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Document new metric-slot keys for search-space detection artifacts Build and Push Docker Image #22: Commit d4bf625 pushed by baynec2
2m 57s develop
develop
2m 57s
Merge pull request #15 from baynec2/feature/aggregation-on-demand Build and Push Docker Image #21: Commit 920b45f pushed by baynec2
2m 34s develop
develop
2m 34s
calc_taxon_fdr: return n_unique_peptides_all per (taxon, decoy) group Build and Push Docker Image #20: Commit 863d413 pushed by baynec2
2m 32s develop
develop
2m 32s
extract_fasta_info: parse protein_id from UniParc (UPI*) headers Build and Push Docker Image #19: Commit 9748bbd pushed by baynec2
3m 1s develop
develop
3m 1s
get_kegg_in_batches: return empty-but-schemaed tibble on null fetch Build and Push Docker Image #18: Commit 136dbe9 pushed by baynec2
2m 41s develop
develop
2m 41s
Regenerate NAMESPACE and get_fasta_file docs Build and Push Docker Image #17: Commit e70c777 pushed by baynec2
2m 59s develop
develop
2m 59s
Compute LCA at peptide level from Protein.Ids Build and Push Docker Image #16: Commit e1783b2 pushed by baynec2
2m 43s develop
develop
2m 43s
Fix plot_taxa_tree dropping empty Rplots.pdf in cwd Build and Push Docker Image #15: Commit 8a3ec48 pushed by baynec2
2m 51s develop
develop
2m 51s
Drop organism_type column from test fixture and example taxonomy.txt Build and Push Docker Image #14: Commit 96b35ca pushed by baynec2
2m 46s develop
develop
2m 46s
Skip aggregation for ranks with all-NA values in add_taxonomy_to_qf Build and Push Docker Image #13: Commit 0ae9adc pushed by baynec2
2m 41s develop
develop
2m 41s
Fix concatenate_fasta_files crash on large proteome sets Build and Push Docker Image #12: Commit 830d303 pushed by baynec2
2m 50s develop
develop
2m 50s
Add retry logic with exponential backoff to get_fasta_file Build and Push Docker Image #11: Commit a435416 pushed by baynec2
2m 49s develop
develop
2m 49s
chore: remove temp FASTA files Build and Push Docker Image #10: Commit 0ccee49 pushed by baynec2
2m 36s develop
develop
2m 36s
chore: untrack tests/testthat/.DS_Store Build and Push Docker Image #9: Commit e97b21a pushed by baynec2
2m 47s develop
develop
2m 47s
Fix log_with_timestamp crash when message contains % characters Build and Push Docker Image #8: Commit 5412eb1 pushed by baynec2
2m 46s develop
develop
2m 46s
fix: qualify rowData() calls with SummarizedExperiment:: namespace in… Build and Push Docker Image #7: Commit f0dbc03 pushed by baynec2
2m 44s develop
develop
2m 44s
docs: export calc_taxon_fdr, plot_ma, plot_upset and regenerate docs Build and Push Docker Image #6: Commit 0aed251 pushed by baynec2
2m 34s develop
develop
2m 34s
Add calc_taxon_fdr, plot_ma, and plot_upset Build and Push Docker Image #5: Commit befddeb pushed by baynec2
2m 37s develop
develop
2m 37s
fix: switch base image to bioconductor/bioconductor_docker:3.22 Build and Push Docker Image #4: Commit 5426bc0 pushed by baynec2
9m 4s develop
develop
9m 4s
ci: improve Docker build and add develop branch publishing Build and Push Docker Image #3: Commit 8a8960e pushed by baynec2
22s develop
develop
22s
Merge pull request #13 from baynec2/organism_type_refactor R-CMD-check #19: Commit 7af9d93 pushed by baynec2
31m 33s main
main
31m 33s
Merge pull request #13 from baynec2/organism_type_refactor Build and Push Docker Image #2: Commit 7af9d93 pushed by baynec2
27s main
main
27s
Merge pull request #13 from baynec2/organism_type_refactor test-coverage #19: Commit 7af9d93 pushed by baynec2
29m 25s main
main
29m 25s
Remove organism_type column from taxonomy pipeline R-CMD-check #18: Pull request #13 opened by baynec2
28m 11s organism_type_refactor
organism_type_refactor
28m 11s
Remove organism_type column from taxonomy pipeline test-coverage #18: Pull request #13 opened by baynec2
30m 0s organism_type_refactor
organism_type_refactor
30m 0s