib3 to version >=2.6.0 in the root requirements.txt to patch security vulnerabilities. While this change is good, I've identified a critical issue: another dependency file, batch_processing/raygun_ip_processing/requirements.txt, still pins urllib3 to version 2.2.2, which is likely still vulnerable. To fully resolve the security issue across the project, it's crucial to update this dependency as well. I've also added a medium-severity suggestion on the requirements.txt file to make the pyzmq dependency explicit, based on warnings in the PR description.

[gemini-code-assist]

The Snyk PR description includes a warning that pyzmq is not installed, which is a required dependency for jupyterlab. While pip will install it as a transitive dependency, it's good practice to make such dependencies explicit for better clarity and to resolve warnings from dependency analysis tools. Please consider adding pyzmq to this file with an appropriate version.