B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
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May 19, 2026 - Nextflow
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immcantation
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A three-part R tutorial for single-cell BCR sequence processing and integration with gene expression data, using Immcantation and Seurat
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May 21, 2026 - HTML
TyCHE is a Bayesian phylogenetics BEAST2 package that infers time trees of populations with distinct evolutionary rates.
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Apr 23, 2026 - Java
Code and scripts used for Worth et al. 2022: "Receptor editing constrains development of phosphatidyl choline-specific B cells in VH12-transgenic mice".
r ngs immunology rep-seq ngs-analysis vdj-recombination ngs-pipeline b-cell immcantation transgene b-cell-receptor mus-musculus
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May 24, 2022 - R
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