BioLockJ-Dev-Team
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BioLockJ
BioLockJ PublicForked from msioda/BioLockJ
BioLockJ is an automated metagenomics pipeline for WGS/16s sequence analysis. The extensible Java framework writes/executes bash scripts to call external applications via BioModule interface. BioM…
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sheepdog_testing_suite
sheepdog_testing_suite PublicTest suite for BioLockJ development team.
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blj_ext_modules
blj_ext_modules PublicAdditional modules that run as part of BioLockJ but are not part of the base program
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Reproducing_Research
Reproducing_Research PublicPublished research configured as BioLockJ pipelines
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Repositories
- BioLockJ Public Forked from msioda/BioLockJ
BioLockJ is an automated metagenomics pipeline for WGS/16s sequence analysis. The extensible Java framework writes/executes bash scripts to call external applications via BioModule interface. BioModules perform sequence processing, taxonomy assignment, univariate modelling, and report generation.
BioLockJ-Dev-Team/BioLockJ’s past year of commit activity - FastQC Public
BioLockJ-Dev-Team/FastQC’s past year of commit activity - blj_ext_modules Public
Additional modules that run as part of BioLockJ but are not part of the base program
BioLockJ-Dev-Team/blj_ext_modules’s past year of commit activity - ShowTestVar Public template
An example of a BioLockJ module. It prints the current value of an environment variable.
BioLockJ-Dev-Team/ShowTestVar’s past year of commit activity - BioLockR Public
R package - the official R wrappers to interact with the BioLockJ java program from an R session.
BioLockJ-Dev-Team/BioLockR’s past year of commit activity
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